Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0333 ATGGACATTGCTGCTCTTTTAACTTCGGCTGGCATTAATATTGCTGTGTGTGTGGTGCTCTTTTCATTTTATTCTGTATTAAGAAAACAACCCAGCAATGTTAATGTGTACTTTGGGCGGAGACTAGCCTCTCAGCATTCAAGACGCATTGATCTCTGCTTGGATAGATTTGTTCCCTCCCCTAGCTGGATAGTAAAAGCATGGGAAACGACTGAGGATGAGATACTGGCTATTGGTGGCTTGGATGCCGTGGTTTTTGTGAGGATGGTTGTGTTCAGGCTTTGGGCTCATTGTCTCGCACTATACATCATAACATTCTCAGCTTGTACTCTTCTTTACTTTGAATATGAGAGCATCACTAAATTGAGGTTACTACATATTATTGGATCACCTCCAAATCCAAGTCATTTTACAATTCTTGTTCGATCAATTCCCTGGTCTTCAGAAAAATCATACTGTGAAATGGTGGAACAATTCTTTTCATATTACCATGCATCAACATATTTGTCGCACCGACTGATTTATAAGTCTGGTACAGTTCAAAAAATAAAGGATGATGCTGAACTTGTGTGCCAGGTACTTAGAGCTGGTTCATTGGAAAATACTTGCAAGCCTTGTTTTATGCAATGCTGCTACTCTGTACCACTCACAAATTCTTTTAAGAAGATTTCTGATGAGATGGACTGTAAGCATGAGAGAACGGGCTATACTGACGTGCATTTGGATTCAAGAAAAAAGGAATGTGCTGCTGCTTTTGTGTTCTTTAAAAGCCGGTATGCTGCTCTTCTGGCTGCACAGATACTGCAAACATCAAATCCTATGTTATGGGTGACAGATGTAGCCCCGGAGCCACACGATGTTTATTGGTCCAATATTTGCATACCATATAGGCAACTTTGGATCCTTCCACCCATGATGATGCTATTTTCAGCAGTGGAGGGTTCTATTTCCCGTAGTGGAAGGAAGAAGAGTGCATGTTGTAAAGTCTTGTACTTCACAATCTGGAACGTGTTTTTTGTTAATGTATTTACTGGTTCCGTTATCAGTCAACTCTCTGTCTTTTCTAGCGTAACAGATTTGCCTGCCCAACTTGCCAAGGCAGTCCCAGCGCAGGCTACCTTCTTCACAACTTACGTTTTATCATCCGGTTGGGCAAGTTTGGCATGTGAAGTTATACAAATTTTTCCTCTTCTATGCAACGTTTTCCGGAGATTCCTACTTTGGTTTAAGGATGATGAACTGGAGGGCAGCCTATCTTTTCCGTACCATACAGAGGTTCCAAGAATTTTACTGTTTGGATTCCTTGGGTTCACCTGTTCTATTCTGGCACCCCTAATGTTGCCCTTCTTGTTGATCTACTTTTGCCTTGCTTACCTTGTTTACCGAAACCAGATTATCAACGTATACGTTACAAAATACGATGGCGGGGGACAGTACTGGCCCATTGCCCACAACACGACAGTCTTTTCATTGCTACTTGCTCAACTTATCGCGCTAGGAGTGTTTGGACTTAAACGCTCATCAGTTGCATCTGGATTCACCATTCCATTGCTGATTTGTACCCTCTTATTTCACCAGTATTGTAGACAACGATTTCTCCCAGTATTTAAGAGCAATTCAGCACAGACTCTCATTGACATGGATCGGAAAGATGAGCACTGTGGAAGGATGAAAGAGATTTATGAACAATTGCGTTCATGTTACAACCAGTTCAGTTTGATGCCACATACCTTAACACAAGCCGAATGCTCCAATGAGTCCAATCATCACGATGACAAGGGGAGTTCTCAATCTTCACAAGATATGGAGAAAGGCAAGGAAATTATTCAAAAAGATAGATCATGGCCCGCTCCACGCACAATGAGTATAGGTTCGGATAAAGCGGTAGTTGGTGTGTTATGA 1902 0.4175 MDIAALLTSAGINIAVCVVLFSFYSVLRKQPSNVNVYFGRRLASQHSRRIDLCLDRFVPSPSWIVKAWETTEDEILAIGGLDAVVFVRMVVFRLWAHCLALYIITFSACTLLYFEYESITKLRLLHIIGSPPNPSHFTILVRSIPWSSEKSYCEMVEQFFSYYHASTYLSHRLIYKSGTVQKIKDDAELVCQVLRAGSLENTCKPCFMQCCYSVPLTNSFKKISDEMDCKHERTGYTDVHLDSRKKECAAAFVFFKSRYAALLAAQILQTSNPMLWVTDVAPEPHDVYWSNICIPYRQLWILPPMMMLFSAVEGSISRSGRKKSACCKVLYFTIWNVFFVNVFTGSVISQLSVFSSVTDLPAQLAKAVPAQATFFTTYVLSSGWASLACEVIQIFPLLCNVFRRFLLWFKDDELEGSLSFPYHTEVPRILLFGFLGFTCSILAPLMLPFLLIYFCLAYLVYRNQIINVYVTKYDGGGQYWPIAHNTTVFSLLLAQLIALGVFGLKRSSVASGFTIPLLICTLLFHQYCRQRFLPVFKSNSAQTLIDMDRKDEHCGRMKEIYEQLRSCYNQFSLMPHTLTQAECSNESNHHDDKGSSQSSQDMEKGKEIIQKDRSWPAPRTMSIGSDKAVVGVL* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0333 633 Pfam Late exocytosis, associated with Golgi transport 6 91 IPR032880 -
Apr9g0333 633 MobiDBLite consensus disorder prediction 582 633 - -
Apr9g0333 633 MobiDBLite consensus disorder prediction 585 613 - -
Apr9g0333 633 PANTHER ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN 94 301 - -
Apr9g0333 633 PANTHER ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN 2 94 - -
Apr9g0333 633 PANTHER ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN 302 616 - -
Apr9g0333 633 Pfam Cytosolic domain of 10TM putative phosphate transporter 136 291 IPR027815 -
Apr9g0333 633 Pfam Calcium-dependent channel, 7TM region, putative phosphate 300 502 IPR003864 GO:0016020
Apr9g0333 633 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 2 94 IPR045122 GO:0005227
Apr9g0333 633 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 94 301 IPR045122 GO:0005227
Apr9g0333 633 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 302 616 IPR045122 GO:0005227
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0333 Apr-Chr9 4470307 4481383 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0333 K21989 - ini:109152680 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0333 9 4470307 4481383 Apr9g0333 9 4470307 4481383 ECH
Apr9g0333 9 4470307 4481383 Apr5g1430 5 18371853 18380619 PCT