Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2941 ATGAAGAGAGGGAAGGATGATGAGAAGGTTATGGGGCCAATGTTCCCGAGATTGCATGTGAATGATACAGAGAAGGGAGGGCCAAAAGCACCACCAAGGAATAAGATGGCYCTTTATGAACAATTCAGTATTCCCTCTCAAAGGTTCAACTCTGGTGTTCTTCCACTCAATCCAAATACTTCTACTACTAACACACCTCCACCTCCAGCATCCTCAACCCAGGGGACTGGTCCTGAGAGAAACTATGCGTTCCCTTATCAATTCCCCCCACAAACTCCTACTCGCCGAGCTGAAAAATATAGTGTTTCTCGCCAATCTGAGGTGGCAAATGGGAATGGTTCATTGCTACAACTCGAACAGAGAAAGAAGGTGGATGAAGATGACTTTAGAGTTCCTGTATATGTTCATTCAAGAATTGGTCTATCTAACAATAAAAGGCGTGAAAGCTTGGATGGGGAAAAGCTCGTTCCATCGAGCTCTAGGTATTTTGGTTCCTCAGTAGCAGGGCAAAATGATTGTGTAAGGAATCCAAAACAACTTGGCTCCTCACTCGTCAATACGAGAAAAGATCGGAGAAGTGAGACCGAAGGTCTTCCACAAGTGAGCACGAATAAGGAGCAATCGGTAGTATTTGTCAGAAAGATATCATTGACAGGAGAGAATATTGACATTTTGGCCAGGCAATCCAAGGTGAATCCAAGTCAAGAGTTTCAAGATAGTCCTCTGTCAAAACATAGCAGATTACGACAGGATGGTGCTTGCACACAGCGCGAAGGCAGAGCTGGGTCACAATCCAATGGCATTGGACACGTTGATGGCGTTGCTGAGTCTACGAGGGAGACAGACAAAGGAAATGTCCCTACAACAAACCAAACCAGTCCAGCAGAGGCTATCAATGACACTGAATGTCGTGATACCAGGACTGGTGGTGCGACACAGAAGAGAAACTTAAACAAAAGTGACAATATTTCCAAGATTTCTGTGGTAGAGAATTTGTCAACTTCAGATTTATCTCCTGATGATGTTGTTGGGATTATAGGTCAGAAACATTTCTGGAAAGCTAGAAGAGCAATTGCCAACCAACAAAGGGTGTTTGCAGTCCAAGTTTTTGAGTTGCACAGATTGATAAAGGTCCAAAAGTTGATTGCAGGATCACCAGATATTTTGATTGAAGATGCTGCTTTTCTTGGAAAGTCTCCCCCAAAGGGCTCTACGCCTAAAAAACTGGCGATCGAATATGTTGTAAAACCTAGGCAACCGAATCTTAAGCGCAAGGATGAATCTGAGAAGCTACATCATAAAATGGAATGTTCAGCTGAGAATGCGGTTGGGAAAACATCTCTTTCATCTGTGAAAAATGGTAGTCACCCTTCAAATTACACCCCTTTTGCTGGGAACCCATACCAGACAAATTCGGCTGCTGATAGCGGAATGGGTCCGTGGGGTTTCCATCAGTCTCCCGGGCACCAGTGGTTAATTCCAGTTATGTCTCCGTCTGAAGGGCTGGTCTATAAGCCTTATCCCGGGCCTGGATTTACCGGAACTATGTGCGGAGGATGTGGGCCGTTTGCGCCTGCTCCTATGGGTGGTACCTTCATGAATCCTGCATATGGAGTACCAACTTCTAATCAAGTACCTGGGGTTCCACCAGAGACACCCCCAGGCAGTCATGCTTTCTTCCCTCCATACGGCTTGCCAGTTATGACTAAAGCCATGTCGGAGTCAGCTGTTGAACAGGCGAACCAGTTCTCTGCTCGAGGCTCTCAAGGGCAAAATGACCATTCACAGGGTGGGGACGCCAATCCAAGCACAAATAATCAAAACTCAAATAATCTGCCAGATCCGAGAAATGGAACAATATCAAATGTGATGAGATACCAGGTATGCTCTAGGGAGGTTGAATTGCAAGGGAGTTCTGCAACTAGTCCTAGTGAAACGGCGCAAGGGCGAACCGATGCAGGAAGAGATGTGCTTCCTCTTTTCCCAATGGGTCCAGTAACACCAGAGGGTGCCCCTCAGTCTCTTGAAACCGGGCAGCAAACAAGAGTGATCAAAGTTGTACCTCACAATAGAAGAACAGCAACTGAATCAGCAGCTAGAATTTTCCGGTCGATTCAAGAAGAAAGAAAACAGTATGAATCAATGTGA 