Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1430 ATGAACATTGCTGCTCTTTTAACATCTGCTGGAATTAATATTACCGTGTGTGTGGTGCTCTTCTCACTCTATTCAATATTACGGAAACAGCCCAGCAATATCAATGTGTACTTTGGAAGAAGGCTTGCCTCTCGGCGTTTGAGAAGCCGTGATCTTTCCTTGGAAAGATTTGTTCCCTCTCCTACCTGGGTAGTGAAAGCATGGGAAACTACTCAAGATGAAATACTGACTATTGGTGGCTTGGATGCTGTGGTTTTTAGCAGGATGCTTGTGTTCAGTATTCGAGTATTTTCTGTCGCTGCTGTCGTCTGCTTTATTCTAGTGCTTCCAGTGAATTACTATGGTCAGGACAGAATACATAAGAATATACCTTTTGAGGCATTGGAAGTATTTACCATTGAGAATGTTGGAGAAGGATCCAGTTGGCTTTGGGCTCATTGTCTCGCGTTATACATCATAACTTTATCAGCTTGTTCTCTTCTTTACTTCGAATTCAAGTGTATTGCTAATTTGCGGTTACTACACATTACTACATCGCCGCCAAATCCAAGTCATTTTGCAATTCTTGTCCGAGGAATACCCTGGTCTCCAGAACAATCATACTGCGATACAGTGAAAAAGTTTTTCTCATATTACCATGCATCAACATATTTGTCACACCAAATAGTGTATAAGTCTGGTGCAGTTCAGAAACTGAAGGATGATGCAGAAGATATGTGTAAGATGGTCGGTGTTGGTTGTCTTTCATTGGGACAGACGTGTAGTCCAAACTTTACGGAATGTTACTTTTGTGGAGGACCTGCAAATTCTTTTAAGATGATTTCTAATGAAATTGATAGTATACATGGGAGAACAGCCTACAGTGACTTGCATTCAAATTCAAGAAAAAAGGAATGTGCGGCAGCCTTCGTGTTCTTTAAAACTCGGCATGCTGCTCTTACGGCTGCCCAAAATCTTCAAACATCAAATCCTATGTTATGGGTCACAGACCTAGCTCCTGAACCCCGTGATGTTTACTGGACAAACCTTTGCATACCATACCAGCAACTTTGGATCCGGAAGATAGCTACATTTGTGGCTTCGATCACCTTCGTGCTTGTATTCCTTATCCCTGTCACATTCGCACAAGGCTTGACTCAACTAGACAAGCTTGAGAAAATGTTTCCTTTTCTTACAGGGATGCTTCAAAAGAAATTTGTGATTCAGCTGGTGACTGGTTACTTGCCAAGTGTGATTTTGGTTTTATTTTTATATGCTGTTCCACCAGTGATGATGCAATTTTCAGCAGTGGAGGGACCTATTTCCCGTAGTGGAAGAAAGAAGAGTGCATGCACCAAAGTTTTGTACTTCACAATTTGGAATGTGTTTTTTGTTAATGTTTTTGCCGGGTCTATCATCAGCCAACTCTCAGTCTTTACTAGTATAACAGAACTACCTGCCCAACTTGCCAAGGCAGTCCCACTGCAGGCTACCTACTTTACAACATATGTTCTATCATCTGGTTGGGCAAGTTTGGCATTTGAAATCATGCAACTGTTTCCTCTTTTCTGCAATCTGTTCCAGAGATTCGTACTCGGGTATAAGGACGATTCAATGGATGGCAACCTAACTTTTCCATACCATACAGAAGTTCCAAGGATATTACTATTTGGATTCCTTGGGTTCACCTGTTCTATTCTGGCACCCCTGATATTGCCCTTCTTATTGTTTTACTTTATACTTGCATACCTCGTCTACCGAAACCAGATTCTCAATGTATATATCAAAAAATATGATGGCGGGGGACAGCTATGGCCCATTGCTCACAACACAACAGTTTTCTCATTGCTCTTCTCTCAAGTTATTGCACTTGGGGTGTTTGGACTAAAACGCTCAACAGTTGCATCTGGATTTACCATTCCATTGCTGATTGGTACCATTCTATTTCATCAATATTGTAGGCAGCGATTTCTCCCAGTATTTAAGAACAATGCAGCACAGGTTCTCATTGACATGGATCGTAGAGATGAGCATTGTGGGAGAATGAACGAGGTTTATGAACAAATGCATTCAGCTTACAGCCAGTCCACTGGTTCTACTCAATCTGAATGTTTCAGTAGTCGTCCAGGGAACAGGGAATGTGTTCAGACCCCACAAGATATGGAGAGAGGCATGGATTAA 2160 0.4125 MNIAALLTSAGINITVCVVLFSLYSILRKQPSNINVYFGRRLASRRLRSRDLSLERFVPSPTWVVKAWETTQDEILTIGGLDAVVFSRMLVFSIRVFSVAAVVCFILVLPVNYYGQDRIHKNIPFEALEVFTIENVGEGSSWLWAHCLALYIITLSACSLLYFEFKCIANLRLLHITTSPPNPSHFAILVRGIPWSPEQSYCDTVKKFFSYYHASTYLSHQIVYKSGAVQKLKDDAEDMCKMVGVGCLSLGQTCSPNFTECYFCGGPANSFKMISNEIDSIHGRTAYSDLHSNSRKKECAAAFVFFKTRHAALTAAQNLQTSNPMLWVTDLAPEPRDVYWTNLCIPYQQLWIRKIATFVASITFVLVFLIPVTFAQGLTQLDKLEKMFPFLTGMLQKKFVIQLVTGYLPSVILVLFLYAVPPVMMQFSAVEGPISRSGRKKSACTKVLYFTIWNVFFVNVFAGSIISQLSVFTSITELPAQLAKAVPLQATYFTTYVLSSGWASLAFEIMQLFPLFCNLFQRFVLGYKDDSMDGNLTFPYHTEVPRILLFGFLGFTCSILAPLILPFLLFYFILAYLVYRNQILNVYIKKYDGGGQLWPIAHNTTVFSLLFSQVIALGVFGLKRSTVASGFTIPLLIGTILFHQYCRQRFLPVFKNNAAQVLIDMDRRDEHCGRMNEVYEQMHSAYSQSTGSTQSECFSSRPGNRECVQTPQDMERGMD* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1430 719 Pfam Cytosolic domain of 10TM putative phosphate transporter 186 342 IPR027815 -
Apr5g1430 719 Pfam Late exocytosis, associated with Golgi transport 6 164 IPR032880 -
Apr5g1430 719 PANTHER ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN 2 700 - -
Apr5g1430 719 Pfam Calcium-dependent channel, 7TM region, putative phosphate 353 620 IPR003864 GO:0016020
Apr5g1430 719 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 2 700 IPR045122 GO:0005227
Apr5g1430 719 MobiDBLite consensus disorder prediction 693 719 - -
Apr5g1430 719 MobiDBLite consensus disorder prediction 693 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1430 Apr-Chr5 18371853 18380619 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1430 K21989 - gmx:100789875 1196.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1430 5 18371853 18380619 Apr5g1430 5 18371853 18380619 ECH
Apr9g0333 9 4470307 4481383 Apr5g1430 5 18371853 18380619 PCT