Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0336 ATGAAGGAAGACGGAGGTGATCGGAACGAAGAGAAAGCACATGATATCAAGCTTTGGGGAGTTTTCCTCTTCGGCTTGATTAGCGCCACCGTTATCACCTTCTCTATGTCCAGATCGCAGTCTTCGTGGAAAGGAGGGAGTGGAAGTTCTTTCCGATCAGCTTTTCAAGAAGAAGCATGGAAGAGGTACAATAAGCGATTACAAGAGGAGTACGAGGAGGAGATGGAGAGAGTGGAACGAATAAGGCGGATGCAAAGTGTGTTTAATAGAGAAAGGGATAAGTATAGAAGAAGCTATGAGAGCTGGACGGAAAATGGTCACGGTGCATATCAACAGAATTTCCAAAGAGATGATTGGTATTGGAAGGCCGAAGCATCCTTCAGAGAGCACTGGGCCAATTATCAACACACTCCAAGACAGAGTGGAAACTATTCCTTATCACATCACTACTCTGTTTTGGGTCTTGACAGGTTTAGGACAACGCCATATACAGATGCTGAGATTAAGACAGCATTTAGGACCAAGGCAAAGCAGTATCATCCTGACCAGAACCAAGATAATAGAGAGGCTGCTGAGGCTAAGTTCAAAGAAGTAATTTGTTCATATGAGGCCATACAAAAGGAAAGAAAGAACCAGAATCTGTAA 645 0.4372 MKEDGGDRNEEKAHDIKLWGVFLFGLISATVITFSMSRSQSSWKGGSGSSFRSAFQEEAWKRYNKRLQEEYEEEMERVERIRRMQSVFNRERDKYRRSYESWTENGHGAYQQNFQRDDWYWKAEASFREHWANYQHTPRQSGNYSLSHHYSVLGLDRFRTTPYTDAEIKTAFRTKAKQYHPDQNQDNREAAEAKFKEVICSYEAIQKERKNQNL* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0336 214 PRINTS DnaJ domain signature 172 187 IPR001623 -
Apr9g0336 214 PRINTS DnaJ domain signature 190 210 IPR001623 -
Apr9g0336 214 Gene3D DnaJ domain 141 214 IPR036869 -
Apr9g0336 214 Pfam DnaJ domain 149 212 IPR001623 -
Apr9g0336 214 SMART dnaj_3 147 210 IPR001623 -
Apr9g0336 214 CDD DnaJ 149 198 IPR001623 -
Apr9g0336 214 ProSiteProfiles dnaJ domain profile. 148 210 IPR001623 -
Apr9g0336 214 PANTHER HEAT SHOCK PROTEIN-BINDING PROTEIN 1 214 - -
Apr9g0336 214 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 214 - -
Apr9g0336 214 Coils Coil 57 84 - -
Apr9g0336 214 SUPERFAMILY Chaperone J-domain 147 212 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0336 Apr-Chr9 4495996 4503730 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0336 - - gmx:100804936 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0336 9 4495996 4503730 Apr9g0336 9 4495996 4503730 ECH
Apr9g0336 9 4495996 4503730 Apr5g1433 5 18404081 18408505 PCT