Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03638 ATGGATTTCATGAAGGTCTTCGATCAAACCGTTCGAGAAATAAAGAGAGAGGTGAATCTGAAGGTGCTAAAGGTTCCCGAGATCGAACAGAAGGTGTTGGATGCAACTGATAATGAACCTTGGGGTCCTCATGGTTCTGCACTGGCAGAGATTGCACTGGCTACCAAAAAATTTACTGAATGTCAAATGGTCATGAATGTCCTTTGGACAAGATTGGCTGAAACTGGAAAAGATTGGCGCTATGTTTACAAGGCATTAGCTGTTATAGAGTATTTGGTAGCACATGGGTCTGAACGTGCAGTTGATGACATTATAGAGCATACATTTCAAATCTCAGCACTTTCTAGCTTTGAATATGTTGAGCCTAGTGGTAAGGATTCGGGACTAAATGTCAGGAAGAAGGCAGAAACCATTGTGGCCCTTTTAAATAATAGAGAAAAGATACAGGAAGTGAGAAATAAAGCTGCTGCAAACCGTGACAAATACGTCGGAGTTTCTTCTAGTGGAATCACGTACAAGTCTGGGTCAACCTCATTTAGTAGTGGCAGCTATCAGAGCAGTGGTAAATATTCGGGCTTTGGTTCAAATGATGGTGATAGGTTTAGGGATAGCTACAGAGACAAGGGAGACTATGAAGAAGACAAATACACTAGAAGATCACGAAACATCGGTGACGATGAAGAGAACTCCTTCAAAAAGGGTACTGCACACTCTGTCAGCAAAAGTCAGGAGAATGCACCATCCAGAGTATCTAAGTCATCTACTACTAATGCCCAAGATAATTACAGTTCAGTTGCTTCTCAAAGTTCAAGTGCACCTGCAAATAATACCGAGGATGACTTTGACGACTTTGATCCAAGAGGAACTTCTGCTAAGCCTTCGGCTGGAAGCTCTAATCAAGTTGATCTCTTTGGACAAGATTTAATCAGTGACTTCATGGATGCTCCAACATCTGTTTCTACAGAAAAGGCTGCTGCTAATAGTGTTTCAGAGGTTGATCTATTTGCAGATGCTTCATTTGTATCGGCACCACCTAATGTGGACAAGGGAGCTAGTTCTCAACCTCAGGAAGAAGTGGATCTATTTGCATCACAGCCAGCCATTCCTTCAGTTACACCAACAGTTGACTTGTTTTCCATTCCTAAACCAGTTGCACAGCCAGACAAGAAGTCAGGAAATTCTGCTTCAGCGAATAGTAGCACTTTTGATCCCTTTGCTGTTTCTGAACCAGTTGTGCATACAGATGCAGGAAATTCTGCTCCTGTGAATAATAGCACTTTTGATCCCTTTGCCATTCCTGAAGCTCTTTAG 1311 0.4218 MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDNEPWGPHGSALAEIALATKKFTECQMVMNVLWTRLAETGKDWRYVYKALAVIEYLVAHGSERAVDDIIEHTFQISALSSFEYVEPSGKDSGLNVRKKAETIVALLNNREKIQEVRNKAAANRDKYVGVSSSGITYKSGSTSFSSGSYQSSGKYSGFGSNDGDRFRDSYRDKGDYEEDKYTRRSRNIGDDEENSFKKGTAHSVSKSQENAPSRVSKSSTTNAQDNYSSVASQSSSAPANNTEDDFDDFDPRGTSAKPSAGSSNQVDLFGQDLISDFMDAPTSVSTEKAAANSVSEVDLFADASFVSAPPNVDKGASSQPQEEVDLFASQPAIPSVTPTVDLFSIPKPVAQPDKKSGNSASANSSTFDPFAVSEPVVHTDAGNSAPVNNSTFDPFAIPEAL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03638 436 MobiDBLite consensus disorder prediction 235 277 - -
Aip06g03638 436 SUPERFAMILY ENTH/VHS domain 7 152 IPR008942 -
Aip06g03638 436 MobiDBLite consensus disorder prediction 380 402 - -
Aip06g03638 436 PANTHER EPSIN/ENT-RELATED 1 409 - -
Aip06g03638 436 MobiDBLite consensus disorder prediction 176 301 - -
Aip06g03638 436 MobiDBLite consensus disorder prediction 416 436 - -
Aip06g03638 436 MobiDBLite consensus disorder prediction 176 193 - -
Aip06g03638 436 SMART enth_2 26 152 IPR013809 -
Aip06g03638 436 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
Aip06g03638 436 PANTHER CLATHRIN INTERACTOR EPSIN 1 1 409 IPR033521 GO:0006623|GO:0030276
Aip06g03638 436 CDD ENTH 28 144 - -
Aip06g03638 436 Pfam ENTH domain 27 147 IPR013809 -
Aip06g03638 436 MobiDBLite consensus disorder prediction 199 234 - -
Aip06g03638 436 Gene3D - 24 164 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03638 Aip-Chr6 133772564 133777880 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03638 K12471 - gmx:100789110 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03638 06 133772564 133777880 Aip06g03638 06 133772564 133777880 ECH