Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1437 ATGAAGGCCATGAATGACAGTAACAACGATGATGGAAACAATCATAACTGGTTGGGGTTCTCTCTTTCACCCCAAATGAAAATGGAGGTTACTTCTGGTCCTCCACAACATCATCATCATCATCACTACCAAGCCCAGGCTTCTGCATCTGCCACTATTTCTAACACTATTCCCACAACCTTTTACTTATCCTCTTCTCACCTAGGCAACTCCGGAATCTGTTATGGCGTTGGAGAAAATAGTAACTTCCATTCTCCTTTGACTGTAATGCCTCTCAAGTCAGATGGGTCACTTTGTATCATGGAAGCTCTCGGTAGATCACAAACGCAAGTGATGGTGCCAACTTCATCACCAAAACTGGAAGACTTTCTAGGTGGTGCAACTATGGGAACTCACGAATATGGAGGGCATGAAAGAGGGGAAACAATGGCTCTGAGCCTAGACAGCATCTATTACAACACCCAAAATGCAGAAGCACAACCCAACAGAGATCATTCACTGGACCTTCTTTCAGAACCCTTCAGGCAACAAGGGCACATGAATGTCCAATCACATCCTTATTATTCTTCAGGACTCGCTTGCCATGGGATATATCAAACGCCGATAGAGGAAGAAACAAAGGAAACTCAAGTTGCAGTTTGCAGCACCCAAATGCCTCAAATGACAGAAGAAGGCTTGAAAAACTGGGTGGCTCCAAGGGAGTATTCTGCTCAGCTGGCTCTGGAGCAGCAAATGAACTGTGGCACAGGGAATGATCGTGTGTCTCTTGGAACAGTAGGGTGTGGGGAGTTACAGTCACTAAGCTTGTCTATGAGTCCTGGTTCTCAGTCTAGTTGTGTCACTGCTCCTTCTGGGACAGACTCGGTGGCTATGGATGCAAAAAAGAGAGGCCATGCTAAGCTGGGTCAGAAGCAGCCAGTGCATAGGAAATCCATTGACACATTTGGACAGAGAACATCTCAGTATAGAGGCGTGACAAGGCATAGATGGACTGGTAGATATGAAGCGCATTTGTGGGATAACAGTTGCAAGAAGGAGGGGCAGACTAGGAAAGGAAGACAAGTATATTTGGGGGGTTACGATATGGAAGAGAAAGCTGCAAGGGCCTATGATCTTGCAGCCCTTAAGTACTGGGGACCTTCAACGCATATTAATTTCCCGTTAGAAAATTACCAAGCCGAACTTGAAGAAATGAAGAATATGACTAGGCAGGAATACGTTGCCCACTTGAGGAGAAAAAGCAGCGGATTTTCAAGGGGTGCTTCAATGTACAGAGGGGTCACAAGGCACCACCAACATGGAAGATGGCAAGCAAGGATAGGCAGAGTTGCTGGGAACAAAGACCTTTACCTTGGAACATTCAGTACTCAAGAGGAAGCAGCTGAAGCATATGATGTAGCTGCAATAAAGTTCCGTGGGGTAAGTGCAGTCACAAACTTTGATATATCAAGATACGATGTTGAAAGGATCATGGCCAGTAATACTCTACTTGCTGGGGAGCTGGCAAGGCGAAACAAAGATAGTGATCTAAGAACAGAAGCCATTGACTATAATATTGGTGTAACAAGCCAGAACAATGTGGATGCGGTTCAAGCTAGAAACAACAATGAGAAAGATTCACAGTGGAAAATGGCTTTGTTCAACCACCATTCACAGCAACAGTCAAATGGGTGTGACCAAAAAACCATTAACTGCGGAAATTATAGAAACTCTGCACTCTCTGTGGCCCTACAAGATCTCATTGGGATTGATTCAGCGGGTTCTGGCCAGCCCATGTTGGATGAGTCTTCAAAGATTGGAACTCATTTTTCAAACCCGTCCTCGCTGGTTACCAGTTTAAGCAGCTCAAGAGAACCTAGCCCTGATAAAACGGGTCCCTCACTACTGTTTCCAAAGCCCCCAATGGAAGCAAAGATTGTTAACCCTATTGTTACTGGTGTTAGCTCTTGGTTTCCATCACCGGCAGTGCAAATGAGACCAGCTTCTGCTATTGCTTTGTCTCACTTGCCAGTTTTTGCTGCTTGGAACGACACTTAA 2037 0.4526 