Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4152 ATGGCGGTATTATCGGAGATAAACGACGGCGACGAGGAGAAAGAGCTGGACGAGGAGCCCGGCGAGGTGATCGAATCGGCGCCGCCGCAGAAGGTCGGCGAAGAGAGGGAACTCGGTAACTATGGACTGAAGAAGAAGCTCATCAAGCGCGGAATCGGTTGGGAAACTCCTGAGCTCAACGATGAAGTCACTGTGCACTATGTTGGGACTTTGGAAGATGGAACCAAGTTTGATTCCAGTAGGGATAAAGATCAACCTATAAAGTTCACTCTTGGTCAAGGTGAACTGGCTGCTGGATTGGATCATGGAATAATCACCATGAAGAAGGGGGAGGTAGCTTTGTTCACAATACCTGATGAGMCGGGTGTTTCATCGGCCAACTCCAAGCAGTTTGAGGTGGAGCTCATTTCGTGGATCAAAGTGGTGGATGTTTGCAGAGATGGTGGGATTATCAAGAAAATTATGGAGAAGGGGGTTGGGGATGAGCGACCCCGTGATCCAGATGAAGTCCTTGTGAAGTATCGGATGGCACTAGCTGATGATACTATTGTTGCTGAAACACCAGAAGGAGGAGTTGAATTTCATGTTAAGGATGGTCATCTTCTTCCGGGATTGCCAAGAGTAATCATGACTATGACAAAGGGAGAGAAGGCTCAATTAATTGTTCAACCCCACTATGCTTTTGGAGAGAAGGGGAGTGAAGCTAGCAATGGAGTACATTCTGTTCCACCAAATTCAGTGCTGCATGTTAATATTGAATTGGTTTCTTTCAAGCCTGTCATAGATGTTACTGGTGACTCCAAGGTGCTTAAGAAAATTTTGAAAGAAGGAGAGGGTGCTTCCACAGCAAATGAGGGTGCAAATGTTACAGTCAGTTACACAGCAAAGCTAGAAGATGGAACTGTATTTGAGAAAAGAGGAATCGATGAAACTCCTCCTTTGGAATTTATAACTGATGAAGAACAAGTGATTGTTGGTCTAGATCGAGCAGTGGTAACTATGAAGAAGGGTGAGAGAGCCATAATTAGCATACATCCTGATTATGCATTTGGAGATGTTGAAGTAAAACGGGACTTCGCCATGGTTCCACCAAGCTCACGTGTAGTCTATGATGTTGAAATGAAAAATTTCATTAAGGAGAAAGCACCATGGGAATTGAAAAGTAACGAGAAAATTGATACAGCTAAAAGGAAGAAAGAAGAAGGCAATATGCTATTTAAATGTTGCAAGTATGAGCGGGCAGCCAAGAAGTATGATAAGGCTGCTGATTATGTTAGTGAAGATGGATCGTTTGGGGATGATGAGGAAAAACAAGCTAAAGCATTAAGAGTGTCATGCTGGTTGAATGGTGCAGCTTGTTGCCTTAAACTTAACGACTTTCCTGGAGCAATCAAGTTATGTTCACAGGTGCTTGATGTTGAGATTTGCAACGTAAAAGCTTTATACAGACGAGCGCAGGCATATATAGAGACTGGAGATTTTCTGTTGGCAGATGTAGACATCAAGAAAGCTCTTGAGGTGGACCCACAAAATAGGGAGGTAATGGTAATGAAGAAGAAATTAAAGCAACTTCAGGCTGAGAATGATAAGAAATATGCTAAGCTCTATGAAAATATGTTTGCGCATAAAGAAAAGGARTCATCTGTGGCAACAAAGAGATTGAAGGTTGAAAAAGAAGAGGACGAGAAGAAAAATGAAGAGGCCACGAAGATGGAAATGGACAAAGTTGCGGATAGTGCTGCTCCTTCTGTCGACGGTCTAATTGTGGATTCATAA 1776 0.4302 MAVLSEINDGDEEKELDEEPGEVIESAPPQKVGEERELGNYGLKKKLIKRGIGWETPELNDEVTVHYVGTLEDGTKFDSSRDKDQPIKFTLGQGELAAGLDHGIITMKKGEVALFTIPDEXGVSSANSKQFEVELISWIKVVDVCRDGGIIKKIMEKGVGDERPRDPDEVLVKYRMALADDTIVAETPEGGVEFHVKDGHLLPGLPRVIMTMTKGEKAQLIVQPHYAFGEKGSEASNGVHSVPPNSVLHVNIELVSFKPVIDVTGDSKVLKKILKEGEGASTANEGANVTVSYTAKLEDGTVFEKRGIDETPPLEFITDEEQVIVGLDRAVVTMKKGERAIISIHPDYAFGDVEVKRDFAMVPPSSRVVYDVEMKNFIKEKAPWELKSNEKIDTAKRKKEEGNMLFKCCKYERAAKKYDKAADYVSEDGSFGDDEEKQAKALRVSCWLNGAACCLKLNDFPGAIKLCSQVLDVEICNVKALYRRAQAYIETGDFLLADVDIKKALEVDPQNREVMVMKKKLKQLQAENDKKYAKLYENMFAHKEKESSVATKRLKVEKEEDEKKNEEATKMEMDKVADSAAPSVDGLIVDS* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4152 591 SUPERFAMILY TPR-like 390 542 IPR011990 GO:0005515
