Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy6g2678 | ATGTTGGACTACCTACAACTCATTCACCCTCAAACGCGCAGAGAGAGAAAGAGAGTGAAAGAGGACCCTAATTCCGCAAACAGAACGAGAAGATTCTCTCTCGCAGTCCCAGCAATTCTTCTGGTAACGCAATCAAACCAATCGGATTATACTGTTAAAATGGCCAATAATTCTCAGCCCCCTAGTATGCAGTTTCGGCCAGTCATTCAGGCCCAGCAAGGTCAGCCATTTGCTCCAATGGCTTCCCAACAATTTGGACTTGCAGGACATGCTATTCCTTCTTCAAATGTTGCAATGCCTGTTGGTCAGAGTCAGCAATTACAGTATTCACAACCAATGCAGCAGTTGCCTCCAAGACATATTCAGCCTGGTCAACCTGCACCTTCGTCGCAGGTTATACCTATGCAATATATCCAAACAAATAGGCCCCCGACATCCGTCCCACCACATTCACAGCCAACTGTTCCCCACTTAAGCAGTCATATGCCCAGCTTGGCTGTTTCAGCAGCAACTTCTCATTCTTCATATACTTTTCAACCACCGTATAGTCAGCAGCAGGATAATGTTAATGCAATGGCTCAGTACCAGCCATCGGGCCAAATGCATGCTCCTCCGGCTGGACAACCTTGGGTGTCCTCTGTTTCTCAGAGTGCTGCAACTGTTACACCAGTGCAACAGGCTGGAGTGCAATCATCTGGTACTCCGTCAACTGATTCTGCAACAAGTGCCCCTAACCAGCAGTCAGCATCTGATTGGCAAGAGCATACTGCAGCTGATGGCAGAAGATATTACTACAACAAGAGGACAAGGCAATCTAGTTGGGAGAAACCATTGGAACTGATGTCACCTATTGAGAGGGCCGATGCATCAACTGTTTGGAAAGAATTCACATCTTCAGATGGAAGAAAGTATTATTACAACAAGGTTACTCAGCAATCAACATGGTCAATACCAGAGGAACTTAAGTTAGCTCGTGAATTGGCACTGAAAGCTGCCAACCAGGGAATGCAATTAGAAACAAGTGATACATCCAATACTGCTGTTTCATCTGCTGCACCATCAACAGTGACTAATACTGCTAGCTCAAACACTCCTTTGACATCAAATGGGCTTGCTTCAAGTCCAGCTTCTGTCACACCAATTGCATCATCAACTGGTCCTCAGCAGTTGGTTTCTGGATTATCAAGTACCACTGGGACTGAACTGAGTACTGTGGTAACTGCGTCTACGGCAGTAGCTGGACCTGCAAATCCTCTTGACACCACTACACCGTCTAGTGTTGAAAATCAAGCATCTCAGGATTTTGCTGCATCTACCGGTGGAGCTTCTGTTCAAGATATAGAGGAAACCAAAAAAGGAGTGCCAGTTGCTGGAAAAGCTAATGTGACTCTGCCGGAGGAGAAAGCAAATGATAAAGAAACCTTTGCATATGCAAATAAGATGGAAGCAAAAATTGCATTTAAGGCACTATTGGAGTCTGCTAATGTTCAGTCTGATTGGACATGGGAACAGGCGATGAGAGAAATAATCAATGACAAAAGATACAATGCTCTAAAAACACTTGGTGAGCGGAAACAAGCTTTTAATGAGTATTTGGGCCAAAGGAAGAAGCTAGAGGCTGAAGAGAGACGCATGAAGCAGAAAAAAGCTCGAGAAGAATTCACAAAGATGTTGGAAGAGTGCAAGGAGCTAACTTCATCCATGAGATGGAGCAAAGCAATCAATATGTTTGAAAATGATGAGCGGTTCAATGCTGTTGACAAAATGAGGGACAGGGAAGATTTATTTGAGAGCTACATGGTGGAACTCGAGAGAAAGGAAAAGGAAAATGCTGCTGAGGAACACAGACGGAATTTAGCAGAATACAGGAAATTCTTGGAGTCATGTGATTATGTGAAGGTTCACAGTCCATGGCGAAAAGTCCAAGATCGGTTAGAGGACGATGATAGATATTTACGGCTTGAAAAAATTGACCGCTTGCTTGTTTTCCAGGACTATATTCGTGAATTGGAAAAAGAAGAAGAGGAGCAAAAACGAGTACAGAAGGAGCGAGTTCGTCGTGGTGAAAGGAAAAATCGTGATGCATTCCGCAAGTTGTTGGAAGAACATGTTGCTGCTGGAATTCTTAATGCTAAAACTCAATGGAGAGAATACTGCTTGAAGGTTAGGGATTTGCCTCAATATCAAGCTGTCGCATCGAACACATCTGGTTCCACTCCTAAGGATTTGTTTGAGGATGTAGTAGAAGATCTTGAAAATCAGTACCATGAAGACAAGACACTGATAAAAGATATAATTAAGTCAGGCAAGATCACTGTAGTGTCCACTTCGGTGTTTGAGGAATTCAAGGCTGCTATCTTGGAAGAAGCTAGTTGCGAAACAATATCAGAGATCAATTTGAAGCTTATATTCGAAGACTTGTTAGAGAGAGCTAAAGAGAAAGAGGAGAAAGAAGCTAAGAAGCGCCAACGCCTTGCTGATGACTTAACTAACCTGTTATATACATTCAAGGATATTACTACATCTTCAACTTGGGAGGATTGCAAGCCACTTGTTGAGGAGACACAAGAGTACAGATCAATGGGGGATGAAAACTACAGTAGAGAAGTATTTGAGGAGTACATTACATACCTAAAGGAAAAAGCTAAAGAGAAGGAACGCAAGCGTGAAGAGGAAAAGGCCAGAAAGGAGAAAGAGAGAGAAGAGAAAGAGAAACGGAAGGAGAAGGAAAAGGAAAAAAAAGAGAAGGATAGAGAACGCGAGAAAGAAAAGTCTAAAGATCGGCATAAGAAGGACGACACAGATAGTGAAAACCAAGATATTGAAAGCCATGGTTTCAAGGAAGAGAAGAAAAAAGACAAAGATAAGGAAAGGAAACACAGGAAGAGGCGACACAGCAGTGTAGAGGATGTGGATTCCGAGAGGGATGAAAAAGAAGAGTCTAAGAAATCACGAAAGCACGGCAGCGATCGAAAGAAATCTCGAAAGCATGCAAACTCTCCAGAATCAGACAATGAAACCCGGCATAGAAGACACAAGAGGGAGCACCGTGATGGTTCCCGGAAAACCGGGGGCCATGAAGAACTTGAAGACGGGGAACTCGGTGATGATGCAGAGATTTAG | 3123 | 0.4345 | MLDYLQLIHPQTRRERKRVKEDPNSANRTRRFSLAVPAILLVTQSNQSDYTVKMANNSQPPSMQFRPVIQAQQGQPFAPMASQQFGLAGHAIPSSNVAMPVGQSQQLQYSQPMQQLPPRHIQPGQPAPSSQVIPMQYIQTNRPPTSVPPHSQPTVPHLSSHMPSLAVSAATSHSSYTFQPPYSQQQDNVNAMAQYQPSGQMHAPPAGQPWVSSVSQSAATVTPVQQAGVQSSGTPSTDSATSAPNQQSASDWQEHTAADGRRYYYNKRTRQSSWEKPLELMSPIERADASTVWKEFTSSDGRKYYYNKVTQQSTWSIPEELKLARELALKAANQGMQLETSDTSNTAVSSAAPSTVTNTASSNTPLTSNGLASSPASVTPIASSTGPQQLVSGLSSTTGTELSTVVTASTAVAGPANPLDTTTPSSVENQASQDFAASTGGASVQDIEETKKGVPVAGKANVTLPEEKANDKETFAYANKMEAKIAFKALLESANVQSDWTWEQAMREIINDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRMKQKKAREEFTKMLEECKELTSSMRWSKAINMFENDERFNAVDKMRDREDLFESYMVELERKEKENAAEEHRRNLAEYRKFLESCDYVKVHSPWRKVQDRLEDDDRYLRLEKIDRLLVFQDYIRELEKEEEEQKRVQKERVRRGERKNRDAFRKLLEEHVAAGILNAKTQWREYCLKVRDLPQYQAVASNTSGSTPKDLFEDVVEDLENQYHEDKTLIKDIIKSGKITVVSTSVFEEFKAAILEEASCETISEINLKLIFEDLLERAKEKEEKEAKKRQRLADDLTNLLYTFKDITTSSTWEDCKPLVEETQEYRSMGDENYSREVFEEYITYLKEKAKEKERKREEEKARKEKEREEKEKRKEKEKEKKEKDREREKEKSKDRHKKDDTDSENQDIESHGFKEEKKKDKDKERKHRKRRHSSVEDVDSERDEKEESKKSRKHGSDRKKSRKHANSPESDNETRHRRHKREHRDGSRKTGGHEELEDGELGDDAEI* | 1041 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy6g2678 | 1040 | MobiDBLite | consensus disorder prediction | 197 | 255 | - | - | |
