Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4112 ATGTCTCGGAGGCCGGTGAATCCTTCGAGAAGGTTCGGAGACAGTGGCGGTGGATTGTTCTCAAGTTCGAAATCGAGGTCCTCGTCAATTTTGCCTATTGGCCTCGTAGTCTTGAGAGTTTATCTAAACCAGCTAAGATTTGGTATAGTGATAGAGTATAGTGCACCACAAATTAAAGTAGCTAAATGCGGTTTGAATCTTAAAGGTGGTCTGTTTTTCATTGTCTATATGCATAAGGGATCAGGTGGATCTGGTGGTCACTTAGATTCTGTTAGCAGGATTGAAGGTGATTATTTGTGCAGTGGAGAGGTCCAACAAGCCATTCCTATTTTACAGAAAGCATATGGAGATAGCATGCATAAAGTTTTGCATGTTGGACCTGATAGTTGTTTTGTGGTCTCCAAATTGTTAAGGCAGGAGGAAACTGAAGCTTGGGGAATTGAACCGTACGATATAGAGGATGCCGATAGTAATTGCAAAGCACTTATCCGTAGAGGCAGTGTGCGTGTGGCAGATATCAAGTTTCCTCTTCCATACAGGCCAAAATCTTTCTCACTTGTAGTCGTTTCAGATGCTCTGGATTACTTATCTCCCAGATACCTCAATAAAACACTTCCTGATTTGGCAAGGGTATCAGCAGATGGTATAGCGATATTTACTGGCCAAGATGAGAAGTTCATCCTGGTGGACCAAGTTTTTCGCTCAGATTAA 711 0.4248 MSRRPVNPSRRFGDSGGGLFSSSKSRSSSILPIGLVVLRVYLNQLRFGIVIEYSAPQIKVAKCGLNLKGGLFFIVYMHKGSGGSGGHLDSVSRIEGDYLCSGEVQQAIPILQKAYGDSMHKVLHVGPDSCFVVSKLLRQEETEAWGIEPYDIEDADSNCKALIRRGSVRVADIKFPLPYRPKSFSLVVVSDALDYLSPRYLNKTLPDLARVSADGIAIFTGQDEKFILVDQVFRSD* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4112 236 PANTHER PROTEIN, PUTATIVE-RELATED 1 39 - -
Amo16g4112 236 PANTHER PROTEIN, PUTATIVE-RELATED 60 223 - -
Amo16g4112 236 MobiDBLite consensus disorder prediction 1 26 - -
Amo16g4112 236 Gene3D Vaccinia Virus protein VP39 98 232 IPR029063 -
Amo16g4112 236 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 60 223 IPR044689 GO:0008168|GO:0045488
Amo16g4112 236 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 215 IPR029063 -
Amo16g4112 236 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 39 IPR044689 GO:0008168|GO:0045488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g4112 Amo-Chr16 153647229 153650282 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4112 K23871 - gmx:100805476 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g4112 16 153647229 153650282 Amo16g4112 16 153647229 153650282 ECH
Amo16g4112 16 153647229 153650282 Amo08g0872 08 14950061 14952793 PCT
Amo08g0872 08 14950061 14952793 Amo16g4112 16 153647229 153650282 PCT