Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0872 ATGTCGCGGAGACCGGTGAATCCATCTCGCGGAAGTGGATTGTTTTCATCTTCCAAATCAAAGTCTTCGCCAGTTTTGTCGGTTGGCCTCATAGTCCTGGGAGGTCTTTTTCTCGTTTTCTATTTACACAAGGGATCAGGTGGATCTGGTAGCCGTTTAGAGTCTGTTAACAGAGTCGAAGGTGAGTATTTATGTACTGATGAGGTCCAACGAGCAATTCCAATTTTGCAGAAAGCATATGGGGACAACCTACATAAAGTATTACATGTTGGTCCTGATACTTGCTATGTGGTATCTAAATTGCTGAAAGAGGAAGAAACTGAAGCCTGGGGTGTAGAACCATATGACATAGAGGATGCTGATAGTAATTGCAAAGCACTAATCCGCAGAGGCATTGTTCGCGTGGCCGATATCAAGTTCCCTCTTCCATACAGGCCAAAATCTTTCTCTCTTGTAATTGTTTCAGATGCCCTTGATTTCTTGTCTCCTAGATACCTTAACAAGACTCTTCCAGATTTAGCAAGGGTATCAGGAGATGGCATTGTTATATTTACTGGTCTTCCAGGCAACCAAAAGGCTAAGGTTGCAGATGTTTCTAAATTTGGAAGAGCGGCTAAGATGAGGAGTTCATCCTGGTGGGTCAAGTTTTTCCAACAAATTAACTTAGAGGAAAATGAAGCTGCTACCAAGAAGTTTGAACAGGCTTCAAAACCGGGTTCTTACGTTCCAAGATGTCAGATATTCCACCTCAAGTCTCTCAGTTAG 765 0.4275 MSRRPVNPSRGSGLFSSSKSKSSPVLSVGLIVLGGLFLVFYLHKGSGGSGSRLESVNRVEGEYLCTDEVQRAIPILQKAYGDNLHKVLHVGPDTCYVVSKLLKEEETEAWGVEPYDIEDADSNCKALIRRGIVRVADIKFPLPYRPKSFSLVIVSDALDFLSPRYLNKTLPDLARVSGDGIVIFTGLPGNQKAKVADVSKFGRAAKMRSSSWWVKFFQQINLEENEAATKKFEQASKPGSYVPRCQIFHLKSLS* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0872 254 Gene3D Vaccinia Virus protein VP39 60 243 IPR029063 -
Amo08g0872 254 PANTHER PROTEIN, PUTATIVE-RELATED 1 253 - -
Amo08g0872 254 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 253 IPR044689 GO:0008168|GO:0045488
Amo08g0872 254 CDD AdoMet_MTases 86 187 - -
Amo08g0872 254 MobiDBLite consensus disorder prediction 1 21 - -
Amo08g0872 254 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 73 215 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0872 Amo-Chr8 14950061 14952793 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0872 K23871 - gmx:100796049 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g4112 16 153647229 153650282 Amo08g0872 08 14950061 14952793 PCT
Amo08g0872 08 14950061 14952793 Amo16g4112 16 153647229 153650282 PCT