Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0343 ATGGATCTTGGGGTGGTGGGTTTGGATGGGTTGGTGGGTTCAGACACTTGTGGGTTTGGTTCTCTTGCTTCAGATCCTGAGACAAAGCACAACAAGTGGTACGGATCTGGGTTGCTCAAGCAAGAGAGATCTAGCACTACTGAAGATGAGTGGAGGAGTTCAAAGTTGCTCAAAACTGATGAAATATCTCCCTCCAAAGCAATGTTGTTTCACCAGAGGAACTCTTTACTGAGATCTAATGCCACTCTCTTTTCGGATGGACATCACCAACAACATATGCTTAGCTTCTCTTCTCCAAAACCAGACTCTTTTTTGGGAGACAAGGCCCCCCCAAATGCCACATTACCTTATTCTTACCATCCGTTGTCTAGTTACAGCAGAAATACAGGTTACGGTTCTGGAAGCATGCATGGGGCTTTCAGTGGTGCTAAAGGGCCATTCACTCCATCTCAGTGGATGGAGCTTGAACACCAGGCCTTGATCTACAAGTACATCACAGCAAACGTGCCTGTACCTTCTCATCTTCTCATTCCCATTAGAAAAGCACTTGATTCTGCTGCCTTCTGCAACTTCTCAAACGGGCTTCTCAGACCCAATGCATTGGCATGGGGAGGTTTTCATCTGGGATACTCGAACAACACTGATCCTGAGCCAGGAAGGTGTAGGAGAACAGATGGTAAGAAATGGCGATGCTCAAGAGATGCTGTTGTGGATCAAAAGTATTGTGAACGACACATCAATAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCCTTACCAACCCCACCACCACCACCACTTCTACTCCTAATACTTCTTCTAAGCTCAATGCTTCCTCCTCCGTTGTGGTGCCTCACCAAGAACCCAGTAATAATATGCATCTTCCACCTCATTCCTCTCCCCCCAACTCCATCAATAGGATGTTTATGAGTAACAAAGAGAACAATAACACAAGTGAGAGGGTGCAGGATGGTCCTGCACTTCCAATGCTACCTCCAACTCTTGAGCTGAAACCGAAGGAGAACCCTTTCATGATTCATAAACAGAAACTCCCGTATGATGAATCCTCAAAGAACAACAATGAGTTTGGGCTTGTCACTTCTGATTCCTTGCTTAACCCTTCACAGAAAAATAGCACCACCACATTGCTCAGTAACAGAAGCTTTGGTTCTTCACAAAAGGATTCTGAGTCCCAACATTCCCTTAGGCATTTCATTGATGAATCGGACATGCAATCAGATAGGACTCAGCTATCAATTTCCATACCAATATCTTCCTCAGACTTCATGTCATTCACTACTTCCTCACCCTCCAATGAAAAACTCACTTTGTCACCACTAAGGCTGTCAAGGGAATTAGACCCTATTCAAATGGGTTTAGGAGTTGGAAGTGGTCTCAATGAATCAACCACTAGGCAAGCTAATTGGATTCCAATCACTTGGGAGAGTTCTTCTATGGGTGGTCCTCTTGGAGAGGTTTTGAATCTTAGTAGTAGCAATAACAGCAATGCAAGTGATCATTGTGGGAAAAACACTTCCGCTCTCAACCTCATGACTGACGGGTGGGACAGTAGTCCTCCACTAGGTTCATCTCCAACTGGGGTGTTGCAAAAGACCGCTTTTGGATCACTTTCTAATAGCAGCGCTGGAAGCAGTCCAAGGGCTGAGAACAACAAAGAAGGTGCTACCTTGTGCAATGACCTCTTACCGGCCTTGTAA 1737 0.456 MDLGVVGLDGLVGSDTCGFGSLASDPETKHNKWYGSGLLKQERSSTTEDEWRSSKLLKTDEISPSKAMLFHQRNSLLRSNATLFSDGHHQQHMLSFSSPKPDSFLGDKAPPNATLPYSYHPLSSYSRNTGYGSGSMHGAFSGAKGPFTPSQWMELEHQALIYKYITANVPVPSHLLIPIRKALDSAAFCNFSNGLLRPNALAWGGFHLGYSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHINRGRHRSRKPVEGQSGHALTNPTTTTTSTPNTSSKLNASSSVVVPHQEPSNNMHLPPHSSPPNSINRMFMSNKENNNTSERVQDGPALPMLPPTLELKPKENPFMIHKQKLPYDESSKNNNEFGLVTSDSLLNPSQKNSTTTLLSNRSFGSSQKDSESQHSLRHFIDESDMQSDRTQLSISIPISSSDFMSFTTSSPSNEKLTLSPLRLSRELDPIQMGLGVGSGLNESTTRQANWIPITWESSSMGGPLGEVLNLSSSNNSNASDHCGKNTSALNLMTDGWDSSPPLGSSPTGVLQKTAFGSLSNSSAGSSPRAENNKEGATLCNDLLPAL* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0343 578 MobiDBLite consensus disorder prediction 524 578 - -
Apr9g0343 578 Pfam WRC 216 258 IPR014977 -
Apr9g0343 578 MobiDBLite consensus disorder prediction 246 309 - -
Apr9g0343 578 MobiDBLite consensus disorder prediction 260 309 - -
Apr9g0343 578 ProSiteProfiles QLQ domain profile. 146 181 IPR014978 GO:0005524|GO:0005634|GO:0006355
Apr9g0343 578 MobiDBLite consensus disorder prediction 370 406 - -
Apr9g0343 578 PANTHER GROWTH-REGULATING FACTOR 9 25 567 - -
Apr9g0343 578 MobiDBLite consensus disorder prediction 370 402 - -
Apr9g0343 578 PANTHER - 25 567 IPR031137 GO:0005634|GO:0006351|GO:0032502
Apr9g0343 578 SMART QLQ_2 145 181 IPR014978 GO:0005524|GO:0005634|GO:0006355
Apr9g0343 578 ProSiteProfiles WRC domain profile. 215 259 IPR014977 -
Apr9g0343 578 MobiDBLite consensus disorder prediction 524 565 - -
Apr9g0343 578 Pfam QLQ 146 180 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0343 Apr-Chr9 4611229 4616074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0343 1 548 GRF Transcription Factor Family AT2G22840 42.832 3.30e-107 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Apr9g0343 WRC 9.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0343 - - gmx:100818860 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0343 9 4611229 4616074 Apr9g0343 9 4611229 4616074 ECH