Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2671 ATGAAGTCTTTCTTGAATGATGGAAACAATACTACTACTACTACTACTACTAATCATGATGATGATAGTAACAATCATAACTGGTTGATGGGTTTCTCTCTCTCACCCCACCACCACCACCACAACATGAAAATGGAGGTTCCCAATGATCATAATCATAATCATCATCATCATCATCATCACCATCAGTATTATCATCATCTTCATCATCCTTCAAGCACTGCCTCAACACCAAGTAGCTTATTCTACTTGTCACCTTCACAGTTGAATAATGCTTCTTCAACAATGTGTTATGCTGAAAACCCTTCTCCCTTTCACTCTTCTCCTTCTCTGGCTATGATGCCACTCAAATCTGATGGCTCACTCTGCATAATGGAAGCTCTCACTACATCACAAACCCAAGTGATGGTGCCAAGTTCTTCATGTTCATCTCCAAAGCTTGAGGACTTTCTAGGTGGTGCAACAATGGGAGCTCATGAATATGGTGAACATGAAAGAGAAGCAATGGCTCTAAGCTTAGACAGCATTTACTATAACACCAACACCAACAATAGCCATCATCATCATCATCATCATCAAAATTCTGAGGCTGAAAACAACAACAGACAACAACATTGTTCTTCTAATTCTTCTTTGGACCTTATTCTCTCAGACCCTTTTAAGCAGCAAGGGCATAATAGTAATAATCATCATCATGAACATGATCATGATGTGAATCAATACTATTCAGCACTTGGCTGCAGCAATGATGGTTCTACTAGCATTCTACCATTTGTTGAAGAAGAAGAAGAAGAAACAACAAAGGAACCTCATCATCATCATCATCAACATCAAATGCATCAAGAACAAGAGAATAATAATTGCTTCATCAGAAACTGGGTTAATGGAAATAATAACAATAATAATAATGGAATGGTGGAAAGTGTTAATGTGAATGTTAATGGTGGAGGTGGGAATTTGAAGACTTTAAGTCTTTCAATGAGTCCTGGTTGTTCATCTACTTCTCAATCATCATCAAGCCATGTAAGTGTTTCAACAACTCATAATCATAATCAGATCACAGCAGGTTCTTCTTCTTCAAATTCTTGCAAGGCCATGGTGGAAGTTGCAAAGAATAATAAGAGAGGACACAATAATAGTAGTAAGCAAACTGTTCATAGGAAATCCATTGAGACATTTGGTCAAAGAACTTCACAGTACAGAGGTGTAACAAGGCATAGATGGACCGGAAGATATGAAGCACATTTGTGGGATAATAGTTGCAAAAAAGAAGGGCAAACTAGGAAAGGAAGACAAGGTGGCTATGATATGGAAGAAAAAGCTGCAAGGGCTTATGATCTTGCAGCCCTTAAGTATTGGGGACCTTCAACACACATAAACTTTCCGCTTGAAAACTACCAAAATGAACTTGAAGAAATGAAGAACATGAACAGGCAGGAATATGTTGCACATTTGAGAAGAAAAAGTAGTGGATTTTCAAGGGGAGCTTCAATGTATAGAGGGGTGACAAGGCATCACCAACATGGGAGATGGCAAGCAAGGATAGGCAGAGTAGCGGGAAATAAGGACCTTTATCTTGGGACATTCAGTACTCAAGAAGAAGCAGCAGAAGCATATGATGTGGCTGCAATCAAATTCCGTGGGGTGAATGCAGTCACAAACTTTGACATTTCAAGATATGATGTTGAAAGGATCATGGCTAGTAACACCCTACTTGCCGGAGAATTAGCCAGAAGGAACAACAACGAGCAGCCGAAGGCGATCGAGGCGGTGCCGGCACCGGCCCCGGCAACAACCCTAGAGTACAATGTTGTAACAAGCCACATCAACAAGAAGAAGGAGTTGGTAGAAGTTGAAGGTTGTAACACCAACAGCAACAACATTGAAAATGGTTCAGATGAATGGAAGAAGATTGGATTTAATGATGATTATAGAAATTGTCAAAATTTCTGTGGTGGTGGGACCCTACAAGATCTAATTGGCATTCAAAACCCTAATATGGGAGGGACTCATTTTTCAAACCCATCTTCACTAGTGACAAGTTTGAGCAACTCATCAAGAGAAGGTAGCCCCGTTCACATGAACAAGAACAACAATAGTAGTCATCACCAAAATGTGTTTCATCAAAAGGTTAATAATAATAATGTTGTTAGCCCTATTATTGTTGCCAATAATACTAGTACTACTAGTGTTGTTAGTTCTTGGTTCCCTTCACCGCCTCTTCAAATTAGGTCTACTATGTCTCCCATGCCCATTTTTGCGGCTTGGACTGAACCCTAG 2280 0.3969 MKSFLNDGNNTTTTTTTNHDDDSNNHNWLMGFSLSPHHHHHNMKMEVPNDHNHNHHHHHHHHQYYHHLHHPSSTASTPSSLFYLSPSQLNNASSTMCYAENPSPFHSSPSLAMMPLKSDGSLCIMEALTTSQTQVMVPSSSCSSPKLEDFLGGATMGAHEYGEHEREAMALSLDSIYYNTNTNNSHHHHHHHQNSEAENNNRQQHCSSNSSLDLILSDPFKQQGHNSNNHHHEHDHDVNQYYSALGCSNDGSTSILPFVEEEEEETTKEPHHHHHQHQMHQEQENNNCFIRNWVNGNNNNNNNGMVESVNVNVNGGGGNLKTLSLSMSPGCSSTSQSSSSHVSVSTTHNHNQITAGSSSSNSCKAMVEVAKNNKRGHNNSSKQTVHRKSIETFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQNELEEMKNMNRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGVNAVTNFDISRYDVERIMASNTLLAGELARRNNNEQPKAIEAVPAPAPATTLEYNVVTSHINKKKELVEVEGCNTNSNNIENGSDEWKKIGFNDDYRNCQNFCGGGTLQDLIGIQNPNMGGTHFSNPSSLVTSLSNSSREGSPVHMNKNNNSSHHQNVFHQKVNNNNVVSPIIVANNTSTTSVVSSWFPSPPLQIRSTMSPMPIFAAWTEP* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2671 759 Coils Coil 463 483 - -
