Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03669 ATGGTTCTGCTTTTTGAACAGGATTCTGTGATTTTGGATGTCAAAGGCATCCTTAGGTCCCAGCAATTCTTCTGGGATTATACTGTTAAAATGGCCAATAATTCTCAGCCCCCTGGTATGCAGTTTCGGCCAGTCATTCAGGCCCAGCAAGGTCAGCCATTTGCTCCAATGGCTTCCCAACAATTTGGACTTGCAGGACATGCTATTCCTTCTTCAAATGTTGCAATGCCTGTTGGTCAGAGTCAGCAATTGCAGTATTCACAACCAATGCAGCAGTTGCCTCCAAGACATATTCAGCCTGGTCAACCTGCACCTTCGTCGCAGGTTATACCTATGCAATATATCCAAACAAATAGACCCCCGACATCCGTCCCACCACATTCACAGCCAACTGTTCCCCACTTAAGCAGTCATATGCCCAGCTTGGCTGTTTCAGCAGCAACTTCTCATTCTTCATATACTTTTCAACCACCGTATAGTCAGCAGCAGGATAATGTTAATGCAATGGCTCAGTACCAGCAATCGGGCCAAATGCATGCTCCTCCGGCTGGACAACCTTGGGTGTCCTCTGTTTCTCAGAGTGCTGCAACTGTTACACCAGTGCAACAGGCTGGAGTGCAATCATCTGGTACTCCGTCAACTGATTCTGCAACAAGTGCCCCTAACCAGCAGTCAGCATCTGATTGGCAAGAGCATACTGCAGCTGATGGCAGAAGATATTACTACAACAAGAGGACAAGGCAATCTAGTTGGGAGAAACCATTGGAACTGATGTCACCTATTGAGAGGGCTGATGCATCAACTGTTTGGAAAGAATTCACATCTTCAGATGGAAGAAAGTATTATTACAACAAGGTTACTCAGCAATCAACATGGTCAATACCAGAGGAACTTAAGTTGGCTCGTGAATTGGCGCTGAAAGCTGCCAATCAGGGAATGCAGTTAGAAACAAGTGATACATCGAATACTGCTGTTTCATCTGCTGCACCATCAACAGTGACTAATACTGCTAGCTCAAACACTCCTTTGACATCAAATGGGCTTGCTTCAAGTCCAGCATCTGTCACACCAATTGCATCGTCAACTGGTCCTCAGCAGTTGGTTTCTGGATTATCAAGTACCACTGGGACTGAACTGAGTACTGTGGTAACTGCGTCTACGGCAGTAGCTGGACCTGCAAATCCTCTTGACACCACTACACCGTCCAGTGTTGAAAATCAAGCATCTCAGGATTTTGCTGCTCCTACCGGTGGAGCTTCTGTTAAAGATATAGAGGAAACCAAAAAAGGATTGCCAGTTGCTGGAAAAGTTAATGTGACTCTGCCAGAGGAGAAAGCAAATGATAAAGAAACCTTTGCATATGCAAATAAGATGGAAGCAAAAATTGCATTTAAGGCACTATTGGAGTCTGCTAATGTTCAGTCTGATTGGACATGGGAACAGGCGATGAGAGAAATAATCAATGACAAAAGATACAATGCTCTAAAAACACTTGGTGAGCGGAAACAAGCTTTTAATGAGTATTTGGGCCAAAGGAAGAAGCTAGAGGCTGAAGAGAGACGCATGAAGCAGAAAAAAGCTCGAGAAGAATTCACAAAGATGTTGGAAGAGTGCAAGGAGCTAACTTCATCCATGAGATGGAGCAAAGCAATCAATATGTTTGAAAATGATGGACGGAATTTAGCAGAATACAGGAAATTCTTGGAGTCATGTGATTATGTGAAGGTTCACAGTCCATGGCGAAAAGTCCAAGATCGGTTAGAGGACGATGATAGATATTTACGGCTTGAAAAAATTGACCGCTTGCTTGTTTTCCAGGACTATATTCGTGAATTGGAAAAGGAAGAAGAGGAGCAAAAACGAGTACAGAAGGAGCGAGTTCGTCGTGGTGAAAGGAAAAATCGTGATGCATTCCGCAAGTTGTTGGAAGAACATGTTGCTGCTGGAATTCTTAATGCTAAAACTCAATGGAGAGAATACTGCTTGAAGGTAGTTAGGGATTTGCCTCAATATCAAGCTGTCGCATCAAACACATCTGGTTCCACTCCTAAGGATTTATTTGAGGATGTAGTAGAAGATCTTGAAAATCAGTACCATGAAGACAAGACACTGGTAAAAGATATAATTAAGTCAGGCAAGATCACTGTAGTGTCCACTTCGGTGTTTGAGGAATTCAAGGCTGCTATCTTGGAAGAAGCTAGTTGCGAAACAATATCAGAGATCAATTTGAAGCTTATATTCGAAGACTTGTTAGAGAGAGCTAAAGAGAAAGAGGAGAAAGAAGCTAAGAAGCGCCAGCGCCTTGCTGATGACTTAACTAACCTGTTATATACATTTAAGGATATTACTACTTCTTCAACTTGGGAGGATTGCAAGCCACTTGTTGAGGAGACACAAGAGTACAGATCAATGGGGGATGAAAACTACAGTAGAGAAGTATTTGAGGAGTACATTACATACCTAAAGGAAAAAGCTAAAGAGAAGGAACGCAAGCGTGAAGAGGAAAAGGCCAGAAAGGAGAAAGAGAGAGAAGAGAAAGAGAAACGGAAGGAGAAGGAAAAGGAAAAGAAAGAGAAGGATAGAGAACGCGAGAAAGAAAAGTCTAAAGATCGGCATAAGAAGGACGACACAGATAGTGAAAACCAAGATATTGAAAGCCATGGTTTCAAGGAAGAGAAGAAAAAAGACAAAGATAAGGAAAGGAAACACAGGAAGAGGCGACACAGCAGTGTAGAGGATGTGGATTCCGAGAGGGATGAAAAAGAAGAGTCTAAGAAATCACGAAAGCACGGCAGCGACCGAAAGAAATCTCGAAAGCATGCAAACTCTCCAGAATCAGACAATGAAACCCGGCATAGAAGACACAAGAGGGAGCACCGTGATGGTTCCCGGAAAACCGGGGGCCATGAAGAACTTGAAGACGGGGAACTCGGCGATGATGCAGAGATTTAG 2952 0.4336 MVLLFEQDSVILDVKGILRSQQFFWDYTVKMANNSQPPGMQFRPVIQAQQGQPFAPMASQQFGLAGHAIPSSNVAMPVGQSQQLQYSQPMQQLPPRHIQPGQPAPSSQVIPMQYIQTNRPPTSVPPHSQPTVPHLSSHMPSLAVSAATSHSSYTFQPPYSQQQDNVNAMAQYQQSGQMHAPPAGQPWVSSVSQSAATVTPVQQAGVQSSGTPSTDSATSAPNQQSASDWQEHTAADGRRYYYNKRTRQSSWEKPLELMSPIERADASTVWKEFTSSDGRKYYYNKVTQQSTWSIPEELKLARELALKAANQGMQLETSDTSNTAVSSAAPSTVTNTASSNTPLTSNGLASSPASVTPIASSTGPQQLVSGLSSTTGTELSTVVTASTAVAGPANPLDTTTPSSVENQASQDFAAPTGGASVKDIEETKKGLPVAGKVNVTLPEEKANDKETFAYANKMEAKIAFKALLESANVQSDWTWEQAMREIINDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRMKQKKAREEFTKMLEECKELTSSMRWSKAINMFENDGRNLAEYRKFLESCDYVKVHSPWRKVQDRLEDDDRYLRLEKIDRLLVFQDYIRELEKEEEEQKRVQKERVRRGERKNRDAFRKLLEEHVAAGILNAKTQWREYCLKVVRDLPQYQAVASNTSGSTPKDLFEDVVEDLENQYHEDKTLVKDIIKSGKITVVSTSVFEEFKAAILEEASCETISEINLKLIFEDLLERAKEKEEKEAKKRQRLADDLTNLLYTFKDITTSSTWEDCKPLVEETQEYRSMGDENYSREVFEEYITYLKEKAKEKERKREEEKARKEKEREEKEKRKEKEKEKKEKDREREKEKSKDRHKKDDTDSENQDIESHGFKEEKKKDKDKERKHRKRRHSSVEDVDSERDEKEESKKSRKHGSDRKKSRKHANSPESDNETRHRRHKREHRDGSRKTGGHEELEDGELGDDAEI 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03669 983 MobiDBLite consensus disorder prediction 172 232 - -
Aip06g03669 983 Gene3D FF domain 457 512 IPR036517 -
Aip06g03669 983 PANTHER PRE-MRNA-PROCESSING PROTEIN PRP40 34 559 IPR039726 GO:0045292
Aip06g03669 983 Pfam WW domain 270 295 IPR001202 GO:0005515
Aip06g03669 983 Pfam WW domain 227 254 IPR001202 GO:0005515
Aip06g03669 983 SUPERFAMILY FF domain 624 700 IPR036517 -
Aip06g03669 983 SUPERFAMILY FF domain 516 559 IPR036517 -
Aip06g03669 983 Gene3D FF domain 561 620 IPR036517 -
Aip06g03669 983 MobiDBLite consensus disorder prediction 938 954 - -
Aip06g03669 983 Gene3D FF domain 759 833 IPR036517 -
Aip06g03669 983 SUPERFAMILY FF domain 561 618 IPR036517 -
Aip06g03669 983 CDD WW 270 297 IPR001202 GO:0005515
Aip06g03669 983 MobiDBLite consensus disorder prediction 828 983 - -
Aip06g03669 983 SMART FF_2 457 511 IPR002713 -
Aip06g03669 983 SMART FF_2 631 693 IPR002713 -
Aip06g03669 983 SMART FF_2 765 820 IPR002713 -
Aip06g03669 983 SMART FF_2 557 611 IPR002713 -
