Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4154 ATGGCTCAAAATAATGGTGGAGAAGATTGCAGCAAAGGTTGCAAGAAATGTTGCAAAAAGATAGTAGAGGTGCAGGTTCAGCCACACCCAGTAAAAGATCAATTACCTGGAGTTCAATATTGCATCAACAGTCCTCCTCCATGGCCTGAAGCATTTTTGTTGGGGTTCCAGCATTACATTTTGACTCTTGGCATGATTGTCCTGATTCCAACCATAATTGTTCCTCAAATGGGTGGAGGAGATGCTGAGAAGGTGAGGGTGATTCAGACCCTTCTCTTTGTTGCAGGGTTAAGCACCATTCTTCAATCTTTGTTTGGAACCAGATTGCCAACAGTTATTGCTGGTTCATACAGTTACATAATACCAGTCATTTCAATAGTTCAAGCTAAAAGATATGATTTATATACAGATCCTTATGAGAGATTCACTCAGACAATGAGAGGGATTCAAGGTGCCTTGATCTTAAGTGCATGTTTCCAGATGGTACTCGGATTTTTCGGCTTTTGGAGGAATGCTGTCAGGTTTCTTAGTCCACTTTCTGTAGTCCCATATGTAACTTTCACTGGACTTACTCTCTATCATCTTGGATTCCCAATGTATCTACATAGATATATTGCAACAAAGAAGCCTATACATGACCGATTCGCAGTGCTGTCCACGGTTGTGATTTCATGGCTATTTGCACAGCTTCTCACTTCATGCACTGCATATAACAACAGGCCAGAAACTACACAGACTAGCTGCCGAACTGATCGAGCCGGACTTGTGAGCGCCGCCTCATGGGTATATTTTCCTTACCCCTTCCAATGGGGAAGTCCTACTTTCAATGCTGGAGAAGCTTTTGCTATGATGGCTGCTTCTTTTGTTTCTCTATTTGAGTCTACCGGAACATTCTATGCTTCGGCAAGATTTGGAAGCGCAACGCCGGTGCCACCATCTATTATCAGCCGTGGAGCTGGCTGGATTGGAGTAGCTACAATGCTGAATAGCATGTTTGGTTCTGTCACTGGAAGCACAGCATCAGTGGAGAATGCTGGTTTGTTAGCATTAACAAGAGTTGGAAGCCGAAGAGTCATTCAAATATCAGCAGGCTTTATGATTTTATTCTCTGTATTTGGGAAATTCGGCGCGCTTTTCGCCTCTATACCTTTGCCAATCTTCGCAGCCTTATACTGCGTGGTCTTCGGCTATGTCTCTTCTTCTGGCCTTGGATTTCTCCAATTCTGTAACCTCAACAGTTTCAGAACCTTGTTTATTTTGGGATTCACATTCTTCATTGGCTTCTCAATTCCACAATATTTCTCAGAGTATTATCATGTGAAGCATGGATCAGCTGGTGCAAGATGGTTCAATGACATTGTGACAGTCATGTTCATGTCACATACAATGGTTGCTGCCTTGGTTGCATTCATTCTGGACATCACACTGTTGCGCGAAAACGACGATGATCGAAAAGACAGTGGAATGCAATGGTGGGAGAGGTTCACCATGTATAACAAAGATGTTAGGAACAATGAATTCTATTCTTTACCATGCAGGCTTGATGAATTATTTCCAGCACTTTGA 1566 0.4266 MAQNNGGEDCSKGCKKCCKKIVEVQVQPHPVKDQLPGVQYCINSPPPWPEAFLLGFQHYILTLGMIVLIPTIIVPQMGGGDAEKVRVIQTLLFVAGLSTILQSLFGTRLPTVIAGSYSYIIPVISIVQAKRYDLYTDPYERFTQTMRGIQGALILSACFQMVLGFFGFWRNAVRFLSPLSVVPYVTFTGLTLYHLGFPMYLHRYIATKKPIHDRFAVLSTVVISWLFAQLLTSCTAYNNRPETTQTSCRTDRAGLVSAASWVYFPYPFQWGSPTFNAGEAFAMMAASFVSLFESTGTFYASARFGSATPVPPSIISRGAGWIGVATMLNSMFGSVTGSTASVENAGLLALTRVGSRRVIQISAGFMILFSVFGKFGALFASIPLPIFAALYCVVFGYVSSSGLGFLQFCNLNSFRTLFILGFTFFIGFSIPQYFSEYYHVKHGSAGARWFNDIVTVMFMSHTMVAALVAFILDITLLRENDDDRKDSGMQWWERFTMYNKDVRNNEFYSLPCRLDELFPAL* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4154 521 Pfam Permease family 51 205 IPR006043 GO:0016020|GO:0022857|GO:0055085
Amo16g4154 521 Pfam Permease family 208 434 IPR006043 GO:0016020|GO:0022857|GO:0055085
Amo16g4154 521 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 10-RELATED 17 520 - -
Amo16g4154 521 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 17 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g4154 Amo-Chr16 154221853 154225691 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g4154 25 520 Organic Solute Cotransporters AT1G65550 59.542 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4154 - - gmx:100801755 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g4154 16 154221853 154225691 Amo16g4154 16 154221853 154225691 ECH