2148 0.4558 MKRGKDDEKVMGPMFPRLHVNDTEKGGPKAPPRNKMALYEQFSIPSQRFNSGVLPLNPNTSTTNTPPPPASSTQGTGPERNYAFPYQFPPQTPTRRAEKYSVSRQSEVANGNGSLLQLEQRKKVDEDDFRVPVYVHSRIGLSNNKRRESLDGEKLVPSSSRYFGSSVAGQNDCVRNPKQLGSSLVNTRKDRRSETEGLPQVSTNKEQSVVFVRKISLTGENIDILARQSKVNPSQEFQDSPLSKHSRLRQDGACTQREGRAGSQSNGIGHVDGVAESTRETDKGNVPTTNQTSPAEAINDTECRDTRTGGATQKRNLNKSDNISKISVVENLSTSDLSPDDVVGIIGQKHFWKARRAIANQQRVFAVQVFELHRLIKVQKLIAGSPDILIEDAAFLGKSPPKGSTPKKLAIEYVVKPRQPNLKRKDESEKLHHKMECSAENAVGKTSLSSVKNGSHPSNYTPFAGNPYQTNSAADSGMGPWGFHQSPGHQWLIPVMSPSEGLVYKPYPGPGFTGTMCGGCGPFAPAPMGGTFMNPAYGVPTSNQVPGVPPETPPGSHAFFPPYGLPVMTKAMSESAVEQANQFSARGSQGQNDHSQGGDANPSTNNQNSNNLPDPRNGTISNVMRYQVCSREVELQGSSATSPSETAQGRTDAGRDVLPLFPMGPVTPEGAPQSLETGQQTRVIKVVPHNRRTATESAARIFRSIQEERKQYESM* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2941 715 MobiDBLite consensus disorder prediction 573 620 - -
Amo17g2941 715 PANTHER PROTEIN EARLY FLOWERING 3 1 713 IPR039319 GO:2000028
Amo17g2941 715 MobiDBLite consensus disorder prediction 634 654 - -
Amo17g2941 715 MobiDBLite consensus disorder prediction 168 184 - -
Amo17g2941 715 MobiDBLite consensus disorder prediction 168 204 - -
Amo17g2941 715 MobiDBLite consensus disorder prediction 94 114 - -
Amo17g2941 715 MobiDBLite consensus disorder prediction 48 114 - -
Amo17g2941 715 MobiDBLite consensus disorder prediction 634 649 - -
Amo17g2941 715 MobiDBLite consensus disorder prediction 281 299 - -
Amo17g2941 715 MobiDBLite consensus disorder prediction 48 80 - -
Amo17g2941 715 MobiDBLite consensus disorder prediction 574 620 - -
Amo17g2941 715 MobiDBLite consensus disorder prediction 230 299 - -
Amo17g2941 715 PANTHER FLOWERING PROTEIN, PUTATIVE-RELATED 1 713 - -
Amo17g2941 715 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2941 Amo-Chr17 131628644 131633065 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2941 K12125 - gmx:100793561 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2941 17 131628644 131633065 Amo17g2941 17 131628644 131633065 ECH
Amo16g4095 16 153421860 153427067 Amo17g2941 17 131628644 131633065 ECH