Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03644 ATGAAGAGTTTGTGTGCTTGCTTCTTCACAAGCAGTGTCTTCAACTCTCACTCCCACTCTCACTGGAACCATAACCATTCTCATTCTCATTCTCAATCTCAGATCATGGCGGGAAGCATCTCTGGTCCGAGTGGGGGCAATGCCGCTAACATTTTACTGAATCATGACTTCTCCGGAGGGTTGGATTCTTGGCATGTCAATTGCTGCGACGGCTATGTAGTTTCAGCTGAAGAAGTTTCCCAATTAGGAATATCAATGGAGACAGATGGTAATTGTGCTGTTATCACCAGCCGAAAAGAATGCTGGCAAGGTCTCGAGCAAGACATCACAAGCAGAGTTTCCATTGGCTCCACTTACATAGTTTCAGCTCTTGTTGGAATATCCGGCCTGTCTCAGGGATCTAATGATGTCCAAGCTACTCTGAAACTTGAATATCACGATTCGGCTACTAGTTACTTGTTCATTGGAAGAACTTCTGTTACAAGGGGAAACTGGAAAAAGCTGGAAGGGACATTTTCATTGTCAACTATGCCAAAACGAGTTGTATTTTATTTGGAAGGACCTGCTCCTGGAGTTGATATACTCATTCGCCCAGTAGAGATCGGCTGTTCAAATCCGAACAACAATATTGCAAGAACTGGATGTGTTTCTACTGGAGAAGATAATATCGTAATAAACCCGCAATTTGATGATGGCTTGAACAATTGGTCCGGAAGAGGCTGTAAGATTGCATTGCATGATTCCATGGGAGATGGGAAAATTCTACCTAAGTCTGGCAAGTTCTTTGCATCAGCGACTGAACTTCGAATATTTGGAAACAATGTCACTACTGCTGATGTTCGCGCTACTTTGTATGTCCAAACATCAGATCTTCGAGACCAGTACATCGGCATTGCCAATGTGCAGGCAACAGACAAAGATTGGATTGATATGCAGGGAAAGTTCCTTCTAAATGGATCCCCATCAAAAGTGGTAATTTATTTAGAGGGTCCTCCGCCGGGTACTGACATTCTTGTTAATAGTTTGGTTGTAAAGCGTGCGCCTAAGACACCTCCATCAACACCACCGGACATAAAGGGTGTTGCTTTTGGGGTTAATGTAATTGAGAACAGCAATCTGGCTGATGGCACTAATGGATGGTATCCCCTTGGTAACTGCACATTGAGTGTTAAAACCGGCTCGCCACATATAATGCCGCCGATGGCAAGAGACTCTCTAGGACCACATGAGCTTCTAAGTGGACGCTACATACTTGTAACAAACCGCACACAAACATGGATGGGTCCTGCTCAGACTATCACTGATAAATTGAAACTCTTTGTGACTTATCAAGTATCGGCTTGGGTTCGGCTTGGTTCAGGATCATCCGGGCCACAGAATGTGAATGTTGCCCTTGGTGTTGACAACCAGTGGGTCAATGGAGGACAAACTGAGGTATCCGATCAAAGATGGCATGAAATCGGTGGGTCGTTTAGAATCGAAAAGCAGCCATCAAAGGTTATGGTTTATGTCCAAGGTCCTGCTTCAGGTGTTGACTTAATGGTTGCTGGACTTCAAATTTTTCCTGTTGATAGACATGCAAGGTTTAAATATCTAAAGTCTCAAACAGACAAGATCCGAAAGCGTGATGTTACCCTGAAATTCTCCGGACTGGATGCAAGCAACTACTCGAAAACCTCAGTGCAAGTCAGACAAATTCAGAATAATTTTCCAGTTGGAACATGCATCAGCAGGATGAACATTGACAATGAGGATTTTGTAGACTTCTTTGTGAAACATTTTAACTGGGCTGTGTTTGGTAATGAGTTGAAATGGTACTGGACCGAGCCGCAACAGGGGAATTTCAACTACAAGGATGCAGATGATCTCTTAAACTTGTGTCAGAAGAACAAGATAGAAACTCGCGGCCATTGTATCTTCTGGGAAGTGGATGGAACCGTCCAGCAATGGATTAAAGCGCTGAACAAAACTGACCTCATGGCGGCCGTCCAGAACAGATTAAACGGCCTGCTTACTCGGTATAAAGGCAAGTTCAATCACTATGATGTTAACAATGAAATGCTGCATGGTTCATTTTACCAGGACAGGTTAGGTAAGGACATAAGGGCCAACATGTTTAAGACTGCGAATCAACTTGATCCGGCCGCTACCCTTTTCGTGAATGATTATCACGTGGAAGATGGATGTGACACCAGATCATGTCCGGAAAAATACATTGAACATATTCTTGATTTGCAAGAACAGGGGTCCCCTGTTGGTGGAATTGGAATTCAAGGCCATATAGATAGTCCGGTTGGGCCTATCGTTTGTTCATCCCTTGATAAACTGGGAATTCTTGGCTTACCTATATGGTTCACCGAGCTAGATGTGTCGTCGACTAACGAATATGTTAGAGCAGACGATTTGGAAGTTATGTTGAGGGAAGCCATGGCTCACCCGGCCGTCGAAGGCCTAATGCTGTGGGGATTTTGGGAGTTGTTCATGAGCCGGGACAACTCTCACTTGGTTAATGCAGAAGGTGAAATCAATGAAGCTGGAAAAAGGTTCCTTGCTCTTAAGCAAGAATGGCTTTCTCATAGCCATGGAAATGTTGATCAGCAAGGTCAATACAACTTTAGAGGCTTTCATGGAACATACAAGGTTGATATTGTCATTGATACAAAGAAAGTTTCCAAGACCTTTGTCCTTGACAAGGGGAACTCACGGCGGGGACAAAAGAGAGCAGTTCGACGGCTGAGTGGAGCGCGCGGGTTGGTCGCAGAGTTTGAAGCAGAGCAACGTGGCTTCCAGACGAACGCGAACTCGAACGGTGAACAGCGAGTGAACGCGAACGGTGAACGCCAAGCGAACGTGAACGACGAAGAACGCGAACGTGAACGGCAAACAAACGGCGACGGAAGCGCGGCTGAGCAGACAAAGACGACGGACGCCGAGCTCGAGGAAGCAGCCGCGATCGGTGAGAGCGAACAGGGGTTGAAGACTTGGAGTACGAGGAAAGCTAGATGA 3006 0.4541 MKSLCACFFTSSVFNSHSHSHWNHNHSHSHSQSQIMAGSISGPSGGNAANILLNHDFSGGLDSWHVNCCDGYVVSAEEVSQLGISMETDGNCAVITSRKECWQGLEQDITSRVSIGSTYIVSALVGISGLSQGSNDVQATLKLEYHDSATSYLFIGRTSVTRGNWKKLEGTFSLSTMPKRVVFYLEGPAPGVDILIRPVEIGCSNPNNNIARTGCVSTGEDNIVINPQFDDGLNNWSGRGCKIALHDSMGDGKILPKSGKFFASATELRIFGNNVTTADVRATLYVQTSDLRDQYIGIANVQATDKDWIDMQGKFLLNGSPSKVVIYLEGPPPGTDILVNSLVVKRAPKTPPSTPPDIKGVAFGVNVIENSNLADGTNGWYPLGNCTLSVKTGSPHIMPPMARDSLGPHELLSGRYILVTNRTQTWMGPAQTITDKLKLFVTYQVSAWVRLGSGSSGPQNVNVALGVDNQWVNGGQTEVSDQRWHEIGGSFRIEKQPSKVMVYVQGPASGVDLMVAGLQIFPVDRHARFKYLKSQTDKIRKRDVTLKFSGLDASNYSKTSVQVRQIQNNFPVGTCISRMNIDNEDFVDFFVKHFNWAVFGNELKWYWTEPQQGNFNYKDADDLLNLCQKNKIETRGHCIFWEVDGTVQQWIKALNKTDLMAAVQNRLNGLLTRYKGKFNHYDVNNEMLHGSFYQDRLGKDIRANMFKTANQLDPAATLFVNDYHVEDGCDTRSCPEKYIEHILDLQEQGSPVGGIGIQGHIDSPVGPIVCSSLDKLGILGLPIWFTELDVSSTNEYVRADDLEVMLREAMAHPAVEGLMLWGFWELFMSRDNSHLVNAEGEINEAGKRFLALKQEWLSHSHGNVDQQGQYNFRGFHGTYKVDIVIDTKKVSKTFVLDKGNSRRGQKRAVRRLSGARGLVAEFEAEQRGFQTNANSNGEQRVNANGERQANVNDEERERERQTNGDGSAAEQTKTTDAELEEAAAIGESEQGLKTWSTRKAR 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03644 1001 SUPERFAMILY (Trans)glycosidases 557 860 IPR017853 -
Aip06g03644 1001 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE PROTEIN 210 267 - -
