Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1433 ATGAAGGATGACGCGGACAAAGATAAAGGCGAAGACGCGAAGCTTTGGGGAGTTTTCCTCTTCAGTTTGATTGGCGCCGCTGCCACTACCTTAGCGGTCGGTCAGCTGCGGAGGACCGTTGATTGGTTCTGTGTTCAGCTATCGAAGACGCAGTCGTCATGGAAAAGGGGGAGTGATGGTTCTTTCCGAACGGCATTTCAGGAAGAGGCGTGGAGGAGGCACAATAAGCGATTGCAAGAGGAGTACGAGGAGGAGATGGAGAGAGTGGAACGAATAAGGCGTATGCAAAGTGTGTTTAACAGAGAGAGGAATAAGTACAAAAGAAGCTATGAAAGCTGGAGGGAAAATGGCCCTGGTGCATATCATCAGCATTTCCAGAGAGAGGACTGGTATTGGAAGGCTGATACATCCTTCAGAGACAGGAGGACTAATTATCGAGAAACTCCAAGAGAGAGTGGACACTACGCTTTATCACATCACTACTCAGTTTTGGGTCTTGACAGGTTTAGAAAAGCACAATATTCGGATGCTGAGATTAAGACAGCATTTAGGACCAAGGCAAAGGAGTATCATCCTGATCAGAACCAAGATAATATAGAGGCTGCGGAGGCAAAATTTAAAGAAGTGTTGACTTCTTATGAGGCCATAAAACAGGAAAGGAGGAACCATAATCTATAA 678 0.4602 MKDDADKDKGEDAKLWGVFLFSLIGAAATTLAVGQLRRTVDWFCVQLSKTQSSWKRGSDGSFRTAFQEEAWRRHNKRLQEEYEEEMERVERIRRMQSVFNRERNKYKRSYESWRENGPGAYHQHFQREDWYWKADTSFRDRRTNYRETPRESGHYALSHHYSVLGLDRFRKAQYSDAEIKTAFRTKAKEYHPDQNQDNIEAAEAKFKEVLTSYEAIKQERRNHNL* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1433 225 Gene3D DnaJ domain 153 224 IPR036869 -
Apr5g1433 225 CDD DnaJ 160 214 IPR001623 -
Apr5g1433 225 Coils Coil 68 95 - -
Apr5g1433 225 ProSiteProfiles dnaJ domain profile. 159 221 IPR001623 -
Apr5g1433 225 Coils Coil 199 219 - -
Apr5g1433 225 Pfam DnaJ domain 160 221 IPR001623 -
Apr5g1433 225 SMART dnaj_3 158 221 IPR001623 -
Apr5g1433 225 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 223 - -
Apr5g1433 225 SUPERFAMILY Chaperone J-domain 158 221 IPR036869 -
Apr5g1433 225 PRINTS DnaJ domain signature 183 198 IPR001623 -
Apr5g1433 225 PRINTS DnaJ domain signature 201 221 IPR001623 -
Apr5g1433 225 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1433 Apr-Chr5 18404081 18408505 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1433 - - gmx:100812371 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1433 5 18404081 18408505 Apr5g1433 5 18404081 18408505 ECH
Apr9g0336 9 4495996 4503730 Apr5g1433 5 18404081 18408505 PCT