Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4160 ATGGCTTCGTCTCTGTCGTTTTCAGATTTCCCCGAAGACGTTCAGCTCTGCATACTGTCGTTTCTCTCTCCCACCGAAATCGCCACGTTCTCCTGCACATCAAAACGCTTCGTTTCGCTCTGCACCAGCGATTCGCGCCTCTGGTTCACGATGTGCGAGAGAAGGTGGGGTTCCAAGACACAGATCAATAAATGGGTGAAGGGTGCAGTCACGTACAGGCACCTCTATAGAACTCTAAGCGAGTGGGAGAATCTCATTGGCTTCTGGCGCCGGAGCGGGCCAGGTAGCGCTTCAATTTCTTCGCCTTCGTTGCTCTTCTTTGAGTGGTGGGATACTTGCATTTCGGGATTTAGGGTTTCGCCGTCGACCAATGGGTCATATGGCGTTGTTAAAGCTCCGTTTCTTTGGATGGGTCTTTCGGATGATGGCCAGATCGTTAATTTGTTGGATCCTGATGGCCGCAGTGAGGTTTCCGCGCCGGAGTTCGCGGCGGTGCCGGCGAATGGGGAGGTTGGATTAACTGAGAATGAGTTGATTCCAGTGAATTTGAGTTTCATGGGGAGGACGCATTTTGTTGTGGAGGAAAATCAGAGCTTTGCTGCTGCAAATTCTTCGAGTTGCAGTTCTGATCAGAAGAGAAATGGGTTTAGTAGGAGTATGAGCCCTGGGAACCTAAGCGGCGATGAATACGGTAGTGTCGGAGAGGATGTCAGTGGATCGCCAGGAAGCTTGCCAGACCGGTTGATGTCTGAGATTTATCAGCATTTGGCAAATAGGACTAGCCCTGGAAGTGATAAGTCGAGGAAGCAGAGGAGAAGGGAGAAGGAGAGGCTGGCTAAGAGGAAATGGGAGCCTGAGCATTTTGTGAAGATCGAGAATTGCTCACCAACACCATCGCGGCCTTTACAAGGCCTTTGGAAGGGAATCTGTGATGACATGAATTTAGCCTTTTACCTTGTGGTGTATGATGACATCGGGGGCATTGCCTGCCGAAGAGTTGGGGATCCTCCTGAGCGCTTTTCCAACTATGCCCCGGTTTTCTGGACATCTAAAACGACATTTCTGGAGACTCCATTTTCTCTGGAGGAAGAAACCTTGTATGACAGCCGGCTTCATATCAGACCGCATCAAACAAGCTTTGAAATTCAAGAGCAGTTCCACTTGTCCGATGTCGAAGTGGTAAACCCATTTCAGCAGTTACATTTGTCAGGCAACGAAGTTGTCAAACGAATTCTTCACATAAGCTCAAGCTATGATTTAGTTATTCCAGATGCAGCTGGAATGATAAATCCAAGGAGTGGAGAGGGAAGGATTTGGCAATACCACAATGATACTTTTGGATTTGGATTCCTTTGTGACAACTTTGTCATAGACATGAAGCATATTTTCCGCAACGGTTGTATTGTGGATATAGTGAATCCTTGA 1425 0.4814 MASSLSFSDFPEDVQLCILSFLSPTEIATFSCTSKRFVSLCTSDSRLWFTMCERRWGSKTQINKWVKGAVTYRHLYRTLSEWENLIGFWRRSGPGSASISSPSLLFFEWWDTCISGFRVSPSTNGSYGVVKAPFLWMGLSDDGQIVNLLDPDGRSEVSAPEFAAVPANGEVGLTENELIPVNLSFMGRTHFVVEENQSFAAANSSSCSSDQKRNGFSRSMSPGNLSGDEYGSVGEDVSGSPGSLPDRLMSEIYQHLANRTSPGSDKSRKQRRREKERLAKRKWEPEHFVKIENCSPTPSRPLQGLWKGICDDMNLAFYLVVYDDIGGIACRRVGDPPERFSNYAPVFWTSKTTFLETPFSLEEETLYDSRLHIRPHQTSFEIQEQFHLSDVEVVNPFQQLHLSGNEVVKRILHISSSYDLVIPDAAGMINPRSGEGRIWQYHNDTFGFGFLCDNFVIDMKHIFRNGCIVDIVNP* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4160 474 MobiDBLite consensus disorder prediction 256 279 - -
Amo16g4160 474 MobiDBLite consensus disorder prediction 202 226 - -
Amo16g4160 474 ProSiteProfiles F-box domain profile. 4 51 IPR001810 GO:0005515
Amo16g4160 474 SMART fbox_2 10 51 IPR001810 GO:0005515
Amo16g4160 474 MobiDBLite consensus disorder prediction 202 244 - -
Amo16g4160 474 Gene3D - 2 85 - -
Amo16g4160 474 SUPERFAMILY F-box domain 4 81 IPR036047 GO:0005515
Amo16g4160 474 Pfam F-box domain 7 46 IPR001810 GO:0005515
Amo16g4160 474 MobiDBLite consensus disorder prediction 262 279 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4160 - - cam:101511334 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g4160 16 154274428 154277461 Amo16g4160 16 154274428 154277461 ECH