Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2816 ATGATATATAATGCTGCAATTCTTGTCAAGTTTCATTCTTCACCTGGAGGATCATTGGAAAAGAGAAAAAGGGAGGTGGGGATGCAGGGAAATTTGAGAAATGCAGCAACAACAAAAGGTGGAAGAAAATCCATAAGCAGAGAAAGAAAACTAGCATTGCAACAAGATGTAGATAGTTTGAAGAAGAAGCTAAGGAATGAAGAGAACATTCATAGGGCATTGGAAAGAGCTTTTAATAGACCTTTGGGAGCATTGCCTAGGCTTCCTCCTTATCTCCCTCCATATATACTGGCGCTTCTCGCGGAAGTAGCAGTTTTGGAAGAGGAGATTGTTAGCCTTGAAAAGCAGGTTGTGCATTTCAGGCAAGACTTGTACCAAGAAGCTGTTTACATGTCTTCTTCTAAGAGGAAAATGGAGCATTCAGCTCATTCAAACAATCCAAATCCAACAATGGATACTCCAAAATTGGATACATTGAAGCATTTTTCACAGAAATCTGGTAATCCAGCAACATCTGCAACTGTTCCAGAGGATAGAAAAGGAAAAGAGAATCAGTCATGTACCAATTCTTCCAAGAGTAGGAAGCAATCTTCAAACCAAACAAATAAAACTCCAATCAAGAAACTTTCCATTGACAATAAATCACTACAAAAAAGTTTGGATACTCCAAGAAGGCAGCAAGAAACAAGGGTAAATGACCAACAAATTGCAGAACTAAGAAATCCTAGTCAACACAAAAGGCCACTACCAGAATCTGATAGCCCAAATATAATCTCTGAGAATATTCTGAAGTGTTTATCAAGCATTCTCTTGAGAATGAGTGCTGTGAAGAATCCATGCTCTGTAGGTAACACACTAACGCGCCAAAACTGTATCGAAGGGACTGAAGTTTGGGATCCATATGGTGTCTGTTTGGAATTTGGACAGCATGATATCGGTCCATACAAGCAGTTATGTGCAGTTGATGCGAAATCTTTCAATCCAAATCGAACAGCAAACACTTTGTTTTTACAACATAGATTGAAACTTTTATTTAGGAAACTTGCCTCTGTCAACTTAGAGAAACTTAACCATCAAGAGAAGCTTGCATTCTGGATCAACATTTATAACTCCTGTATGATGAATGCATTCATAGAGGGTGGCACACCAGAGAGTCCAGAAGCGGTTGTTACATTGATGCAGAAGGCAACAATCAATGTTGGTGGGCACATGCTGAATCCAACAACCATAGAGCATTTCATTTTAAGACTTCCTTACCATTGGAAATTTACGTTCTCAAAGGGAGCGAAAAATCACGAAATGACAGCAAGAAGCATGTTTGGACTGGAATTGTCAGAACCCTTGGTGACATTTGCTCTCTCTTGTGGTACCTTGTCCTCTCCTGCTGTGAGAGTTTACACAGCATCCCAAGTTGAGAACCAGCTAGAAGTGGCTAAAAGAGAGTATTTGCAAGCAACTTTTGGAATCTCAACAACCAAATTTGCTATCCCAAAGTTGCTTGATTGGTATTTACTTGATTTTGCAAAGGACTTGGAATCATTATTGGATTGGATATGTCTCCAATTACCAAGTGAATTGGGGAAAGAAGCAATCAAATTACTTGAGGAAAGAAAAACTGAACCTCTCTCTCAATTTGTACAAATTATGCCATACGAGTTCAGTTTTAGATACTTGCTATGCACATAG 1686 0.3903 MIYNAAILVKFHSSPGGSLEKRKREVGMQGNLRNAATTKGGRKSISRERKLALQQDVDSLKKKLRNEENIHRALERAFNRPLGALPRLPPYLPPYILALLAEVAVLEEEIVSLEKQVVHFRQDLYQEAVYMSSSKRKMEHSAHSNNPNPTMDTPKLDTLKHFSQKSGNPATSATVPEDRKGKENQSCTNSSKSRKQSSNQTNKTPIKKLSIDNKSLQKSLDTPRRQQETRVNDQQIAELRNPSQHKRPLPESDSPNIISENILKCLSSILLRMSAVKNPCSVGNTLTRQNCIEGTEVWDPYGVCLEFGQHDIGPYKQLCAVDAKSFNPNRTANTLFLQHRLKLLFRKLASVNLEKLNHQEKLAFWINIYNSCMMNAFIEGGTPESPEAVVTLMQKATINVGGHMLNPTTIEHFILRLPYHWKFTFSKGAKNHEMTARSMFGLELSEPLVTFALSCGTLSSPAVRVYTASQVENQLEVAKREYLQATFGISTTKFAIPKLLDWYLLDFAKDLESLLDWICLQLPSELGKEAIKLLEERKTEPLSQFVQIMPYEFSFRYLLCT* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2816 561 PANTHER EXPRESSED PROTEIN 27 560 - -
Ahy6g2816 561 Coils Coil 96 123 - -
Ahy6g2816 561 PANTHER TRANSCRIPTION FACTOR 27 560 - -
Ahy6g2816 561 MobiDBLite consensus disorder prediction 135 255 - -
Ahy6g2816 561 Coils Coil 50 77 - -
Ahy6g2816 561 Pfam Protein of unknown function, DUF547 354 483 IPR006869 -
Ahy6g2816 561 Pfam Leucine-zipper of ternary complex factor MIP1 47 127 IPR025757 -
Ahy6g2816 561 MobiDBLite consensus disorder prediction 186 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2816 Ahy-Chr6 114027712 114031809 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3569 16 153331717 153335814 Ahy6g2816 6 114027712 114031809 hybridization
Ahy6g2816 6 114027712 114031809 Ahy17g2490 17 118916550 118919966 PCT
Ahy6g2816 6 114027712 114031809 Ahy8g0289 8 5953186 5956553 PCT
Ahy17g2490 17 118916550 118919966 Ahy6g2816 6 114027712 114031809 PCT
Ahy8g0289 8 5953186 5956553 Ahy6g2816 6 114027712 114031809 PCT