Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0325 ATGGCTTCTTCTCTTCCCTCTTATTTCACACACCTTCCTCTTCCTTCACTTTCAACCTCTCACTCAGGTGAGAAGCGCGTGGATGACGATGAATCGCGCGTTCCGATTCACATCGTGACCGTCGCGTCTCAACTTCCCGTTGAATTTTTGGAACCCTCGCCGCAATCGCAGCTTGTTATTGGTTTTGACTGCGAGGGTGTTGACTTGTGTCGCCATGGCACTCTCTGCGTAATGCAGCTTGCATTTCGTGATGCTGTATACCTGGTTGATGCAATTGAAGGGGGAGAGGAGCTTATCAAAGCCTGTAAGCCTGCACTCGAGTCTAATTACATCACAAAAGTGATTCATGATTGCAAACGGGATAGTGAGGCATTGTACTTCCAGTTTGGCATCAAGTTGAACAATGTGGTGGATACCCAGATTGCTTATTCACTTATAGAGGAGCAAGAAGGACGAAAGAGACTTCCAGATGACTACATTTCGTTTGTTGGTCTCCTTGCAGATACACGTTATTGTGGTACTGTGCGTCGTCGCATATCATATCTTGAGAAGGAAGAAGTTCGTGTCCTCCTTCGACAGGACCCCATGTTTTGGACATACAGACCTTTATCTGAACAGATGGTCCGTGCCGCTGCTGATGATGTTCGTTTTCTTCTCTTCATCTATCACCAAATGATGGAGAAATTAAATGAGCAGTCTTTATGGTATCTTGCAGTTCGTGGTGCCTTGTATTGCCGATGTTTCTGTGTGAACAGCAATGATTATGCAGATTGGCCATCTCTACCTCCAATTCCAGATAAGCTTAAAGTTGATGGAAATGGTCCTGAGGAAGAAATTCTTTCAGTTCTTGATGTTCCACCAGGAAAGATGGGACGTGTTATTGGGAAAAAAGGGGCGACAATTTTGTCAATTAAGGATTCTTGCAATGCGGAAATTCTCATTGGAGGTGCCAAGGGCCCACCTGACAAGGTCTTCATCATGGGACCAGTGAAGCAGGTGAGAAAAGCCGAGGCCATGTTACGAGGTAGAATCTTGGATATGTAG 1044 0.455 MASSLPSYFTHLPLPSLSTSHSGEKRVDDDESRVPIHIVTVASQLPVEFLEPSPQSQLVIGFDCEGVDLCRHGTLCVMQLAFRDAVYLVDAIEGGEELIKACKPALESNYITKVIHDCKRDSEALYFQFGIKLNNVVDTQIAYSLIEEQEGRKRLPDDYISFVGLLADTRYCGTVRRRISYLEKEEVRVLLRQDPMFWTYRPLSEQMVRAAADDVRFLLFIYHQMMEKLNEQSLWYLAVRGALYCRCFCVNSNDYADWPSLPPIPDKLKVDGNGPEEEILSVLDVPPGKMGRVIGKKGATILSIKDSCNAEILIGGAKGPPDKVFIMGPVKQVRKAEAMLRGRILDM* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0325 347 CDD Egl_like_exo 49 249 - -
Apr9g0325 347 PANTHER EGALITARIAN, ISOFORM B 8 345 - -
Apr9g0325 347 Pfam KH domain 283 341 IPR004088 GO:0003723
Apr9g0325 347 SMART kh_6 277 345 IPR004087 GO:0003676
Apr9g0325 347 SUPERFAMILY Ribonuclease H-like 31 258 IPR012337 -
Apr9g0325 347 ProSiteProfiles Type-1 KH domain profile. 278 340 - -
Apr9g0325 347 Gene3D - 9 246 IPR036397 GO:0003676
Apr9g0325 347 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 273 345 IPR036612 GO:0003723
Apr9g0325 347 SMART 35exoneu6 36 230 IPR002562 GO:0003676|GO:0006139|GO:0008408
Apr9g0325 347 CDD KH-I 283 340 - -
Apr9g0325 347 PANTHER - 8 345 - -
Apr9g0325 347 Gene3D K Homology domain, type 1 268 345 IPR036612 GO:0003723
Apr9g0325 347 Pfam 3'-5' exonuclease 55 229 IPR002562 GO:0003676|GO:0006139|GO:0008408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0325 K18740 - gmx:100788577 583.563