Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03461 ATGGAGGGAAAACACTCTGTTCCAAGTATGACCAAGCCTACTAATATCATACAAAATCATGACTTCTCTGAAGGGCTAAGCTTTTGGCATCCGAATGGCTGCGACGGCTATGTTGCTTCAACTGAACCAGGTCCTCAAGGAGGAGTGACAATGACATTAGGTGCTAAATATGCTGTTATCACAAACAGAAAGGAATGGTGGCAAGGTCTTGAGCAAGATATCACCGGAAAAGTCTCTGTCGCTTCCACTTATGCTGTTTCGGCCAATGTTGGAGTAGCTGCACTTTCTGAGGGATCTGCTGATGTTCTAGCTACCCTGAAACTAGAGTATCATGGTTCTGATGCAAGCTACCTGTTCCTTGGGAGAACTTCTTGTACAAAGGGTAGCTGGGAAAATCTGAAAGGGACATTTTCATTGTCAACTATGCCTGATCGAGTTACATTTTATTTGGAAGGACCTGCTCCTGGAGTTGACCTTCTTATACAATCAGTAGAGATTACCTGCTCTAGTTCAAGTGATATTGAGGATCATGCAAAAACAACAGGAACTTTGTCAACTGAAGATGATAACATCATAATAAACCCACAATTTGATGATGGCCAGAATAACTGGTCTGGAAGAGGCTGCAAGATCGCAATACATGACTCACTGGGAAATGGAAAAGTCCTTCCCAAGAATCCGGATTCTCGAGAGCAGTATATAGGAATTGCCAATGTGCAGGCAACAAATCAAGATTGGGTTCAATTGCAGGGAAAGTTCCTTATAAATAATTCCCCATCAAAAGTGGTTGTTTATTTAGAAGGTCCCCCAGCAGGCATTGACATTCTTGTCAATACTATTGTTATAAAACATGCTCCCAAGACAGCTCCATCAACGCCACCAGATTTTGAGGATGCTCCTTTTGGGATTAATATAATTGAGAATAGTAATCTGGCTAATGGCACCAATGGATGGTTTCCCCTTGGTAATTGTACTCTGAGTGTTGGAACCGGTTCGCCACGTGTGCTTCCACCAATGGCAAGAGACTCTCTTGGACCTCACGAGTCGTTGAGTGGCCGCTATGTCCTTGTAACGAACCGCACCCAAACATGGATGGGGCCTGCTCAGATGATCACTGAGAAATTGAAGCTGTTCTTAACATACCAAGTGTCTGCTTGGGTGAGGATTGGTTCAACAGGATCAGTTGGTCCTCAGAATGTGAATGTTGCCCTTAGTGTTGACGATCAGTGGGTGAATGGAGGACAAGTTGAGGTTGCTGATGACAGATGGCATGAAATTGGTGGATCATTTAGAATTGAGAAGCAACCATCAAAGGTTATGGTTTATATTCAAGGTCCTGCTTCTGGTGTTGATTTGATGATTTCTGGACTTCAAATCTTCCCTGTTGATAGACAAGCAAGGTTTAGATATTTAAGGAGGCAGACAGACAAGGTTCGAAAGCGCGATGTAATCTTGAAATTCTCTGGGCTGGAGGACATAAGTGGTCTAGGAACTTTGGTTAAAGTGAGGCAAATACAGAACGATTTTCCAATTGGAACATGCATCAACAGAACAAACATTGACAATGAAGACTTTGTTGACTTCTTTGTGAAGCATTTTAACTGGGCTGTGTTTGGGAATGAGTTGAAGTGGTATTGGACAGAACCACAACAGGGGAATATCAACTACAAAGATGCTGATGAAATGTTAGACTTATGCCTCAAGAACAAGATAGAAACCCGCGGCCACTGCATCTTCTGGGAAGTAGAAGGCACAGTTCAGCAGTGGATCAAATCACTGAACAAAGACGATTTGATGAAAGCAGTCCAAAATCGGTTAAGCAGCCTCTTGAATCGGTACAAGGGCAAGTTCAGGCACTATGATGTTAACAATGAAATGCTGCATGGTTCATTTTATCAAGACAGGCTTGGTAGAGACATAAGAGCAAACATGTTCAAGGCAGCACACCAATTAGACCCATCTGCTACTCTCTTTGTGAATGATTATCACATTGAAGATGGAAACGACACAAGATCAACACCAGAGAAATACATTCAACAGATTCTTGATTTGCAACATCAAGGTGCACCAGTTGGTGGAATTGGAATTCAAGGACACATAGATAGTCCTGTGGGGCCTATTGTTTGTTCTGCACTTGATAAATTAGGGACTCTTGGTTTACCAATATGGTTCACTGAGCTTGATGTTTCTTCAAGAAATGAGTATGTTAGAGCTGATGATTTGGAAGTTATGATGAGGGAAGCCATGGCACACCCTTCAGTAGATGGCATAATGCTGTGGGGATTCTGGGAATTGTTTATGAGCAGAGAGAATTCACACTTGGTGAATGCAGAAGGTGATGTTAATGAAGCTGGAAAAAGGTTACTTTGTCTTAAACAAGAGTGGTTGTCTCATAGCCATGGCTGTATTGATGATCAAGGGATATTCAGCTTCAGAGGCTTCAGTGGAACATACAATGTTGAAGTTGTAACATTATCTAAGATTGTTTCAAAGACATTTGTTGTTGATAAAGGTGACTCTCCTTTGGAGGTAGAGGTATCCTTTAACTAG 2550 0.4208 