Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03682 ATGGGCGAAATCTACAAAATCAACTCAATAAATTGGAAACCCTCTCCGGTAATCGCTCTTGCCACCAGCGTCGACGGCCTCCGTGTAGCCGCAGCTCGCCAAGACGGTTCCCTTGAACTCTGGCTCGTATCTCCCGGCTCCATTGGCTGGCACTGTCAACTTACGATTCATGGTGACCCTACTACAAGAGTATCTTCGCTTCTTTGGTGCCCTGGCGGCTCCAATGGCATGCCGTGCGGTCGTTTATTTTCGTCTAACATTGATGGTTCAGTTTCCAAGTGGGATCTTTTCCACCTGAAGCAAACGACTGTGCTTGATTCAGATGGTGTTTGCATTTGGCAAATGGCTGTTACGTTCCCTAAGGTTGATTTAGTTAATAATGTGCCTAATGGTGATGTTATGGGGAATGGTTATGCCAGTAAAATTCAAGAATCTGATGAACAAGAGAGCAGCGATAGTGACGAAGATAATGACTCACCTGATGCTGGCAAGCAATCTGTTCTTGAGTCTCCACGTGTAGCAATTGGTTATGATGATGGAAGTGTGAGGATTTATGCCGTATCTGATGAAGATGAATTCCTATATGTAAAATCATTGCCTCGGGTCAAAGGACGAGTTTTAAGTGTGACTTGGAGCACTGATGCTAACTACATATACTCCGGAAGTAGTGATGGGTTAATACGATGCTGGGATGCTACGTCTAGTCATGAAGTTTATAGGATTACGGCTGGGCTTGGAGGTTTGGGTGGCGGACATGAACTTTGCATATGGTCGTTACTGTCTTTAAGGTCTGGGACGCTTGTTAGTGCAGACAGCAGTGGCAGTGTCCAATTTTGGGATAGTAAACATGGAACTCTCTTGCAAGCACATTCATTGCACAAGGGTGATGTAAATGCTTTGGCTGCATCCCCAAGTCATGATAGGGTGTTCTCGGCTGGTTCTGATGGCCAGGTTATTCTCTATAAGCTGTCTAGCCAGTCAGCATCTTCCGACAGTGTCAACCCCACTGTGATGACAAAGAAATGGATCTATGTTCACTATGTTAGGTCTCATACACATGATGTCAAGGCCTTGACTGTTGCTGTGCCGATATCTCAAGAAGATTCTCTGCCAGAAGAGAGGAATAAAAGACGTCGGCTTGAAGGAAAGCCTGTTGATTTAAATTATCATAAATGGTCCCAATTTGGGGTTCCCATGCTTATCTCAGCAGGAGATGACACAAAACTATTTGCATACCCGGTAAAGGAATTCACTAAGTTTTCTCCTCATGATATTTGTCCTGCGCCTCAGAGAACCCCAGTTCAACTAGTGCTTAATACTGCCTTCAATCAATCATCAATGCTTTTAGTCCAGTCTAGGCAATGGTTAGATGTACATTTACTACATCTTGGAAATGTTCGTACAGCTGGATGCTTTACTAAGACTGAAATCCTTGCACGAGTGAAGACTAAGGAATCTCGGAAGATTGCTTGCAGCACAATTGCTAATTCTGGGGAGCATTTTGCATACTCTGATAATGCAAGGCCTAGTCTGTTTGAGTTAAAGAGGAGTGGAGTTGGAAAGATTACATGGAGCGTGAGTAGAAAGAAGCTTCCCCCGAGGTTACCCTTTGCCCATTCAATGATTTTCACCCATGAGTCATCCTGGTTGATACTAGCTGGCCATGATAGGAGGATATATGTTGTGGATGTCAGCACATCGGAACTAGTGCATGCTTTTACACCCTGTCGGGAGCTGGATGACGAGAAATTGCCTCCGAAGGAACCTCCCATTACTAGATTATTTACCAGTTCCGACAGGCAGTGGCTGGCAGCTGTTAACTGCTTTGGCGATATATATGTGTTTAACTTGGAGACACTAAGGCAGCACTGGTTCATCTCAAGATTAGATGGTGCCTCTGTCACGGCTGGTGGGTTTCCTCCCCAGAACAACAATGTAATGATAGTTACAACTTCTTCGAATCAAGTGTATGCATTTGACGTGGAGGCCAAGCAATTGGGAGAATGGTCGATGAGGAATACATATGTTCTTCCCCGGAGATTCCAGGAGTTTCCCGGCGAAGTCATTGGGCTTTCATTTCCTCCCTCATCAACTTCATCATCAGTTGTTATTTATAGCTCCAGGGCAATGTGCTTGATTGATTTTGGATTACCGGTGGAGCAAGACGAAAGCGATATGCTAAATGCTCAAGAATCATTGGCCAAGAACTTGCAACAAAACTTTACTAATGTTAAGAAGAGGACAAAATTTAGGAGAAACTTTGACGTATTTTCATTAGATAACCCAGTTTTATTTTTAGCTCATGTCTCAAAAAATTCCTTCTTTATGGTAGAAAAGCCATGGCTGGAAGTGGTTAAAAGACTAGAAGCCCCACCAGTTCATAAACATATTTTTGGCACCTAA 