LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr9g0348	ATGGAGAAGATCTGTGTCGCGGTTCGACTTCGCCCTCCAGTTTCCGAAGACTCTGTCGTCGGAACCTTCTGGAAGGTTGAAGATAACCGCATCTCTCTTCACAAGATCCATGGCACTCCACTCTCTTCCTCGTCTTACGCTTTCGATCGTATATTCGACGAAAGTAGTAGCAATGCCAGTGTCTACCACCACCTCACCAACGATATCATTCATGCCGCGCTCGACGGCTTCAACGGAACTGCATTTGCGTACGGGCAGACTAGTAGTGGGAAGACTTTCACCATGAACGGTTCCGAAACTGACCCGGGAGTGATTCCTCGGGCAGTTAGAGACATATTTACGAGAATTGAAACGATGTCTGATCGAGAGTTTCTAATACGAGTTTCGTACATGGAGATCTACAACGAAGAAATTAATGACCTTCTTGCAGTTGAAAATCAGAAATTGCAAATTCATGAGAGTTTGGAGCGTGGAGTATTTGTTGCAGGGCTGCGAGAGGAAATTGTAAATAATGCTGAACAGGTGTTGAATCTCATTAAAGCAGGGGAAGTTAACAGGCACTTTGGTGAGACAAATATGAATGTAAGGAGTAGCAGGTCACATACAATATTTAGAATGGTGATTGAAAGCAAAGGGAAGCATTCCAATTCTTCCAATGATTGTTCAATTAGTGATGTTGTTCGAGTTTCAGTCTTGAATTTAGTAGATCTAGCTGGCTCTGAAAGGATTGCAAAGACTGGAGCTGATGGAGTACGTTTAAAAGAAGGAAAATATATTAACAAGAGCTTGATGGTTTTGGGAAACGTTATTAACAAATTAAGTGAGGGTTCGAAGCAAAGGGGGCATATCCCGTATCGTGACAGTAAATTAACTCGTATTCTGCAACCTGCTCTTGGTGGTAACGCTAAAACGTCCATTATTTGCACCATAGCACCAGAAGAGATTCACGTTGAAGAAACAAAGGGAACTCTTCAGTTTGCGAGTAGAGCCAAACGCATCACAAATTGTGCTCAAGTGAATGAGATATTGACGGATTCAGCCTTGCTAAAGCGGCAACAGTTAGAGATAGAGGAGCTACGTAAGAAGCTTCAGGGATCCCATGCTGAGGTGCTCGAGCAAGAGATTCTTAAACTCAGGAACGATTTGCTCAAGTATGAAATGGAGCGTGGGAAGCTTGAAATGGAACTGGAAGAGGAGAGGAAATCACGTGATCAATGGATTAGGGAGCAACGGATGAAAATTGAAAATTCCAATACTAAATCTTTATCAGACTGTGGGACGAATGACAGTCAGGGACCGGGATTTTTGAGGCCCAGGTTGACAGAAGAATACAGTGACATTAATAGTGCATCTCAAGAGGATATTTTTAAATCTCCTTGTTTTAAAGCAGCTCCCAATTCTTTTGTTGCCAAGAGATCAAATTATTCATCATTGCCAGATTATAGCCCCCTTCCAGATGCTTTCAGCAATGTAGCTGATGAAGATATGTGGTTGAAAATGAATAATGGTTATGTTGCAGACCTTGATTCCCTTCAAACTACTCCCACTCGGCAAGTTCAGTCCTTCCCACCAAGTGATGCAACTGCTTGTTGTACAGGTGAGATTGAGAAGTATGAACGAGAGGTTCAAGACTTGAGAAGACAATTGGAGCTTGCAAATGAAAGAATAAATGAACTCGAGCAAAATCATTCAGAGGAATTACCATCAAGCAAGCAATTAATGGGTGGGACACCTAAACATCAAGAAACACGACTAATTCATGAATTGCCTCTGAGGTCATCTGAATCTGTGGAGAACTTCAAAGATAGCTTTGAGGAGGTTTTGTCAGTAATGCAGAGATTTGCATCTGGTGGCAAATTATCGACTGCGACGATGCTTTCAACCATGAGTGAAATTGGAGCACAGTTATTTGCAACTTTGGAAGCTCACTTTGCAACGAATGTGGGTAGTGAAAGGTCTTCCACCGGGAACTGTGCTTTAATCGGTGAACAACAAAAAGTGTTTCATGAGAGGATGAACAATATAATTGCATCACTGGAGTTATCTGAAAGCCCAACAACAGGAGAGGAGAGGATACATTTGTGCAGCTGTGAACACAAGGGCTCTGGTTTGGGAGGAGAAACCGCTTACTCAAAGGAGGATTTAAATGAAAGATGTGAAAGCCTGGAAAGGGAAGTACTACTTTTGAAGGACGAAAAAGACTCTTTGCTGCAGAAGTTCTTTGAATCATCCGAGAAACTAGCAATGGTTTCCAGCCAAAAGGAAAATGCCTTGAAAGATTTAAATACTGAAGTACATAGAAGGAAAAATCTAGAAGGAGAGGTTAAGCAGTTTACTGCAGCTTTTGCCAGTCGTCAGAAATCATTCATTTCCTTCCATAGTGACCTTAAGACCAAAATTGAGCAATTCAGAGCCCAGACTCCAATCTCAGTGCCAAAATCTCCTGGGTTACAGGATTAG	2460	0.422	MEKICVAVRLRPPVSEDSVVGTFWKVEDNRISLHKIHGTPLSSSSYAFDRIFDESSSNASVYHHLTNDIIHAALDGFNGTAFAYGQTSSGKTFTMNGSETDPGVIPRAVRDIFTRIETMSDREFLIRVSYMEIYNEEINDLLAVENQKLQIHESLERGVFVAGLREEIVNNAEQVLNLIKAGEVNRHFGETNMNVRSSRSHTIFRMVIESKGKHSNSSNDCSISDVVRVSVLNLVDLAGSERIAKTGADGVRLKEGKYINKSLMVLGNVINKLSEGSKQRGHIPYRDSKLTRILQPALGGNAKTSIICTIAPEEIHVEETKGTLQFASRAKRITNCAQVNEILTDSALLKRQQLEIEELRKKLQGSHAEVLEQEILKLRNDLLKYEMERGKLEMELEEERKSRDQWIREQRMKIENSNTKSLSDCGTNDSQGPGFLRPRLTEEYSDINSASQEDIFKSPCFKAAPNSFVAKRSNYSSLPDYSPLPDAFSNVADEDMWLKMNNGYVADLDSLQTTPTRQVQSFPPSDATACCTGEIEKYEREVQDLRRQLELANERINELEQNHSEELPSSKQLMGGTPKHQETRLIHELPLRSSESVENFKDSFEEVLSVMQRFASGGKLSTATMLSTMSEIGAQLFATLEAHFATNVGSERSSTGNCALIGEQQKVFHERMNNIIASLELSESPTTGEERIHLCSCEHKGSGLGGETAYSKEDLNERCESLEREVLLLKDEKDSLLQKFFESSEKLAMVSSQKENALKDLNTEVHRRKNLEGEVKQFTAAFASRQKSFISFHSDLKTKIEQFRAQTPISVPKSPGLQD*	820