Aip06g03669 983 MobiDBLite consensus disorder prediction 172 231 - -
Aip06g03669 983 MobiDBLite consensus disorder prediction 315 373 - -
Aip06g03669 983 SUPERFAMILY FF domain 449 511 IPR036517 -
Aip06g03669 983 Coils Coil 747 775 - -
Aip06g03669 983 Gene3D - 222 265 - -
Aip06g03669 983 Gene3D - 266 307 - -
Aip06g03669 983 ProSiteProfiles WW/rsp5/WWP domain profile. 223 256 IPR001202 GO:0005515
Aip06g03669 983 ProSitePatterns WW/rsp5/WWP domain signature. 270 295 IPR001202 GO:0005515
Aip06g03669 983 Gene3D FF domain 621 704 IPR036517 -
Aip06g03669 983 Gene3D FF domain 513 560 IPR036517 -
Aip06g03669 983 PANTHER PRE-MRNA-PROCESSING PROTEIN 40B 34 559 - -
Aip06g03669 983 SUPERFAMILY FF domain 766 827 IPR036517 -
Aip06g03669 983 PANTHER PRE-MRNA-PROCESSING PROTEIN 40B 559 978 - -
Aip06g03669 983 MobiDBLite consensus disorder prediction 828 898 - -
Aip06g03669 983 CDD WW 227 256 IPR001202 GO:0005515
Aip06g03669 983 SMART ww_5 265 297 IPR001202 GO:0005515
Aip06g03669 983 SMART ww_5 224 256 IPR001202 GO:0005515
Aip06g03669 983 Pfam FF domain 526 559 IPR002713 -
Aip06g03669 983 Pfam FF domain 459 508 IPR002713 -
Aip06g03669 983 Pfam FF domain 560 608 IPR002713 -
Aip06g03669 983 Pfam FF domain 633 689 IPR002713 -
Aip06g03669 983 ProSiteProfiles FF domain profile. 524 611 IPR002713 -
Aip06g03669 983 Coils Coil 505 528 - -
Aip06g03669 983 PANTHER PRE-MRNA-PROCESSING PROTEIN PRP40 559 978 IPR039726 GO:0045292
Aip06g03669 983 Coils Coil 605 625 - -
Aip06g03669 983 ProSiteProfiles FF domain profile. 457 511 IPR002713 -
Aip06g03669 983 MobiDBLite consensus disorder prediction 390 414 - -
Aip06g03669 983 Coils Coil 818 869 - -
Aip06g03669 983 SUPERFAMILY WW domain 228 262 IPR036020 GO:0005515
Aip06g03669 983 ProSiteProfiles FF domain profile. 629 693 IPR002713 -
Aip06g03669 983 MobiDBLite consensus disorder prediction 117 137 - -
Aip06g03669 983 SUPERFAMILY WW domain 257 298 IPR036020 GO:0005515
Aip06g03669 983 ProSiteProfiles WW/rsp5/WWP domain profile. 264 297 IPR001202 GO:0005515
Aip06g03669 983 ProSitePatterns WW/rsp5/WWP domain signature. 229 254 IPR001202 GO:0005515
Aip06g03669 983 MobiDBLite consensus disorder prediction 907 929 - -
Aip06g03669 983 MobiDBLite consensus disorder prediction 390 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03669 Aip-Chr6 134177574 134187360 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03669 K12821 - gmx:100806019 1244.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03669 06 134177574 134187360 Aip06g03669 06 134177574 134187360 ECH