2403 0.4403 MGEIYKINSINWKPSPVIALATSVDGLRVAAARQDGSLELWLVSPGSIGWHCQLTIHGDPTTRVSSLLWCPGGSNGMPCGRLFSSNIDGSVSKWDLFHLKQTTVLDSDGVCIWQMAVTFPKVDLVNNVPNGDVMGNGYASKIQESDEQESSDSDEDNDSPDAGKQSVLESPRVAIGYDDGSVRIYAVSDEDEFLYVKSLPRVKGRVLSVTWSTDANYIYSGSSDGLIRCWDATSSHEVYRITAGLGGLGGGHELCIWSLLSLRSGTLVSADSSGSVQFWDSKHGTLLQAHSLHKGDVNALAASPSHDRVFSAGSDGQVILYKLSSQSASSDSVNPTVMTKKWIYVHYVRSHTHDVKALTVAVPISQEDSLPEERNKRRRLEGKPVDLNYHKWSQFGVPMLISAGDDTKLFAYPVKEFTKFSPHDICPAPQRTPVQLVLNTAFNQSSMLLVQSRQWLDVHLLHLGNVRTAGCFTKTEILARVKTKESRKIACSTIANSGEHFAYSDNARPSLFELKRSGVGKITWSVSRKKLPPRLPFAHSMIFTHESSWLILAGHDRRIYVVDVSTSELVHAFTPCRELDDEKLPPKEPPITRLFTSSDRQWLAAVNCFGDIYVFNLETLRQHWFISRLDGASVTAGGFPPQNNNVMIVTTSSNQVYAFDVEAKQLGEWSMRNTYVLPRRFQEFPGEVIGLSFPPSSTSSSVVIYSSRAMCLIDFGLPVEQDESDMLNAQESLAKNLQQNFTNVKKRTKFRRNFDVFSLDNPVLFLAHVSKNSFFMVEKPWLEVVKRLEAPPVHKHIFGT 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03682 800 Gene3D - 126 431 IPR015943 GO:0005515
Aip06g03682 800 ProSiteProfiles Trp-Asp (WD) repeats profile. 290 331 IPR001680 GO:0005515
Aip06g03682 800 Gene3D - 5 125 IPR015943 GO:0005515
Aip06g03682 800 Gene3D - 522 716 IPR015943 GO:0005515
Aip06g03682 800 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 800 IPR044622 GO:0010073|GO:0035266
Aip06g03682 800 SUPERFAMILY WD40 repeat-like 7 326 IPR036322 GO:0005515
Aip06g03682 800 SMART WD40_4 528 563 IPR001680 GO:0005515
Aip06g03682 800 SMART WD40_4 3 42 IPR001680 GO:0005515
Aip06g03682 800 SMART WD40_4 234 280 IPR001680 GO:0005515
Aip06g03682 800 SMART WD40_4 283 322 IPR001680 GO:0005515
Aip06g03682 800 SMART WD40_4 192 231 IPR001680 GO:0005515
Aip06g03682 800 SMART WD40_4 49 95 IPR001680 GO:0005515
Aip06g03682 800 Coils Coil 727 747 - -
Aip06g03682 800 ProSiteProfiles Trp-Asp (WD) repeats profile. 199 240 IPR001680 GO:0005515
Aip06g03682 800 SUPERFAMILY WD40 repeat-like 251 710 IPR036322 GO:0005515
Aip06g03682 800 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 199 234 - -
Aip06g03682 800 MobiDBLite consensus disorder prediction 143 165 - -
Aip06g03682 800 Pfam WD domain, G-beta repeat 206 231 IPR001680 GO:0005515
Aip06g03682 800 Pfam WD domain, G-beta repeat 293 321 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03682 K14548 - gmx:100797494 1144.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03682 06 134355148 134361329 Aip06g03682 06 134355148 134361329 ECH