Amo16g4152 591 SUPERFAMILY FKBP-like 39 152 - -
Amo16g4152 591 SUPERFAMILY FKBP-like 146 259 - -
Amo16g4152 591 Gene3D - 36 141 IPR046357 GO:0003755
Amo16g4152 591 Gene3D - 142 257 IPR046357 GO:0003755
Amo16g4152 591 PANTHER PEPTIDYLPROLYL ISOMERASE 260 374 - -
Amo16g4152 591 PANTHER PEPTIDYLPROLYL ISOMERASE 7 262 - -
Amo16g4152 591 MobiDBLite consensus disorder prediction 551 574 - -
Amo16g4152 591 MobiDBLite consensus disorder prediction 551 591 - -
Amo16g4152 591 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 375 563 - -
Amo16g4152 591 Gene3D Tetratricopeptide repeat domain 383 538 IPR011990 GO:0005515
Amo16g4152 591 Gene3D - 258 382 IPR046357 GO:0003755
Amo16g4152 591 Coils Coil 549 576 - -
Amo16g4152 591 PANTHER PEPTIDYLPROLYL ISOMERASE 375 563 - -
Amo16g4152 591 Coils Coil 514 534 - -
Amo16g4152 591 MobiDBLite consensus disorder prediction 1 36 - -
Amo16g4152 591 ProSiteProfiles TPR repeat profile. 478 511 IPR019734 GO:0005515
Amo16g4152 591 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 60 258 IPR001179 GO:0003755
Amo16g4152 591 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 286 378 IPR001179 GO:0003755
Amo16g4152 591 SMART tpr_5 395 428 IPR019734 GO:0005515
Amo16g4152 591 SMART tpr_5 444 477 IPR019734 GO:0005515
Amo16g4152 591 SMART tpr_5 478 511 IPR019734 GO:0005515
Amo16g4152 591 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 161 255 IPR001179 GO:0003755
Amo16g4152 591 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 280 374 IPR001179 GO:0003755
Amo16g4152 591 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 55 130 IPR001179 GO:0003755
Amo16g4152 591 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 260 374 - -
Amo16g4152 591 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 7 262 - -
Amo16g4152 591 SUPERFAMILY FKBP-like 263 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g4152 Amo-Chr16 154190665 154196887 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g4152 31 541 Calmodulin-binding Proteins AT3G25230 55.470 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4152 K09571 - gmx:100798382 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g4152 16 154190665 154196887 Amo16g4152 16 154190665 154196887 ECH