| Ahy6g2678 | 1040 | ProSiteProfiles | FF domain profile. | 547 | 602 | IPR002713 | - | |
| Ahy6g2678 | 1040 | SUPERFAMILY | FF domain | 472 | 534 | IPR036517 | - | |
| Ahy6g2678 | 1040 | PANTHER | PRE-MRNA-PROCESSING PROTEIN PRP40 | 55 | 1035 | IPR039726 | GO:0045292 | |
| Ahy6g2678 | 1040 | MobiDBLite | consensus disorder prediction | 885 | 1040 | - | - | |
| Ahy6g2678 | 1040 | MobiDBLite | consensus disorder prediction | 209 | 254 | - | - | |
| Ahy6g2678 | 1040 | CDD | WW | 250 | 279 | IPR001202 | GO:0005515 | |
| Ahy6g2678 | 1040 | ProSiteProfiles | WW/rsp5/WWP domain profile. | 287 | 320 | IPR001202 | GO:0005515 | |
| Ahy6g2678 | 1040 | Gene3D | FF domain | 480 | 535 | IPR036517 | - | |
| Ahy6g2678 | 1040 | MobiDBLite | consensus disorder prediction | 338 | 396 | - | - | |
| Ahy6g2678 | 1040 | MobiDBLite | consensus disorder prediction | 964 | 986 | - | - | |
| Ahy6g2678 | 1040 | MobiDBLite | consensus disorder prediction | 995 | 1011 | - | - | |
| Ahy6g2678 | 1040 | ProSiteProfiles | FF domain profile. | 480 | 534 | IPR002713 | - | |
| Ahy6g2678 | 1040 | SUPERFAMILY | FF domain | 541 | 609 | IPR036517 | - | |
| Ahy6g2678 | 1040 | ProSitePatterns | WW/rsp5/WWP domain signature. | 293 | 318 | IPR001202 | GO:0005515 | |
| Ahy6g2678 | 1040 | ProSiteProfiles | WW/rsp5/WWP domain profile. | 246 | 279 | IPR001202 | GO:0005515 | |
| Ahy6g2678 | 1040 | SUPERFAMILY | FF domain | 823 | 884 | IPR036517 | - | |
| Ahy6g2678 | 1040 | ProSitePatterns | WW/rsp5/WWP domain signature. | 252 | 277 | IPR001202 | GO:0005515 | |
| Ahy6g2678 | 1040 | Coils | Coil | 663 | 683 | - | - | |
| Ahy6g2678 | 1040 | Gene3D | FF domain | 611 | 679 | IPR036517 | - | |
| Ahy6g2678 | 1040 | Gene3D | FF domain | 680 | 761 | IPR036517 | - | |
| Ahy6g2678 | 1040 | Gene3D | FF domain | 536 | 610 | IPR036517 | - | |
| Ahy6g2678 | 1040 | MobiDBLite | consensus disorder prediction | 140 | 160 | - | - | |
| Ahy6g2678 | 1040 | MobiDBLite | consensus disorder prediction | 885 | 955 | - | - | |
| Ahy6g2678 | 1040 | Coils | Coil | 528 | 551 | - | - | |
| Ahy6g2678 | 1040 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
| Ahy6g2678 | 1040 | SMART | FF_2 | 480 | 534 | IPR002713 | - | |
| Ahy6g2678 | 1040 | SMART | FF_2 | 615 | 669 | IPR002713 | - | |
