Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4115 ATGGCGGATCCATATGTCCTAGGCTGGATCCTTGTCTCTGTTCTCAGCGTCTTCGCGCTCTACAGCTTAGTTTTCGCCGGAGGAAACCGCCGCCGTCGTGCTTCGCAGGAGAACGATGCTCAGCGTACGGGGAACGTGAAAACTTCCGTCGGAGAATGTGGATCCAAGAACCTCGATGGCAACGATGCTGACGTCATCGTCGTCGGAGCTGGCGTTGCTGGCGCGGCTCTTGCTTACACACTCGGCAAGGATGGACGGCGAGTACTTGTAGTTGAAAGAGATTTGAGTGAGCCTGACAGAATTGTTGGAGAGTTGCTACAACCTGGCGGCTATCTCAAATTGATTGAGCTGGGACTTGAAGATTGTGTGGAGGAAATCGATGCTCAGAGAGTGTTTGGTTATGCACTTTTCAAGGACGGAAAAAATACATGCCTCTCTTATCCCTTGGAAAAGTTTCAGTCAGATATCGCTGGTAGAAGCTTTCACAATGGCCGTTTTATTCAGAGGATGCGGGAAAAGGCTGCCACACTGCCCAATGTCCGGTTGCTGCAAGGGTCAGTCACTTCCTTGATTGAAGAAAAGGGGACAATTAAAGGTGTTCAGTACAAGACCAAAGATGGTCAGGAGCTGAAAGTACATGCACCTCTTACCGTTGTTTGTGATGGCGGCTTCTCAAACTTGCGCCGTTGTCTTTGTAATCCTAAGGTTGATATTCCCTCTCACTTCGTTGGCTTAATTCTAGAGAATTGCCAACTTCCATATGAAAATCATGGTCACGTCATACTCGGAGACCCTTCCCCAATTCTGTTCTATCGCATAAGTAGTACAGAGGTTCGTTGTTTGGTTGATGTACCTGGGCAGAAGGTTCCTTCTATCGCAAATGGTGAAATGGAGAAGTATTTGAAGACAATGGTGGCTCCACAGATCCCCGCTGAGCTCCATGATGCCTTTTTAGCTGCAGTTGAGAAAGGCAACATAAGGTCAATATCGAATAGAAGCATGCCAGCAGATCCCCTTCCTACCCCTGGAGCCATTTTGATGGGAGATGCCTTCAACATGAGGCATCCTCTAACAGGGGGTGGAATGACCGTGGCATTGTCAGACATTGTGGTGCTGAGAAATCTTCTCAGGCCCCTGAGTGACCTGAATGACGCACCCACACTCTGCAAATACCTTGAATCCTTTTACACCTTGAGAAAGCCTGTGGCATCAACCATAAATACATTAGCAGGTGCCTTGTACAAGGTCTTCTCTGCATCTCCAGATCAAGCAAGGAAGGAAATGCGCCAAGCTTGCTTTGATTATCTGAGCCTTGGAGGCCTATGTTCCCAGGGACCAATCTCATTACTCTCAGGACTAAACCCTCGTCCTTTGAGCTTGGTGGCTCATTTCTTTGCTGTTGCAGTGTATGGTGTTGGCCGCTTAATATTTCCCTTTCCCTCGCCCAAGAAGATATGGATTGGAGCTCGGTTAATCTCTAGTGCATCTGGAATCATCTTTCCTATAATTAAGGCAGAAGGAGTTCGCCAAATGTTCTTCCCTGCAACTGTTCCAGCTTATTACAGAGCTCCTCCTGCTGCAAGATAG 1587 0.4802 MADPYVLGWILVSVLSVFALYSLVFAGGNRRRRASQENDAQRTGNVKTSVGECGSKNLDGNDADVIVVGAGVAGAALAYTLGKDGRRVLVVERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEEIDAQRVFGYALFKDGKNTCLSYPLEKFQSDIAGRSFHNGRFIQRMREKAATLPNVRLLQGSVTSLIEEKGTIKGVQYKTKDGQELKVHAPLTVVCDGGFSNLRRCLCNPKVDIPSHFVGLILENCQLPYENHGHVILGDPSPILFYRISSTEVRCLVDVPGQKVPSIANGEMEKYLKTMVAPQIPAELHDAFLAAVEKGNIRSISNRSMPADPLPTPGAILMGDAFNMRHPLTGGGMTVALSDIVVLRNLLRPLSDLNDAPTLCKYLESFYTLRKPVASTINTLAGALYKVFSASPDQARKEMRQACFDYLSLGGLCSQGPISLLSGLNPRPLSLVAHFFAVAVYGVGRLIFPFPSPKKIWIGARLISSASGIIFPIIKAEGVRQMFFPATVPAYYRAPPAAR* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4115 528 Pfam Squalene epoxidase 213 486 IPR013698 GO:0004506|GO:0016021|GO:0050660
Amo16g4115 528 PANTHER SQUALENE MONOOXYGENASE-RELATED 1 527 - -
Amo16g4115 528 Pfam NAD(P)-binding Rossmann-like domain 67 93 - -
Amo16g4115 528 PANTHER SQUALENE MONOOXYGENASE 1 527 IPR040125 GO:0004506|GO:0016126
Amo16g4115 528 Gene3D - 56 435 IPR036188 -
Amo16g4115 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 64 86 - -
Amo16g4115 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 213 228 - -
Amo16g4115 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 341 356 - -
Amo16g4115 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 356 372 - -
Amo16g4115 528 SUPERFAMILY FAD/NAD(P)-binding domain 63 437 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g4115 Amo-Chr16 153672896 153677797 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g4115 45 526 Miscellaneous Gene Families AT1G58440 77.433 0.0 782
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4115 K00511 - gmx:100804406 845.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g4115 16 153672896 153677797 Amo16g4115 16 153672896 153677797 ECH