Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2888 ATGAGAAACAAAGGTGCGCAGAACAAGTTGGTGAGGATCATAACCACACCTATAAGAGTTCTTGGAAAGGCGAAGGACATGTACGTTCGAAGCATAACACAGTGCGGTTACAGCGTCAGCTACGGCAACACCGGAGACGCGGCGGGGAGATTCCAGGCGGGGCTGCCGCGAAGCTACAGCGCCGCCACGTCAATGTCCGGTGCAGGTTCGGAGGATTACGCGGAGCTTGTGAGGGCAGCGTCGGCGAGGACCATGGGGAACCGAATCGACGTGGATTTGGTCCTGAAACTGCAACAAGAAGCTCGAGGTCGAGGTCAAAGTCAAAGTCAAAGTCAACCAGTGGGGTTGCCAAAGTCGGTGAGTGTTGGTATGGGTCGAATTGATGAGGATAAACCTTTTGATTTGAATGAAGGGGGTGAAGCTGTTGTGCCTAATTCTTACCCTAGAAGTAGAAGCTATGCTGTTGGAATTAGAAAACCCAGCCTTGTTCAAGGAATAATAATGGCTAATTAG 513 0.5088 MRNKGAQNKLVRIITTPIRVLGKAKDMYVRSITQCGYSVSYGNTGDAAGRFQAGLPRSYSAATSMSGAGSEDYAELVRAASARTMGNRIDVDLVLKLQQEARGRGQSQSQSQPVGLPKSVSVGMGRIDEDKPFDLNEGGEAVVPNSYPRSRSYAVGIRKPSLVQGIIMAN* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2888 170 PIRSF UCP031279 1 165 IPR016972 -
Amo17g2888 170 PANTHER OS07G0123800 PROTEIN 3 158 - -
Amo17g2888 170 MobiDBLite consensus disorder prediction 100 123 - -
Amo17g2888 170 MobiDBLite consensus disorder prediction 101 117 - -
Amo17g2888 170 PANTHER - 3 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2888 Amo-Chr17 131008625 131009249 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2888 - - gmx:100785988 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2888 17 131008625 131009249 Amo17g2888 17 131008625 131009249 ECH
Amo16g4150 16 154175032 154176154 Amo17g2888 17 131008625 131009249 PCT
Amo17g2888 17 131008625 131009249 Amo16g4150 16 154175032 154176154 PCT