Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02272 TTGTATTTTTTGGTTTTGACAGCTGCGGATGAACTTGTTAGGAAGAAACCTCATGGTGATTCTTCAACGGTTGAACTCAATAATTCCAACATGGTTCCTTCAAAGGGTGGAAGCTCTCCATCAGATGCAAGATCATGTGTGTCATCTGTAGGAGATGCATCTGGGAGTGGTAAAGAAGGAGATGTGGATCATGAGTACCTTGCCATGGATCAGAGTGTTCCTTTTCCTGGTGGTGGCTATTATGGCTACTACTATCCAGGTTATGGTGGTTTCTTTGGAGAGCCAGATAATCAAGGATACTATGTTGGTGCTGATGCAGTTGATCTTCAGTATCCTGTTGTGCCAGCAGATAATGGATCTTATGCCTATCTCATGCCAGGATTTCAGACTGGCTACTCTTCATACTTTGCTCTGAATACAGCTGGCGTCGACGGGCAGTATGTTGGCCATCAAGTGTATCCCCCTGGCTCCATATTCCAACAACCAATTGGTTCACCTGGGTACTTCTCGGCTTCTCTACCTTATGGGGAGTTTCTGCCGTCAACACATTTGTGGGATTTGTCTTCAACCACACAAGATCGGTCACAAGGTGATGGCCGTAATGAGTTTTCCGGGAAACCAAGTGGTAGAACCAATTTGTCTACACAGAATCATGCGGGTGGTATAGTGTCAAAGTCCCCACATGCAGCTAACTTAACCAATCAATTGGAAGCGAAGGGTTCAACCCCATCGTTGGATGTATTGTCAACTCATGTTAAGCCAAAACAAGTTAACAAGGCACCGTTTTCGGCCCTCCATTCAGAAACAATGGCAAAGGGTTGTTTGTCTGTCGCCAAATTTCCAACATACAATCAAGGGAAGAGTGGATACCTCTATCCGAATAACTTGCTTAACGTGAAAGCATCTACAAAGAGTTGGGTTAGTACTGACAAGTTAAAACTGCGAAGCAAGGTTAATGGTTCGCTCAATGAGCAAAATCAGGGTCCTAGAACGACTAATGTGAAAGGTTCATCTGTATCTGTGGGAGCTGGGAGTGGAAATGCTAGTAGCAAAATCAGGATAGATCTATATAACAGTCCTGATTTTGTGACCAAATATGATCATGCACTTTTCTTCGTCATCAAATCATACAGCGAAGATGATGTCCATAAGAGCATCAAGTACAATGTGTGGGCAAGTACTCCTAACGGGAATAAGAGGTTGGATAGTGCATTTCAGGATGCACAAAAGCGGATGGAAGAGAAAGGAAGCAAGTGCCCCGTATTCCTTTTCTTTTCGGTCAATGCCAGTGGTCAATTTTGTGGAGTAGCCGAGATGACCGGGCGAGTCGATTTCAATAAAAGTATGGATTTCTGGCAACAAGACAAATGGAATGGATACTTCCCTGTCAAATGGCACATCATAAAGGATGTTCCAAATCCTCAGCTACGACATATAATCCTAGAGAATAACGATCATAAGCCAGTAACAAATAGTCGAGACACACAAGAGGCAAGTCTTGTTTGTTTCCAGGTGAGTTTTGCGCAAGGTATCGAAATTCTCAACATCTTTAAGAACTATATAGCAAGAACATCCATATTGGACGATTTTGAATTCTATGAGAGCCGCCAGAAGGTCATGCAGGAAAAGAAAATGAGGCAGTCTGTGCCCCACGCCAACATGCAGCATGTAGATGAATTAACAACTACACTTGAGTCATTAGACATATCAAATGTGAAGAACAACAACATGATGCAGGATCCGAAGTTGGTTGAGAAAGTGAAAGATTGA 1770 0.4305 LYFLVLTAADELVRKKPHGDSSTVELNNSNMVPSKGGSSPSDARSCVSSVGDASGSGKEGDVDHEYLAMDQSVPFPGGGYYGYYYPGYGGFFGEPDNQGYYVGADAVDLQYPVVPADNGSYAYLMPGFQTGYSSYFALNTAGVDGQYVGHQVYPPGSIFQQPIGSPGYFSASLPYGEFLPSTHLWDLSSTTQDRSQGDGRNEFSGKPSGRTNLSTQNHAGGIVSKSPHAANLTNQLEAKGSTPSLDVLSTHVKPKQVNKAPFSALHSETMAKGCLSVAKFPTYNQGKSGYLYPNNLLNVKASTKSWVSTDKLKLRSKVNGSLNEQNQGPRTTNVKGSSVSVGAGSGNASSKIRIDLYNSPDFVTKYDHALFFVIKSYSEDDVHKSIKYNVWASTPNGNKRLDSAFQDAQKRMEEKGSKCPVFLFFSVNASGQFCGVAEMTGRVDFNKSMDFWQQDKWNGYFPVKWHIIKDVPNPQLRHIILENNDHKPVTNSRDTQEASLVCFQVSFAQGIEILNIFKNYIARTSILDDFEFYESRQKVMQEKKMRQSVPHANMQHVDELTTTLESLDISNVKNNNMMQDPKLVEKVKD 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02272 589 Pfam YT521-B-like domain 371 498 IPR007275 GO:0003723
Aip08g02272 589 ProSiteProfiles YTH domain profile. 369 510 IPR007275 GO:0003723
Aip08g02272 589 PANTHER OS01G0679900 PROTEIN 25 560 - -
Aip08g02272 589 MobiDBLite consensus disorder prediction 22 52 - -
Aip08g02272 589 Gene3D ph1033 like domains 347 532 - -
Aip08g02272 589 MobiDBLite consensus disorder prediction 16 62 - -
Aip08g02272 589 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 25 560 IPR045168 -
Aip08g02272 589 MobiDBLite consensus disorder prediction 319 342 - -
Aip08g02272 589 MobiDBLite consensus disorder prediction 189 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02272 Aip-Chr8 95954712 95958354 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02272 K20102 - gmx:100812429 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g02272 08 95954712 95958354 Aip08g02272 08 95954712 95958354 ECH