Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g3063 ATGGCTGGTTCTGCGAACCTCAATGGTGATAGTAGAATTGAGAATCTGATTTCTGCTAGGAAGTCATTGAAGCTTAGCTTAGAGAAATCAAAGTCTTTAGGGTTAGCATTGGAGAAAGCAGGGCCTAGATTGGAGGAGATTGGGCAAAGATTGCCCTCGCTTGAAGCTGCGGTTCGCCCAATTCGCGCCGATAAGGATGCTCTGGTGGCCGTCGGCGGCCACATTAATCGCGCCGTTGGTCCTGCGGCCGCGGTGCTTAAGGTATTTGATGCCGTTCATGGCCTTGAAAAGTCGCTCTTGTCGGATCCGAGAAATGATCTGGCTGGATACATGGCGGTGTTGAAGCGCCTTGAGGAGGCACTGAGGTTCTTGGGAGAGAATTGTGGGTTGGCAATTCAATGGCTGGAGGATATAGTGGAGTATTTGGAGGATAACACGGTTGCCGACGAGAGGTATCTCGCGAATTTGAAGAAGGCGTTGAAGAATCTTAGGGAGTTGCAGAATGATGAGGAGAAGGCGCGGCTTGATGGCGGGCTTTTGGAAGCTGCATTGGATAAATTGGAGAATGAGTTCCGCCAGCTCTTGACTGAGAATAGTGTGCCGCTTCCAATGGCGGCTGCGCTTGGTGATCAAGCGTGCATCGCACCATCGCCTTTGCCTGTATCTGTTATTCACAAGTTGCAAGCTATTCTTGGTAGACTGAAAGCTAATAATAGACTTGAGAAGTGCATATCGATTTATGTTGAAGTCCGTAGTTCTAATGTGAGAGCCAGTTTGCAGGCTCTCAATTTGGATTACCTTGAAATTTCGGTGTCTGAATTCAATGATGTGCAGAGCATAGAGGGGTATATAGGGCAATGGGGAAAACATTTAGAATTTGCAGTGAAACATTTGTTTGAGGCTGAGTATAAGCTTTGTAATGACGTATTCGAGAGGATGGGGCTCGATGTTTGGATGGGTTGTTTTTCGAGGATAGCTGCGCAAGCTGGTATACTAGCATTTCTTCAATTTGGGAAGACTGTCACGGAGAGTAAGAAAGACCCCATTAAACTTTTGAAGTTGTTGGATATTTTCGCGTCTTTGAACAAATTGAGGCTTGATTTCAACCGTCTATTTGGAGGAGCAGCATGTGCTGAAATCCAGAATTTGACTAGGGATCTTATTAAGAGTGTCATCGATGGTGCGGCAGAGATTTTCTGGGAACTTCTGCTACAGGTGGAGTTGCAGAGGCAGAGTCCACCCCCTCTAGACGGCAATGTTCCGAGATTGGTGAGTTTTATCACCGATTACTGTAACAAATTACTTGGTGATGACTATAAGCCAATATTGACACAGGTCTTGATCATTCACCGAAGTTGGAAGCGTCAGAGCTTTCAGGAGAAACTTCTTGTTACTGAAATTTTGAACATTGTGAAAGCTGTTGAACTGAATTTGGAAACATGGATCAAGGCTTATGAAGATCCTATGTTGATGAACTTCTTCGCTATGAACAATCACTGGCACCTTTACAAACATTTGAAAGGGACAAAGCTTGGGGATCTCTTGGGAGATTCTTGGTTAAGGGAACATGAAAATTACAAAGAATATTACTCGACAATCTTCTTGCGAGAGAGCTGGGGAAAGCTTCCTTCACACTTGAGTAGAGAAGGGCTGATTCTCTTCTCCGGAGGGCGGGCTACTGCTCGGGATCTGGTCAAGAAAAGGTTAAAAAAGTTCAATGAAGTTTTCGATGAGATGTATGGGAAGCAGTCGGGTTGGGTCATGCCGGAGCGAGATCTGAGGGAGAAGACATGTCAGCTTATAGTGCAAGCTGTGGTCCCTGTTTACCGGAGTTACATGCAGAATTACGGCCCCTTGGTCGAGCAAGAAGCTAGCTCCACAAAATATGCAAAATACACAGTGCAGAAGCTGGAGGAGATGCTTTCATGTCTTTATCGGCCAAAGCCTGTGAGGCATGCCAGTTTGAGGGGTCGGCAGTTCAGCGGAAAATATGGCAATGGAATGCCAGATCTTCGTCGTACAGCTTCTGCAGTTGTGTAG 2040 0.4603 MAGSANLNGDSRIENLISARKSLKLSLEKSKSLGLALEKAGPRLEEIGQRLPSLEAAVRPIRADKDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRNDLAGYMAVLKRLEEALRFLGENCGLAIQWLEDIVEYLEDNTVADERYLANLKKALKNLRELQNDEEKARLDGGLLEAALDKLENEFRQLLTENSVPLPMAAALGDQACIAPSPLPVSVIHKLQAILGRLKANNRLEKCISIYVEVRSSNVRASLQALNLDYLEISVSEFNDVQSIEGYIGQWGKHLEFAVKHLFEAEYKLCNDVFERMGLDVWMGCFSRIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGAACAEIQNLTRDLIKSVIDGAAEIFWELLLQVELQRQSPPPLDGNVPRLVSFITDYCNKLLGDDYKPILTQVLIIHRSWKRQSFQEKLLVTEILNIVKAVELNLETWIKAYEDPMLMNFFAMNNHWHLYKHLKGTKLGDLLGDSWLREHENYKEYYSTIFLRESWGKLPSHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMYGKQSGWVMPERDLREKTCQLIVQAVVPVYRSYMQNYGPLVEQEASSTKYAKYTVQKLEEMLSCLYRPKPVRHASLRGRQFSGKYGNGMPDLRRTASAVV* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g3063 679 Gene3D Exocyst complex component Exo70 135 653 - -
Amo06g3063 679 SUPERFAMILY Cullin repeat-like 85 645 IPR016159 -
Amo06g3063 679 Coils Coil 149 176 - -
Amo06g3063 679 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 12 666 - -
Amo06g3063 679 Pfam Exo70 exocyst complex subunit 286 642 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo06g3063 679 PANTHER EXOCYST COMPLEX PROTEIN EXO70 12 666 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g3063 Amo-Chr6 97394115 97397502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g3063 10 679 EXO70 exocyst subunit family AT4G31540 76.324 0.0 1077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g4158 16 154260786 154264143 Amo06g3063 06 97394115 97397502 hybridization
Amo16g3506 16 144771441 144773480 Amo06g3063 06 97394115 97397502 hybridization