| Ahy6g2678 | 1040 | SMART | FF_2 | 822 | 877 | IPR002713 | - | |
| Ahy6g2678 | 1040 | SMART | FF_2 | 689 | 750 | IPR002713 | - | |
| Ahy6g2678 | 1040 | SMART | FF_2 | 547 | 602 | IPR002713 | - | |
| Ahy6g2678 | 1040 | Gene3D | - | 245 | 288 | - | - | |
| Ahy6g2678 | 1040 | Gene3D | - | 289 | 330 | - | - | |
| Ahy6g2678 | 1040 | SMART | ww_5 | 288 | 320 | IPR001202 | GO:0005515 | |
| Ahy6g2678 | 1040 | SMART | ww_5 | 247 | 279 | IPR001202 | GO:0005515 | |
| Ahy6g2678 | 1040 | Pfam | FF domain | 549 | 599 | IPR002713 | - | |
| Ahy6g2678 | 1040 | Pfam | FF domain | 482 | 531 | IPR002713 | - | |
| Ahy6g2678 | 1040 | Pfam | FF domain | 691 | 746 | IPR002713 | - | |
| Ahy6g2678 | 1040 | Pfam | FF domain | 618 | 666 | IPR002713 | - | |
| Ahy6g2678 | 1040 | Pfam | WW domain | 293 | 318 | IPR001202 | GO:0005515 | |
| Ahy6g2678 | 1040 | Pfam | WW domain | 250 | 277 | IPR001202 | GO:0005515 | |
| Ahy6g2678 | 1040 | Coils | Coil | 804 | 832 | - | - | |
| Ahy6g2678 | 1040 | MobiDBLite | consensus disorder prediction | 9 | 27 | - | - | |
| Ahy6g2678 | 1040 | SUPERFAMILY | WW domain | 280 | 321 | IPR036020 | GO:0005515 | |
| Ahy6g2678 | 1040 | ProSiteProfiles | FF domain profile. | 615 | 669 | IPR002713 | - | |
| Ahy6g2678 | 1040 | Coils | Coil | 596 | 625 | - | - | |
| Ahy6g2678 | 1040 | SUPERFAMILY | FF domain | 607 | 676 | IPR036517 | - | |
| Ahy6g2678 | 1040 | CDD | WW | 293 | 320 | IPR001202 | GO:0005515 | |
| Ahy6g2678 | 1040 | SUPERFAMILY | FF domain | 682 | 757 | IPR036517 | - | |
| Ahy6g2678 | 1040 | PANTHER | PRE-MRNA-PROCESSING PROTEIN 40B | 55 | 1035 | - | - | |
| Ahy6g2678 | 1040 | SUPERFAMILY | WW domain | 251 | 285 | IPR036020 | GO:0005515 | |
| Ahy6g2678 | 1040 | Coils | Coil | 875 | 926 | - | - | |
| Ahy6g2678 | 1040 | Gene3D | FF domain | 817 | 890 | IPR036517 | - | |
| Ahy6g2678 | 1040 | ProSiteProfiles | FF domain profile. | 687 | 750 | IPR002713 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy6g2678 | Ahy-Chr6 | 112231678 | 112241064 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy6g2678 | K12821 | - | gmx:100806019 | 1334.7 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy16g3413 | 16 | 151275182 | 151284593 | Ahy6g2678 | 6 | 112231678 | 112241064 | hybridization |