Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02025 ATGGCCGTTGAGGCTCGCCATCTCAATCTCTTCCCTTCGCAACTCATAAGCAATAGGGAAATGATGAATTCCATTGAGACAAACATGAATCTGAATTTATACAACGCTCAGCTTGGTTACTCATCCTTGCTTCCGTTATCCGGCACAACTACAACCGCTGCTGCCGGCGTCGGAACAGAGGCCATGCTCCCGCCGGCGATGTATAGTTCAATTGCTGCAGATTCCCTGCCTCAACAACAAAAGACTCCAATAAAATCGGAAAGCACTCTCACCTACAATAACATTCCTTTGTCGAGAAAACGATCAAGAGACACGTCAGGTTCCATCAACTACACTTTCCCCTCTTCGTACCCCGCCACAGCCTCCACCGTCACAGTTCAACCACATCACAAAAATTGTGGCTCTTTTACCTTTTTAGGGGAAGACATTACCCTCCAGATCCATCAGCAACAGCTTGACATCGATCAACTTGTTGCACAACGCATGGAGAAAGTGAGGATGGAGTTAGAAGAGAAGCGCAAGAGACATGCAAGGAGAATCATGGAAGCAATAGAAGTAAGTGTGATGAAGAGGCTGAAAGCAAAAGAGGATGAAATAGAGAAAATGGGGAAACTGAATTGGGCGTTAGAAGAGAAAGTCAAGTCTTTATGCATAGAGAATCAGATATGGCGTGATTTGGCACAAACGAACGAGGCAACAGCAAATGCTCTCAGAACGAACCTGGAACAAGTCCTCGCCCAACGCGGCGGCGGCGGCGCCGTGGAAGACGATGGCGCTACCGTGTGCCCGGGCGGAGCAGCGACTGCGGCAGTGATGGACGATGCGGAGTCTTGCTGTGGAAGCAGTGATGATTGTGGCGATAAGAATTTGGAAGAGAAGGTGGTGGAAAGTTGTGGTGGTGGGTGGCGCACGTTAGCGGGGGTTAGTGCGCAGGATAAGGGAGGGAGGTTGTGTAAGAACTGTGGGAAGGGGGAATCGTGCGTGCTGATATTGCCTTGCAGGCACCTATGCTTGTGTACTGTTTGTGGGTCTAGTCTTCACACTTGTCCCATTTGTAAATCCGTCAAGACTGCTAGCGTTCATGTTAACATGTCCTAA 1098 0.4918 MAVEARHLNLFPSQLISNREMMNSIETNMNLNLYNAQLGYSSLLPLSGTTTTAAAGVGTEAMLPPAMYSSIAADSLPQQQKTPIKSESTLTYNNIPLSRKRSRDTSGSINYTFPSSYPATASTVTVQPHHKNCGSFTFLGEDITLQIHQQQLDIDQLVAQRMEKVRMELEEKRKRHARRIMEAIEVSVMKRLKAKEDEIEKMGKLNWALEEKVKSLCIENQIWRDLAQTNEATANALRTNLEQVLAQRGGGGAVEDDGATVCPGGAATAAVMDDAESCCGSSDDCGDKNLEEKVVESCGGGWRTLAGVSAQDKGGRLCKNCGKGESCVLILPCRHLCLCTVCGSSLHTCPICKSVKTASVHVNMS 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02025 365 Coils Coil 159 186 - -
Aip08g02025 365 Coils Coil 192 212 - -
Aip08g02025 365 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 305 364 IPR013083 -
Aip08g02025 365 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 364 IPR017066 -
Aip08g02025 365 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 1 364 - -
Aip08g02025 365 ProSiteProfiles Zinc finger RING-type profile. 318 353 IPR001841 -
Aip08g02025 365 Pfam Zinc finger, C3HC4 type (RING finger) 316 355 - -
Aip08g02025 365 PIRSF SBP1_RNase_bind 1 365 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02025 Aip-Chr8 62961381 62963196 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02025 312 354 Miscellaneous Gene Families AT4G39050 39.535 4.10e-07 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g02025 08 62961381 62963196 Aip08g02025 08 62961381 62963196 ECH