Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03649 ATGGGAAGGGCTCCTTGCTGTGACAAAGCAAATGTGAAGAAAGGGCCATGGTCTCCTGAAGAAGATGCTAAGCTCAAATCATACATACAACAACATGGCACTGGTGGCAATTGGATTGCTTTGCCTCCAAAAATTGGATTGAAGCGTTGTGGGAAGAGTTGCCGTCTAAGGTGGTTGAACTATCTTCGCCCTAATCTCAAGCATGGTGATTTCTCTCAAGAAGAAGACAACATTATTTGTAGCCTCTATGTTAGTATTGGAAGCAGGTGGTCAGTTATTGCTGCTCAATTACCAGGAAGAACTGATAATGACATAAAGAACTATTGGAACACAAGGCTCAAAAAGAAGCTTCTTGGCAATAACAAGAACCGCCGCAACAAAGAACAGCAACAATTACAAGCATGTAGCAATAATAATGGAATCAACAAGCAACAAGAAACATCATCAATTAATGGAGGGAGTGTTATTATTGGTGATGATTCCTTATCTTCCTTATTGGTTCATGAAAATAGTAGTACTACTCATCAACAACAACAACAACAACAACAACAATGTTATTGGCCACACTTCATGCCAGTGTTGCCAATACCAAATTTGCCATATAGCACAACAAATAATAACCAACAATTCTACTTAGGATCTTCTTTCAATGACCAAGATTCCATCAAGAAACTACTTATCAAGCTTGGAGGGAGATTCCATAATGATGTTGATTATCATAATTACCATCCTACCCTTGGTGATGGATTATTGAATCATCTTCATCAATCACAAGGTACTACTACTTATTATTCTAATAATTCAACACAACAACAAGTACTTTATCATCAAGAACAAATACAATTTGATGATGGTAATAATGGACTTCATCATGATGAAATGGTGCAAAGAAAAGGAAACCTCAACAATGAAATTGAAGAAGAAATGGTGGGTAATACTAATTTTATTCCACAAAGATTATTAAATAATGGGTTGGGGTTCTTCCATGGAGACATGGTTTTCAGTGAGGATAAGATCATAATAGGCTCTACTACTACTAGGCCTAATTGGGGTGAGAATAGTAGTGGCAATTCAGTAATTTACCACCCTCTTATTTCTTCTTCAAATTACCAAGAAGATCAAGGTGTAAGGCCATCAGAAGAATGTGCTTTGCAAGAGTATAGCACTATAGCCACCATGAGGACCAATAGTAGCAATAGCATGCTTCATGTACAATAA 1218 0.3711 MGRAPCCDKANVKKGPWSPEEDAKLKSYIQQHGTGGNWIALPPKIGLKRCGKSCRLRWLNYLRPNLKHGDFSQEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNTRLKKKLLGNNKNRRNKEQQQLQACSNNNGINKQQETSSINGGSVIIGDDSLSSLLVHENSSTTHQQQQQQQQQCYWPHFMPVLPIPNLPYSTTNNNQQFYLGSSFNDQDSIKKLLIKLGGRFHNDVDYHNYHPTLGDGLLNHLHQSQGTTTYYSNNSTQQQVLYHQEQIQFDDGNNGLHHDEMVQRKGNLNNEIEEEMVGNTNFIPQRLLNNGLGFFHGDMVFSEDKIIIGSTTTRPNWGENSSGNSVIYHPLISSSNYQEDQGVRPSEECALQEYSTIATMRTNSSNSMLHVQ 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03649 405 CDD SANT 71 113 IPR001005 -
Aip06g03649 405 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Aip06g03649 405 PANTHER OS09G0431300 PROTEIN 1 259 - -
Aip06g03649 405 Gene3D - 7 68 - -
Aip06g03649 405 SMART sant 13 64 IPR001005 -
Aip06g03649 405 SMART sant 67 115 IPR001005 -
Aip06g03649 405 CDD SANT 16 62 IPR001005 -
Aip06g03649 405 PANTHER OS09G0431300 PROTEIN 1 259 - -
Aip06g03649 405 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Aip06g03649 405 MobiDBLite consensus disorder prediction 117 147 - -
Aip06g03649 405 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Aip06g03649 405 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Aip06g03649 405 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Aip06g03649 405 Gene3D - 70 145 - -
Aip06g03649 405 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Aip06g03649 405 MobiDBLite consensus disorder prediction 124 147 - -
Aip06g03649 405 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03649 Aip-Chr6 133923028 133925045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03649 1 228 MYB Transcription Factor Family AT3G49690 56.332 1.70e-79 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aip06g03649 Myb_DNA-binding 2.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03649 K09422 - gmx:100815092 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03649 06 133923028 133925045 Aip06g03649 06 133923028 133925045 ECH
Aip06g03649 06 133923028 133925045 Aip07g03468 07 124561925 124563463 PCT