Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2687 ATGGGCGAAATCTACAAAATCAACTCAATAGATTGGAGACCCTCTCCGGTAGTCGCTCTTGCCACCAGCGTCGACGGCCTCCGTGTAGCCGCAGCTCGCCAAGACGGTTCCCTTGAACTCTGGCTCGTATCTCCCGGCTCCATTGGCTGGCACTGTCAACTTACGATTCATGGTGACCCTACTACAAGAGTATCTTCGCTTCTTTGGTGCCCTGGCGGCTCCAATGGCATGCCGTGCGGTCGTTTGTTTTCGTCTAACATTGATGGTTCAGTTTCCAAGTGGGATCTTTTCCACCTGAAGCAAACGACTGTGCTTGATTCAGATGGTGTTTCCATTTGGCAAATGGCTGTTACGTTCCCTAAGGTTGATTTAGTTAATAATGTGCCTAATGGTGATGTTATGGGGAATGGTTATGCCAGTAAAATTCAAGAATCTGATGAACAAGAGAGCAGCGATAGTGACGAAGATAATGACTCACCTGATGCTGGCAAGCAATCTGTTCTTGAGTCTCCACGTGTAGCAATTGGTTATGATGATGGAAGTGTGAGGATTTATGCCATATCTGACGAAGATGAATTCCTATATGTAAAATCATTGCCTCGGGTCAAAGGACGAGTTTTAAGTGTGACTTGGAGCACTGATGCTAACTACATATACTCCGGAAGTAGTGATGGGTTAATACGGTGCTGGGATGCTACGTCTAGTCGTGAAATTTATAGGATTACGGCTGGGCTTGGAGGTTTGGGTGGCGGACATGAACTTTGCATATGGTCGTTACTGTCTTTAAGGTCTGGGACGCTTGTTAGTGCAGACAGCAGTGGCAGTGTCCAATTTTGGGATAGTAAACATGGAACTCTCTTGCAAGCACATTCATTGCACAAGGGCGATGTAAATGCTTTGGCTGCATCCCCAAGTCATGATAGGGTGTTCTCGGCTGGTTCTGATGGCCAGGTTATTCTCTATAAGCTGTCTAGCCAGTCAGCATCTTCCGACAGTGTCAACCCCCTTGTGATGACAAAGAAATGGATCTATGTTCACTATGTAAGGTCTCATACACATGATGTCAAGGCCTTGACTGTTGCTGTGCCGATATCTCAAGAAGCAGATTCTCTGCCAGAAGAGAGGAATAAAAGACGTCGGCTTGAAGGAAAGCCTGTTGATTTAAATTATCATAAATGGTCCCAATTTGGGGTTCCCATGCTTATATCAGCAGGAGATGACACAAAACTATTTGCATACCCGGTAAAGGAATTCACTAAGTTTTCTCCTCATGATATTTGTCCTGCGCCTCAGAGAACCCCGGTTCAGCTAGTGCTTAATACTGCCTTCAATCAATCATCAATGCTTTTAGTCCAGTCTAGGCAATGGTTAGATGTACATTTACTACATCTTGGAAATGTTCGTACAGCTGGATGCTTTACTAAGACTGAAATCCTTGCACGAGTGAAGACTAAGGAATCTCGGAAGATTGCTTGCAGCACAATTGCTAATTCTGGGGAGCATTTTGCGTACTCAGATAATGCAAGGCCTAGTCTGTTTGAGTTAAAGAGGAGTGAAGTTGGAAAGATTACATGGAGCGTGAGTAGAAAGAAGCTTCCCTCGAGGTTACCCTTTGCCCATTCAATGATTTTCACCCATGAGTCATCCTGGTTGATACTAGCTGGCCATGATAGGAGGATATATGTTGTGGATGTCAGCACATCGGAACTAGTGCATGCTTTTACACCCTGTCGGGAGCTGGATGACGAGAAATTGCCTCCGAAGGAACCTCCCATTACTAGATTATTTACCAGTTCCGACAGGCAGTGGCTGGCAGCTGTTAACTGCTTTGGCGATATATATGTGTTTAACTTGGAGACACTAAGGCAGCACTGGTTCATCTCAAGATTAGATGGTGCCTCTGTTACGGCTGGTGGGTTTCCTCCCCAGAACAACAATGTAATGATAGTTACAACTTCTTCGAATCAAGTGTATGCATTTGACGTTGAGGCCAAGCAGTTGGGAGAATGGTCGATGAGGAATACATATGTTCTTCCCCGGAGATTCCAGGAGTTTCCCGGTGAAGTCATTGGGCTTTCATTTCCTCCCTCATCAACTTCATCATCAGTTGTTATTTATAGCTCCAGGGCAATGTGCTTGATTGATTTTGGATTACCGGTGGAGCAAGACGAAAGCGATATGCTAAATGCTCAAGAATCATTGACCAGGAACTTGCAACAAAACTTTACTAATGTTAAGAAGAGGACAAAATATAGGAGAAACTTTGACGTATTTTCATTAGATAACCCAGTTTTATTTTTAGCTCATGTCTCAAAAAATTCCTTCTTTATGGTAGAAAAGCCATGGCTGGAAGTGGTTAAAAGACTAGAAGCCCCACCAGTTCATAAACATATTTTTGGCACCTAA 