Aip06g03644 1001 Pfam Carbohydrate binding domain 366 509 IPR003305 GO:0016798
Aip06g03644 1001 Pfam Carbohydrate binding domain 49 190 IPR003305 GO:0016798
Aip06g03644 1001 SUPERFAMILY Galactose-binding domain-like 364 524 IPR008979 -
Aip06g03644 1001 MobiDBLite consensus disorder prediction 929 1001 - -
Aip06g03644 1001 Coils Coil 835 855 - -
Aip06g03644 1001 Pfam Glycosyl hydrolase family 10 566 823 IPR001000 GO:0004553|GO:0005975
Aip06g03644 1001 Gene3D Glycosidases 554 863 - -
Aip06g03644 1001 PANTHER GLYCOSYL HYDROLASE 210 267 IPR044846 GO:0004553|GO:0005975
Aip06g03644 1001 PANTHER GLYCOSYL HYDROLASE 47 199 IPR044846 GO:0004553|GO:0005975
Aip06g03644 1001 PANTHER GLYCOSYL HYDROLASE 268 901 IPR044846 GO:0004553|GO:0005975
Aip06g03644 1001 MobiDBLite consensus disorder prediction 949 964 - -
Aip06g03644 1001 SUPERFAMILY Galactose-binding domain-like 220 348 IPR008979 -
Aip06g03644 1001 SMART glyco_10 603 853 IPR001000 GO:0004553|GO:0005975
Aip06g03644 1001 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE PROTEIN 47 199 - -
Aip06g03644 1001 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE PROTEIN 268 901 - -
Aip06g03644 1001 ProSitePatterns Glycosyl hydrolases family 10 (GH10) active site. 780 790 IPR031158 -
Aip06g03644 1001 MobiDBLite consensus disorder prediction 929 948 - -
Aip06g03644 1001 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 557 852 IPR001000 GO:0004553|GO:0005975
Aip06g03644 1001 SUPERFAMILY Galactose-binding domain-like 49 205 IPR008979 -
Aip06g03644 1001 Gene3D - 264 346 - -
Aip06g03644 1001 Gene3D - 362 521 - -
Aip06g03644 1001 Gene3D - 45 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03644 Aip-Chr6 133801716 133811150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03644 45 903 Glycoside Hydrolase AT1G58370 67.978 0.0 1252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03644 - - gmx:100816678 1537.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03644 06 133801716 133811150 Aip06g03644 06 133801716 133811150 ECH
Aip06g03644 06 133801716 133811150 Aip07g03461 07 124443972 124448276 PCT