MKAMNDSNNDDGNNHNWLGFSLSPQMKMEVTSGPPQHHHHHHYQAQASASATISNTIPTTFYLSSSHLGNSGICYGVGENSNFHSPLTVMPLKSDGSLCIMEALGRSQTQVMVPTSSPKLEDFLGGATMGTHEYGGHERGETMALSLDSIYYNTQNAEAQPNRDHSLDLLSEPFRQQGHMNVQSHPYYSSGLACHGIYQTPIEEETKETQVAVCSTQMPQMTEEGLKNWVAPREYSAQLALEQQMNCGTGNDRVSLGTVGCGELQSLSLSMSPGSQSSCVTAPSGTDSVAMDAKKRGHAKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQAELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGVSAVTNFDISRYDVERIMASNTLLAGELARRNKDSDLRTEAIDYNIGVTSQNNVDAVQARNNNEKDSQWKMALFNHHSQQQSNGCDQKTINCGNYRNSALSVALQDLIGIDSAGSGQPMLDESSKIGTHFSNPSSLVTSLSSSREPSPDKTGPSLLFPKPPMEAKIVNPIVTGVSSWFPSPAVQMRPASAIALSHLPVFAAWNDT* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1437 678 MobiDBLite consensus disorder prediction 592 631 - -
Apr5g1437 678 Pfam AP2 domain 424 473 IPR001471 GO:0003700|GO:0006355
Apr5g1437 678 Pfam AP2 domain 321 379 IPR001471 GO:0003700|GO:0006355
Apr5g1437 678 ProSiteProfiles AP2/ERF domain profile. 321 387 IPR001471 GO:0003700|GO:0006355
Apr5g1437 678 PRINTS Ethylene responsive element binding protein signature 322 333 IPR001471 GO:0003700|GO:0006355
Apr5g1437 678 PRINTS Ethylene responsive element binding protein signature 463 483 IPR001471 GO:0003700|GO:0006355
Apr5g1437 678 CDD AP2 320 387 IPR001471 GO:0003700|GO:0006355
Apr5g1437 678 MobiDBLite consensus disorder prediction 592 622 - -
Apr5g1437 678 ProSiteProfiles AP2/ERF domain profile. 423 481 IPR001471 GO:0003700|GO:0006355
Apr5g1437 678 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13 676 - -
Apr5g1437 678 SUPERFAMILY DNA-binding domain 422 483 IPR016177 GO:0003677
Apr5g1437 678 Gene3D AP2/ERF domain 423 483 IPR036955 GO:0003700|GO:0006355
Apr5g1437 678 Gene3D AP2/ERF domain 320 389 IPR036955 GO:0003700|GO:0006355
Apr5g1437 678 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 13 676 - -
Apr5g1437 678 SMART rav1_2 423 487 IPR001471 GO:0003700|GO:0006355
Apr5g1437 678 SMART rav1_2 321 393 IPR001471 GO:0003700|GO:0006355
Apr5g1437 678 MobiDBLite consensus disorder prediction 27 49 - -
Apr5g1437 678 CDD AP2 422 483 IPR001471 GO:0003700|GO:0006355
Apr5g1437 678 SUPERFAMILY DNA-binding domain 320 389 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1437 Apr-Chr5 18449681 18453265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1437 1 508 AP2-EREBP Transcription Factor Family AT4G37750 53.114 1.50e-159 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Apr5g1437 AP2 1.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1437 K09285 - gmx:100787223 1043.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1437 5 18449681 18453265 Apr5g1437 5 18449681 18453265 ECH
Apr9g0340 9 4551741 4555308 Apr5g1437 5 18449681 18453265 PCT