2406 0.4422 MGEIYKINSIDWRPSPVVALATSVDGLRVAAARQDGSLELWLVSPGSIGWHCQLTIHGDPTTRVSSLLWCPGGSNGMPCGRLFSSNIDGSVSKWDLFHLKQTTVLDSDGVSIWQMAVTFPKVDLVNNVPNGDVMGNGYASKIQESDEQESSDSDEDNDSPDAGKQSVLESPRVAIGYDDGSVRIYAISDEDEFLYVKSLPRVKGRVLSVTWSTDANYIYSGSSDGLIRCWDATSSREIYRITAGLGGLGGGHELCIWSLLSLRSGTLVSADSSGSVQFWDSKHGTLLQAHSLHKGDVNALAASPSHDRVFSAGSDGQVILYKLSSQSASSDSVNPLVMTKKWIYVHYVRSHTHDVKALTVAVPISQEADSLPEERNKRRRLEGKPVDLNYHKWSQFGVPMLISAGDDTKLFAYPVKEFTKFSPHDICPAPQRTPVQLVLNTAFNQSSMLLVQSRQWLDVHLLHLGNVRTAGCFTKTEILARVKTKESRKIACSTIANSGEHFAYSDNARPSLFELKRSEVGKITWSVSRKKLPSRLPFAHSMIFTHESSWLILAGHDRRIYVVDVSTSELVHAFTPCRELDDEKLPPKEPPITRLFTSSDRQWLAAVNCFGDIYVFNLETLRQHWFISRLDGASVTAGGFPPQNNNVMIVTTSSNQVYAFDVEAKQLGEWSMRNTYVLPRRFQEFPGEVIGLSFPPSSTSSSVVIYSSRAMCLIDFGLPVEQDESDMLNAQESLTRNLQQNFTNVKKRTKYRRNFDVFSLDNPVLFLAHVSKNSFFMVEKPWLEVVKRLEAPPVHKHIFGT* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2687 801 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 801 IPR044622 GO:0010073|GO:0035266
Ahy6g2687 801 ProSiteProfiles Trp-Asp (WD) repeats profile. 290 331 IPR001680 GO:0005515
Ahy6g2687 801 SMART WD40_4 283 322 IPR001680 GO:0005515
Ahy6g2687 801 SMART WD40_4 192 231 IPR001680 GO:0005515
Ahy6g2687 801 SMART WD40_4 49 95 IPR001680 GO:0005515
Ahy6g2687 801 SMART WD40_4 529 564 IPR001680 GO:0005515
Ahy6g2687 801 SMART WD40_4 3 42 IPR001680 GO:0005515
Ahy6g2687 801 SMART WD40_4 234 280 IPR001680 GO:0005515
Ahy6g2687 801 Gene3D - 5 126 IPR015943 GO:0005515
Ahy6g2687 801 ProSiteProfiles Trp-Asp (WD) repeats profile. 199 240 IPR001680 GO:0005515
Ahy6g2687 801 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 199 236 - -
Ahy6g2687 801 MobiDBLite consensus disorder prediction 143 165 - -
Ahy6g2687 801 Gene3D - 523 717 IPR015943 GO:0005515
Ahy6g2687 801 SUPERFAMILY WD40 repeat-like 264 699 IPR036322 GO:0005515
Ahy6g2687 801 SUPERFAMILY WD40 repeat-like 7 326 IPR036322 GO:0005515
Ahy6g2687 801 Pfam WD domain, G-beta repeat 206 231 IPR001680 GO:0005515
Ahy6g2687 801 Pfam WD domain, G-beta repeat 293 321 IPR001680 GO:0005515
Ahy6g2687 801 Gene3D - 127 470 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2687 Ahy-Chr6 112373165 112378531 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2687 K14548 - gmx:100797494 1142.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3424 16 151455377 151461497 Ahy6g2687 6 112373165 112378531 hybridization