Ahy6g2671 759 CDD AP2 497 558 IPR001471 GO:0003700|GO:0006355
Ahy6g2671 759 MobiDBLite consensus disorder prediction 1 25 - -
Ahy6g2671 759 MobiDBLite consensus disorder prediction 260 283 - -
Ahy6g2671 759 PRINTS Ethylene responsive element binding protein signature 538 558 IPR001471 GO:0003700|GO:0006355
Ahy6g2671 759 PRINTS Ethylene responsive element binding protein signature 400 411 IPR001471 GO:0003700|GO:0006355
Ahy6g2671 759 CDD AP2 398 462 IPR001471 GO:0003700|GO:0006355
Ahy6g2671 759 MobiDBLite consensus disorder prediction 53 68 - -
Ahy6g2671 759 MobiDBLite consensus disorder prediction 264 281 - -
Ahy6g2671 759 ProSiteProfiles AP2/ERF domain profile. 498 556 IPR001471 GO:0003700|GO:0006355
Ahy6g2671 759 SUPERFAMILY DNA-binding domain 497 558 IPR016177 GO:0003677
Ahy6g2671 759 MobiDBLite consensus disorder prediction 679 701 - -
Ahy6g2671 759 SUPERFAMILY DNA-binding domain 398 464 IPR016177 GO:0003677
Ahy6g2671 759 ProSiteProfiles AP2/ERF domain profile. 399 462 IPR001471 GO:0003700|GO:0006355
Ahy6g2671 759 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 25 709 - -
Ahy6g2671 759 MobiDBLite consensus disorder prediction 181 208 - -
Ahy6g2671 759 SMART rav1_2 498 562 IPR001471 GO:0003700|GO:0006355
Ahy6g2671 759 SMART rav1_2 399 468 IPR001471 GO:0003700|GO:0006355
Ahy6g2671 759 MobiDBLite consensus disorder prediction 50 79 - -
Ahy6g2671 759 Pfam AP2 domain 399 454 IPR001471 GO:0003700|GO:0006355
Ahy6g2671 759 Pfam AP2 domain 499 548 IPR001471 GO:0003700|GO:0006355
Ahy6g2671 759 MobiDBLite consensus disorder prediction 327 362 - -
Ahy6g2671 759 Gene3D AP2/ERF domain 398 464 IPR036955 GO:0003700|GO:0006355
Ahy6g2671 759 Gene3D AP2/ERF domain 498 558 IPR036955 GO:0003700|GO:0006355
Ahy6g2671 759 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 25 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2671 Ahy-Chr6 112142769 112147827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2671 298 582 AP2-EREBP Transcription Factor Family AT4G37750 69.536 7.28e-132 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Ahy6g2671 AP2 5.50E-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2671 K09285 - gmx:100798179 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3409 16 151173862 151178835 Ahy6g2671 6 112142769 112147827 hybridization
Ahy6g2671 6 112142769 112147827 Ahy17g3196 17 133966592 133970358 PCT
Ahy6g2671 6 112142769 112147827 Ahy8g0905 8 17533198 17536420 PCT
Ahy17g3196 17 133966592 133970358 Ahy6g2671 6 112142769 112147827 PCT
Ahy8g0905 8 17533198 17536420 Ahy6g2671 6 112142769 112147827 PCT