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr9g0348	819	Coils	Coil	712	739	-	-
	Apr9g0348	819	Gene3D	Kinesin motor domain	1	365	IPR036961	-
	Apr9g0348	819	PANTHER	CENTROMERE PROTEIN E	2	803	-	-
	Apr9g0348	819	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	3	365	IPR027417	-
	Apr9g0348	819	SMART	kinesin_4	1	341	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Apr9g0348	819	ProSiteProfiles	Kinesin motor domain profile.	3	333	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Apr9g0348	819	PRINTS	Kinesin heavy chain signature	76	97	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Apr9g0348	819	PRINTS	Kinesin heavy chain signature	191	208	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Apr9g0348	819	PRINTS	Kinesin heavy chain signature	231	249	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Apr9g0348	819	PRINTS	Kinesin heavy chain signature	283	304	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Apr9g0348	819	ProSitePatterns	Kinesin motor domain signature.	230	241	IPR019821	GO:0003777\|GO:0005524\|GO:0007018
	Apr9g0348	819	Pfam	Kinesin motor domain	31	333	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Apr9g0348	819	CDD	KISc_CENP_E	3	333	-	-
	Apr9g0348	819	Coils	Coil	349	409	-	-
	Apr9g0348	819	Coils	Coil	528	566	-	-
	Apr9g0348	819	PANTHER	CENTROMERE PROTEIN E	2	803	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr9g0348	Apr-Chr9	4667348	4674179	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr9g0348	2	395	Miscellaneous Gene Families	AT2G21380	44.250	5.27e-92	310

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr9g0348	K11498		-	gmx:100804944	1310.43

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr9g0348	9	4667348	4674179	Apr9g0348	9	4667348	4674179	ECH