Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0893 ATGGACAAATTTGAAAAAGAAAATAGAGGCAATGAAGCCATGATTCTGGGAAACCGCAACGAGATAGGGGATGAGATGCAGTCCAGTGATGGGACTTGCCCCTCTCTTGGTCAGATCATGGAGGGAAAACACTCTGTTCCAAGTATGACCAAGCCTACTAATATCATACAAAATCATGACTTCTCTGAAGGGCTAAGCTTTTGGCATCCGAATGGCTGTGACGGCTATGTTGCTTCAACTGAACCAGGTCCTCAAGGAGGAGTGACAATGACATTAGGTGCTAAATATGCTGTTATCACAAACAGAAAGGAATGGTGGCAAGGTCTTGAGCAAGATATCACTGGAAAAATCTCTGTCGCTTCCACTTATGCTGTTTCGGCCAATGTTGGAGTAGCTGCACTTTCTGAGGGATCTGCTGATGTTCTAGCTACCCTGAAACTAGAGTATCATGGTTCTGATGCAAGCTACCTGTTCCTTGGGAGAACTTCTTGTACAAATGGTAGCTGGGAAAATCTGAAAGGGACATTTTCATTGTCAACTATGCCTGATCGAGTTACATTTTATTTGGAAGGACCTGCTCCTGGAGTTGACCTTCTTATACAATCAGTAGAGATTACCTGCTCTAGTTCAAGTGATATTGAGGATCATGCAAAAACAACAGGAACTTTGTCAACTGAAGATGATAACATCATAATAAACCCACAATTTGATGATGGCCAGAATAACTGGTCTGGAAGAGGCTGCAAGATCGCAATACACGACTCACTGGGAAATGGAAAAGTCCTTCCCAAGGTTGGAAAATTCTTTGCAGCTGCAACAGAACGCACCCAAAGCTGGAATGGAATTCAGCAGGACATTACCGGACGGGTGCAGCGCAAGCTCGCCTATGAACTCTCTGCTTTGGTTCGGATATTTGGAGGCAATGTGACTTCTTCTGATGTCCGCGCAACTTTATGGGTTCAGAATCCGGATTCTCGAGAGCAGTATATAGGAATTGCCAATGTGCAGGCAACAAATCAAGATTGGGTTCAATTGCAGGGAAAGTTCCTCATAAATAATTCCCCATCAAAAGTGGTTGTTTATTTAGAAGGTCCCCCAGCAGGCATTGACATTCTTGTCAATACTATTGTTATAAAACATGCTCCCAAGACACCTCCATCAACGCCACCAGATTTTGAGGATGCTCCTTTTGGGATTAATATAATTGAGAATAGTAATCTGGCTAATGGCACCAATGGATGGTTTCCCCTTGGTAATTGTACTCTGAGTGTTGGAACCGGTTCGCCACGTGTGCTTCCACCAATGGCAAGAGACTCTCTTGGACCTCACGAATCATTGAGCGGCCGCTATGTCCTTGTAACGAACCGCACCCAAACATGGATGGGGCCTGCGCAGATGATCACTGAGAAATTGAAGCTGTTCTTAACATACCAAGTGTCTGCTTGGGTGAGGATTGGTTCAACAGGATCAGTTGGTCCTCAGAATGTGAATGTTGCCCTTAGTGTTGACGATCAGTGGGTGAATGGCGGACAGGTTGAGGTTGCTGATGACAGATGGCATGAAATTGGTGGATCATTTAGAATTGAGAAGCAACCATCAAAGGTTATGGTTTATATTCAAGGTCCTGCTTCTGGTGTTGATTTGATGATTGCTGGACTTCAAATCTTCCCTGTTGATAGACAAGCAAGGTTTAGATATTTAAGGAGGCAGACAGACAAGGTTCGAAAGCGCGATGTAATCTTGAAATTCTCTGGGCTGGAGGACATAAGTGGTCTAGGAACTTTGGTTAAAGTGAGGCAAATACAGAACGATTTTCCAATTGGAACATGCATCAACAGAACAAACATTGACAATGAAGACTTTGTTGACTTCTTTGTGAAGCATTTTAACTGGGCTGTGTTTGGGAATGAGTTGAAGTGGTATTGGACAGAACCACAACAGGGGAATATCAACTACAAAGATGCTGATGAAATGTTAGACTTATGCCTCAAGAACAAGATAGAAACCCGCAGCCACTGCATCTTCTGGGAAGTAGAAGGCACAGTTCAGCAGTGGATCAAATCACTGAACAAAGACGATTTGATGAAAGCGGTCCAAAATCGGTTAAGCAGCCTCTTGAATCGGTACAAGGGGAAGTTCAGGCACTATGATGTTAACAATGAAATGCTGCATGGTTCATTTTATCAAGACAGGCTTGGTAGAGACATAAGAGCAAACATGTTCAAGACAGCACACCAATTAGACCCATCTGCTACTCTCTTTGTGAATGATTATCACATTGAAGATGGAAACGACACAAGATCAACACCAGAGAAATACATTCAACAGATTCTTGATTTGCAACATCAAGGTGCACCAGTTGGTGGAATTGGAATTCAAGGACACATAGATAGTCCTGTGGGGCCTATTGTTTGTTCTGCACTTGATAAATTAGGGACTCTTGGTTTACCAATATGGTTCACTGAGCTTGATGTTTCTTCAAGAAATGAGTATGTTAGAGCTGATGATTTGGAAGTTATGATGAGGGAAGCCATGGCACACCCTTCAGTAGATGGCATAATGCTGTGGGGATTCTGGGAATTGTTTATGAGCAGGGAGAATTCACACTTGGTGAATGCAGAAGGTGATGTTAATGAAGCTGGAAAAAGGTTACTTTGTCTTAAACAAGAGTGGTTGTCTCATAGCCATGGCTGTGTTGATGATCAAGGACTATTCAGCTTCAGAGGCTTCAGTGGAACATACAATGTTGAAGTTGTAACCTTATCTAAGATTGTTTCAAAGACATTTGTTGTTGGTAAAGGTGACTCTCCTTTGGAGGTAGAGGTATCCTTTGACTAG 2838 0.4288 