MEGKHSVPSMTKPTNIIQNHDFSEGLSFWHPNGCDGYVASTEPGPQGGVTMTLGAKYAVITNRKEWWQGLEQDITGKVSVASTYAVSANVGVAALSEGSADVLATLKLEYHGSDASYLFLGRTSCTKGSWENLKGTFSLSTMPDRVTFYLEGPAPGVDLLIQSVEITCSSSSDIEDHAKTTGTLSTEDDNIIINPQFDDGQNNWSGRGCKIAIHDSLGNGKVLPKNPDSREQYIGIANVQATNQDWVQLQGKFLINNSPSKVVVYLEGPPAGIDILVNTIVIKHAPKTAPSTPPDFEDAPFGINIIENSNLANGTNGWFPLGNCTLSVGTGSPRVLPPMARDSLGPHESLSGRYVLVTNRTQTWMGPAQMITEKLKLFLTYQVSAWVRIGSTGSVGPQNVNVALSVDDQWVNGGQVEVADDRWHEIGGSFRIEKQPSKVMVYIQGPASGVDLMISGLQIFPVDRQARFRYLRRQTDKVRKRDVILKFSGLEDISGLGTLVKVRQIQNDFPIGTCINRTNIDNEDFVDFFVKHFNWAVFGNELKWYWTEPQQGNINYKDADEMLDLCLKNKIETRGHCIFWEVEGTVQQWIKSLNKDDLMKAVQNRLSSLLNRYKGKFRHYDVNNEMLHGSFYQDRLGRDIRANMFKAAHQLDPSATLFVNDYHIEDGNDTRSTPEKYIQQILDLQHQGAPVGGIGIQGHIDSPVGPIVCSALDKLGTLGLPIWFTELDVSSRNEYVRADDLEVMMREAMAHPSVDGIMLWGFWELFMSRENSHLVNAEGDVNEAGKRLLCLKQEWLSHSHGCIDDQGIFSFRGFSGTYNVEVVTLSKIVSKTFVVDKGDSPLEVEVSFN 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03461 849 SUPERFAMILY Galactose-binding domain-like 13 169 IPR008979 -
Aip07g03461 849 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 496 791 IPR001000 GO:0004553|GO:0005975
Aip07g03461 849 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE PROTEIN 14 168 - -
Aip07g03461 849 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE PROTEIN 226 846 - -
Aip07g03461 849 ProSitePatterns Glycosyl hydrolases family 10 (GH10) active site. 719 729 IPR031158 -
Aip07g03461 849 Gene3D - 9 168 - -
Aip07g03461 849 Gene3D - 216 284 - -
Aip07g03461 849 Gene3D - 301 460 - -
Aip07g03461 849 PRINTS Glycosyl hydrolase family 10 signature 573 585 IPR001000 GO:0004553|GO:0005975
Aip07g03461 849 PRINTS Glycosyl hydrolase family 10 signature 687 699 IPR001000 GO:0004553|GO:0005975
Aip07g03461 849 PRINTS Glycosyl hydrolase family 10 signature 655 666 IPR001000 GO:0004553|GO:0005975
Aip07g03461 849 SUPERFAMILY Galactose-binding domain-like 302 463 IPR008979 -
Aip07g03461 849 Gene3D Glycosidases 496 798 - -
Aip07g03461 849 SUPERFAMILY (Trans)glycosidases 500 799 IPR017853 -
Aip07g03461 849 PANTHER GLYCOSYL HYDROLASE 14 168 IPR044846 GO:0004553|GO:0005975
Aip07g03461 849 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE PROTEIN 178 225 - -
Aip07g03461 849 SMART glyco_10 542 792 IPR001000 GO:0004553|GO:0005975
Aip07g03461 849 Pfam Carbohydrate binding domain 304 448 IPR003305 GO:0016798
Aip07g03461 849 Pfam Carbohydrate binding domain 15 155 IPR003305 GO:0016798
Aip07g03461 849 Coils Coil 774 794 - -
Aip07g03461 849 Pfam Glycosyl hydrolase family 10 505 762 IPR001000 GO:0004553|GO:0005975
Aip07g03461 849 PANTHER GLYCOSYL HYDROLASE 226 846 IPR044846 GO:0004553|GO:0005975
Aip07g03461 849 PANTHER GLYCOSYL HYDROLASE 178 225 IPR044846 GO:0004553|GO:0005975
Aip07g03461 849 SUPERFAMILY Galactose-binding domain-like 188 287 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03461 Aip-Chr7 124443972 124448276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03461 14 848 Glycoside Hydrolase AT1G58370 62.458 0.0 1154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03461 - - gmx:100818319 1282.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03644 06 133801716 133811150 Aip07g03461 07 124443972 124448276 PCT