Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03586 ATGGCCAGCGGAAGCGGCGATGCCACTTCTGCTTCTGCGTCTTCTTCCTTCTCCAGTTTTAGCGCGTATCTACACGCGCTCTCTCACACTCCTTCTCGCCTTGCAACCCGTGCCGTCTCAGTCTCCACCTCCTACGACGAGATGACCCGCCTCCGCGCCCGATCCGGCTCCCACATGCGCCGCACTCTCCGCTGGTACGACCTCGTCGCCCTCGGCGTCGGCGGCATGGTTGGTGCCGGCGTCTTCGTCACCACCGGACGCGCCGCTCACCTCTATGCTGGTCCCGCCGTTGTCCTCTCCTACGCAATTGCAGGCCTCTGCGCTCTTCTCTCCGCCTTCTGCTACACAGAGTTCGCCGTCGACATGCCAGTGGCCGGCGGCGCCTTCAGCTACCTCCGCGTGACCTTCGGTGAATTCGCGGCGTTCCTGACTGGAGCGAACCTCGTGATGGACTACGTGATGTCGAATGCGGCCGTCGCGAGAGGTTTCACGTCTTACCTCGGCACCGCAATTGGCATCTCCTCCAGCAAGTGGAGGCTGACGGTGCCGTATCTCCCTAAAGGCTTCAACCAGATAGACCTGGTGGCTGTCGCCGTCGTTCTCCTCATGACCCTCGTCATCTGCTACAGTACCAGGGAGAGCTCAGTGGTGAATATAATATTGACGGCGTTACACATTGTGTTCATAGCGTTCGTGATAGTGATGGGATTTTGGAGAGGAAGCTGGAAGAATTTCACGGAGCCGAGTGAGCCGGAGAAGTATCCGTCAGGATTCTTTCCGCACGGTGCTTCGGGTGTGTTCGTGGGGGCTTCAGCGGTTTACATGAGTTACATTGGATACGACGCCGTATCGACGATGGCTGAAGAAGTGAAGGAACCAGTGAAGGACATACCGATCGGTGTGTCAGGGTCGGTGGCTATTGTCACTGTTCTCTATTGCCTCATGGCAGCATCCATGTCCAAACTTCTCCCATACGACTTGATCGATGCGGAAGCGCCGTTTTCGGCGGCGTTCAGTGGGAAATGGGTGTCGCGGGTGATAGGAGTGGGGGCCAGCTTCGGGATCTTGACGTCGCTGTTAGTTGCAATGCTTGGTCAGGCCCGTTACATGTGCGTCATCGGACGGTCTGGCGTGGTCCCCACTTGGTTCGCCAGGGTCCACCCTAAAACTAACACCCCTGTCAACGCCTCCGCTTTTCTTGGCACACTGTTTGTGTTCTACATGGTGGCAAACGCAGTAATCTACAGGCGATACGTGGCAATTGGAACAACGAATCCATGGCCTACAATGTCCTTCCTCTGCTCATTTTCCATGACAAGTATAATCTTCACTCTTATATGGAAGTTCGTACCAACAGGGAATGCCAAAGCAGGGTTGCTAAGTGGGTGCGCTGTGATTGCCGTTGGAATTCTGCAAGTGTTTCAGTGCATGGTCCCTCAAGCAAGGAAGCCAGAATTCTGGGGTGTCCCACTCATGCCATGGATTCCATCCTTCTCAATCTTCCTCAACGTTTTCTTGCTTGGTTCTCTTGATGGCCCATCCTATCTTCGCTTCGCCTTCTTTTCTGCTCTTGCTGTACTTTTCTATGTTTTTTACAGTGTCCATGCCAGCTTTGATGCTCAGGCCCATGGATCCCTTCTTCAAAAGATCACTTATGATCATCCTCATGTGGAACCCATGGAATTTCAGGATCTCACTTTCAAAGTCTAG 1710 0.5444 MASGSGDATSASASSSFSSFSAYLHALSHTPSRLATRAVSVSTSYDEMTRLRARSGSHMRRTLRWYDLVALGVGGMVGAGVFVTTGRAAHLYAGPAVVLSYAIAGLCALLSAFCYTEFAVDMPVAGGAFSYLRVTFGEFAAFLTGANLVMDYVMSNAAVARGFTSYLGTAIGISSSKWRLTVPYLPKGFNQIDLVAVAVVLLMTLVICYSTRESSVVNIILTALHIVFIAFVIVMGFWRGSWKNFTEPSEPEKYPSGFFPHGASGVFVGASAVYMSYIGYDAVSTMAEEVKEPVKDIPIGVSGSVAIVTVLYCLMAASMSKLLPYDLIDAEAPFSAAFSGKWVSRVIGVGASFGILTSLLVAMLGQARYMCVIGRSGVVPTWFARVHPKTNTPVNASAFLGTLFVFYMVANAVIYRRYVAIGTTNPWPTMSFLCSFSMTSIIFTLIWKFVPTGNAKAGLLSGCAVIAVGILQVFQCMVPQARKPEFWGVPLMPWIPSFSIFLNVFLLGSLDGPSYLRFAFFSALAVLFYVFYSVHASFDAQAHGSLLQKITYDHPHVEPMEFQDLTFKV 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03586 569 Pfam C-terminus of AA_permease 487 537 IPR029485 -
Aip09g03586 569 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 13 555 - -
Aip09g03586 569 Gene3D Amino acid/polyamine transporter I 58 544 - -
Aip09g03586 569 Pfam Amino acid permease 64 471 IPR002293 GO:0016020|GO:0022857|GO:0055085
Aip09g03586 569 PANTHER AMINO ACID/POLYAMINE TRANSPORTER I, CATIONIC AMINO ACID TRANSPORTER-RELATED 13 555 - -
Aip09g03586 569 PIRSF AA_transporter 46 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03586 Aip-Chr9 142589671 142592665 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03586 150 561 Organic Solute Cotransporters AT3G10600 68.265 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03586 - - gmx:100816464 870.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03586 09 142589671 142592665 Aip09g03586 09 142589671 142592665 ECH