Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4158 ATGGCACCATTAACACCAAAATCCAATGATAATGAGGACCCTGAGGAAAACCAAGCTCTTAATAAGCTTGAATCAGCATGTTCTGATTTAGAATCTTTCCTCAGAGCAACAGAGATCATGGAACACAACCTTGTAACCATGGAAACAAGGTTCGATCTCTTACAAGGATCTTTATCCAATGCATCCAGAAGGATCACACCTTTGCAATCCTTGGCCATGTCAAGGAAAGCACTTGAAACAAGGATCAACCGAGCCGTTTCGCCGGCGCTGGAGCTCATCGAGACCTTTAAGGTCGCCGAGTCCCTCCAGCACCGGATTCTTGACCTCTCGGCCAATCTCTTGGCCGAGAGGACACAGCAGAAGAGGCTCCAGAAGCTTCTAGAATACGCCGATTGCGTTGATAGGTTAAACGAGGCGATTAACTCTATATGTCAAGTTGGTGAGGGTGTCATTTTGAAGCTTCAAGAGGTTGTGGAGTTCATAAGCAGAACAAAGGCTGCGGATCAATACAGGACACAAAGGTTGAGAGAGGCACTAGCCACACTGAAGGCACTGTATGAAACTGAGGTGGATGAGATGAGATTTGAAGGGTTACTAGACCAAGCTTTGCTTCATATGCAAGATGAATTTGAGGCAATATTCTTGAGCATAAAGCATAAGAACCTAGGAGATATGTCACAACTACAATATGATGATGATGATGAAAATAATAATGATACTAACAATGAACTTGTCAATAACAACTTTGTTGCTTGTGAATTGGGGTCAGAGCTTGAAGTTGAAGTCCTCAGAAGAATTTCATTCACTCTTGCTGCTAATGATTGCTTGGATATTTGCATTGATATCTACGTCAAGGTGAGGTATAGAAGGGCTGCAAAAGCATTAATGAAGCTAAACCCAGATTACTTAAAAACATACACACCAGAAGGAATTGATGAAATGGAATGGGAAACCTTAGAATCAGCCATAACCCTTTGGACCCAACACTTCCAAGTTGCTGTTAGAAAAGTTCTCAAGTCAGAGAAATCACTCTGCCAAAGAGTCCTAGGCACAATCATGGATGGACTAGTTTGGCCAGAATGCTTTGTTAAAATCTCAGACAAGATCATGGCCGTGTTCTTTCGATTCGGCGAAGGAGTTGCGAGGAGCAGCAAGGAGCCGCAGAAGTTGTTCAAGCTTTTGGACATGTTTGAATCATTGGAGAGGCTAAAAGAACATGTGTTGGAAACTTTTGAAGGTGAATCTGGTGTGGATATTTGTACTAGGTTTAGGGAACTTGAGAAGCTTATTATTGATGCATCAAGCAAAGTTTTTTGGGAATTTGGATTGCAAATTGAAGGCAATGCTGATGGACTTCCTCCACCACAAGATGGTTCTGTTCCAAAACTTGTTAGGTACGCAATTAACTACCTAAAGTACCTTGCCTCGGAGAATTACAGAACATCCATGGCTAAGGTTCTAAGAACAGAGCAAATATGGAAAAATGGGATACTGTCGAAACAAGAAACAGATGAGAGTCTATTGAAGAATGCAATTTCCAATGTCATGGAAGCACTTGAAAGAAACATTGAATCAAAACGTTCAAGATGTAGGGACAAGATCTTAGTGCAAGTTTTCTTGATGAACACGTATTGGTACATATACATGAGGACCAAGAACACAGAACTTGGTGAGCTATTGGGAGATCAATACATGAAGATTGGGTACAAAACAGTGGCGGAAGAATCAGCTTACTTGTACCAGAAGCAATCGTGGGGTGTTCTGGTGGCGATTTTGGATGGCGGCGATGTCCAAGAACATGGGAAGGATAGCATAGGAAGGTTGGTGAATGAGAAGATGGAGAGTTTCTTCAAGTGTTTGAATGAGGTTTGTGAGAGGCACATAAGAGGTGGTTATAGCATTCCGGATTTAGATTTGAGAGAACAAATGAGAGAATCCACTATGAAGCTTGTTGTTCCGGCTTATGTTGAGTTCTTGGAGTCTTACTCTGGATTCTTGCAGAGGAAAATGTATCCCAGCCCCGATAAGTTGCGAGGGATGGTGAGGAAGGCTTTTGACGGCGGCGAGGGGAGGCCGAGGAGGCGCGGTTCGACTTCTAATGATCGGAATGCCGGAGGGAACTCTGCGTCTCTAGAGGGTGATATAAGAGATTTGAGACCATCAAGATCAAACAGTCAAGATGTGTGA 2187 0.4289 MAPLTPKSNDNEDPEENQALNKLESACSDLESFLRATEIMEHNLVTMETRFDLLQGSLSNASRRITPLQSLAMSRKALETRINRAVSPALELIETFKVAESLQHRILDLSANLLAERTQQKRLQKLLEYADCVDRLNEAINSICQVGEGVILKLQEVVEFISRTKAADQYRTQRLREALATLKALYETEVDEMRFEGLLDQALLHMQDEFEAIFLSIKHKNLGDMSQLQYDDDDENNNDTNNELVNNNFVACELGSELEVEVLRRISFTLAANDCLDICIDIYVKVRYRRAAKALMKLNPDYLKTYTPEGIDEMEWETLESAITLWTQHFQVAVRKVLKSEKSLCQRVLGTIMDGLVWPECFVKISDKIMAVFFRFGEGVARSSKEPQKLFKLLDMFESLERLKEHVLETFEGESGVDICTRFRELEKLIIDASSKVFWEFGLQIEGNADGLPPPQDGSVPKLVRYAINYLKYLASENYRTSMAKVLRTEQIWKNGILSKQETDESLLKNAISNVMEALERNIESKRSRCRDKILVQVFLMNTYWYIYMRTKNTELGELLGDQYMKIGYKTVAEESAYLYQKQSWGVLVAILDGGDVQEHGKDSIGRLVNEKMESFFKCLNEVCERHIRGGYSIPDLDLREQMRESTMKLVVPAYVEFLESYSGFLQRKMYPSPDKLRGMVRKAFDGGEGRPRRRGSTSNDRNAGGNSASLEGDIRDLRPSRSNSQDV* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4158 728 PANTHER OS08G0519900 PROTEIN 17 687 - -
Amo16g4158 728 MobiDBLite consensus disorder prediction 683 698 - -
Amo16g4158 728 Pfam Exo70 exocyst complex subunit 326 669 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo16g4158 728 Gene3D Exocyst complex component Exo70 155 695 - -
Amo16g4158 728 PANTHER EXOCYST COMPLEX PROTEIN EXO70 17 687 IPR004140 GO:0000145|GO:0006887
Amo16g4158 728 SUPERFAMILY Cullin repeat-like 173 685 IPR016159 -
Amo16g4158 728 Coils Coil 509 529 - -
Amo16g4158 728 MobiDBLite consensus disorder prediction 683 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g4158 Amo-Chr16 154260786 154264143 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g4158 17 668 EXO70 exocyst subunit family AT4G31540 26.987 1.13e-69 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4158 - - aip:107605596 1394.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g4158 16 154260786 154264143 Amo16g4158 16 154260786 154264143 ECH
Amo16g4158 16 154260786 154264143 Amo06g3063 06 97394115 97397502 hybridization