MDKFEKENRGNEAMILGNRNEIGDEMQSSDGTCPSLGQIMEGKHSVPSMTKPTNIIQNHDFSEGLSFWHPNGCDGYVASTEPGPQGGVTMTLGAKYAVITNRKEWWQGLEQDITGKISVASTYAVSANVGVAALSEGSADVLATLKLEYHGSDASYLFLGRTSCTNGSWENLKGTFSLSTMPDRVTFYLEGPAPGVDLLIQSVEITCSSSSDIEDHAKTTGTLSTEDDNIIINPQFDDGQNNWSGRGCKIAIHDSLGNGKVLPKVGKFFAAATERTQSWNGIQQDITGRVQRKLAYELSALVRIFGGNVTSSDVRATLWVQNPDSREQYIGIANVQATNQDWVQLQGKFLINNSPSKVVVYLEGPPAGIDILVNTIVIKHAPKTPPSTPPDFEDAPFGINIIENSNLANGTNGWFPLGNCTLSVGTGSPRVLPPMARDSLGPHESLSGRYVLVTNRTQTWMGPAQMITEKLKLFLTYQVSAWVRIGSTGSVGPQNVNVALSVDDQWVNGGQVEVADDRWHEIGGSFRIEKQPSKVMVYIQGPASGVDLMIAGLQIFPVDRQARFRYLRRQTDKVRKRDVILKFSGLEDISGLGTLVKVRQIQNDFPIGTCINRTNIDNEDFVDFFVKHFNWAVFGNELKWYWTEPQQGNINYKDADEMLDLCLKNKIETRSHCIFWEVEGTVQQWIKSLNKDDLMKAVQNRLSSLLNRYKGKFRHYDVNNEMLHGSFYQDRLGRDIRANMFKTAHQLDPSATLFVNDYHIEDGNDTRSTPEKYIQQILDLQHQGAPVGGIGIQGHIDSPVGPIVCSALDKLGTLGLPIWFTELDVSSRNEYVRADDLEVMMREAMAHPSVDGIMLWGFWELFMSRENSHLVNAEGDVNEAGKRLLCLKQEWLSHSHGCVDDQGLFSFRGFSGTYNVEVVTLSKIVSKTFVVGKGDSPLEVEVSFD* 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0893 945 Gene3D - 397 556 - -
Ahy8g0893 945 Gene3D - 48 207 - -
Ahy8g0893 945 Gene3D - 223 380 - -
Ahy8g0893 945 PANTHER GLYCOSYL HYDROLASE 49 206 IPR044846 GO:0004553|GO:0005975
Ahy8g0893 945 PANTHER GLYCOSYL HYDROLASE 217 942 IPR044846 GO:0004553|GO:0005975
Ahy8g0893 945 Pfam Carbohydrate binding domain 54 194 IPR003305 GO:0016798
Ahy8g0893 945 Pfam Carbohydrate binding domain 400 544 IPR003305 GO:0016798
Ahy8g0893 945 Pfam Carbohydrate binding domain 228 365 IPR003305 GO:0016798
Ahy8g0893 945 SUPERFAMILY Galactose-binding domain-like 227 383 IPR008979 -
Ahy8g0893 945 Coils Coil 870 890 - -
Ahy8g0893 945 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE PROTEIN 217 942 - -
Ahy8g0893 945 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 592 887 IPR001000 GO:0004553|GO:0005975
Ahy8g0893 945 ProSitePatterns Glycosyl hydrolases family 10 (GH10) active site. 815 825 IPR031158 -
Ahy8g0893 945 Pfam Glycosyl hydrolase family 10 601 858 IPR001000 GO:0004553|GO:0005975
Ahy8g0893 945 SMART glyco_10 638 888 IPR001000 GO:0004553|GO:0005975
Ahy8g0893 945 SUPERFAMILY (Trans)glycosidases 596 895 IPR017853 -
Ahy8g0893 945 SUPERFAMILY Galactose-binding domain-like 52 208 IPR008979 -
Ahy8g0893 945 Gene3D Glycosidases 592 895 - -
Ahy8g0893 945 SUPERFAMILY Galactose-binding domain-like 398 559 IPR008979 -
Ahy8g0893 945 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE PROTEIN 49 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0893 Ahy-Chr8 17254573 17265356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0893 53 944 Glycoside Hydrolase AT1G58370 66.704 0.0 1267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0893 - - lja:Lj0g3v0316669.1 1456.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3184 17 133696011 133706381 Ahy8g0893 8 17254573 17265356 hybridization
Ahy16g3392 16 150874061 150879457 Ahy8g0893 8 17254573 17265356 PCT
Ahy6g2655 6 111862672 111868134 Ahy8g0893 8 17254573 17265356 PCT
Ahy8g0893 8 17254573 17265356 Ahy16g3392 16 150874061 150879457 PCT
Ahy8g0893 8 17254573 17265356 Ahy6g2655 6 111862672 111868134 PCT