Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2668 ATGGGGGGTCATGAGAATGCAATGGGGTTTCATCATGGAAATGAGAGCATTCTGACAAATAATGTTAATGTCTCAGAAATGGATATGAGTTCTTCTATGTCATTGGCTAAGTCTTCTTCTTCAGATGTTGTTGTACCTAATAGTAACCCTTTTCTTGCTTCTTCTTCTTCTTGGGATCCAATTGTTTCCTTAAGCCAATCTCAAACTTTTGGAGGGTCATCAATGGTTACTACTCACAATAGTGATTTTGGAAATTCTTCATCTTACCCTTTTGTTCAATATATGTCTGACTCAACCAATCTTGAGGGCATTATGGTCCACAAAATTCCATCTTTTGGAAGTGGAAACTTCTCAGAAATTGTTGGATCCTTTTGTCAAGAAGGGTCTTCTGATATACCTAACATGGGGTTTAGACCAAGTTATAATCATGGCAATGATGCTGGAACCGAAAGAGCTCCAATGAATGAACAATCTCAGGTTGAGGACTCAATTACTGAAGATGGTGCACCAGGAACTGCACCTAGTGGAAATCAAAGAAAGCGCATGCTTGATCATGATTCTTCTTTCAGTCCAAACAAGAATGCTGGTGGCGATGAACTGAAAGACTCTCCAAGGACGATATCTGATGGTGCTAAAGAACATGAAAAGAAGGCGAAAGTCGAGCAGAATGTGAGTGCTGATTTGCGAGGCAAGCAACCGGCAAAGCAATCAAAAGAAAATTCTCCAAGTGGAGAAGCTCCTAAAGAAAATTTCATCCATGTGAGAGCAAGAAGGGGCCAAGCTACAAACAGTCACAGCCTTGCAGAAAGGGTGAGAAGAGAAAAGATTAGTGAGAGAATGAGATTGCTCCAAGAACTTGTTCCAGGGTGCAACAAGATAACTGGCAAAGCAGTAATGCTGGATGAGATTATAAACTATGTGCAGTCACTGCAGCAACAAGTTGAGTTTTTGTCCATGAAACTTGCCACAGTGAACCCGGAACTGAATTTTGACGTAGAACGGATCCTGTCGAAGGAAATTCTTCAATCGCGCTTAGGACATGGAATTGTTGGATATGGTGTTGGTATGAACTCCCCTCACCCATTCTCCAATGGAAGTTTTCAAGGAAACATGGCTGGCATGCCTAGTACATCAACACAATTCCCTCCTTTGCCTCAGGGTGTTTTGGATCATGAGTTCCAAAGTCTTTATGGAATGGGGTATGATCCTAATACAGCACTTGACAATTTGGGACCAAATGGAAGATTGAAAACAGAATTATAG 1263 0.4125 MGGHENAMGFHHGNESILTNNVNVSEMDMSSSMSLAKSSSSDVVVPNSNPFLASSSSWDPIVSLSQSQTFGGSSMVTTHNSDFGNSSSYPFVQYMSDSTNLEGIMVHKIPSFGSGNFSEIVGSFCQEGSSDIPNMGFRPSYNHGNDAGTERAPMNEQSQVEDSITEDGAPGTAPSGNQRKRMLDHDSSFSPNKNAGGDELKDSPRTISDGAKEHEKKAKVEQNVSADLRGKQPAKQSKENSPSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVERILSKEILQSRLGHGIVGYGVGMNSPHPFSNGSFQGNMAGMPSTSTQFPPLPQGVLDHEFQSLYGMGYDPNTALDNLGPNGRLKTEL* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2668 420 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 258 328 IPR036638 GO:0046983
Ahy6g2668 420 SMART finulus 266 316 IPR011598 GO:0046983
Ahy6g2668 420 Gene3D - 257 331 IPR036638 GO:0046983
Ahy6g2668 420 MobiDBLite consensus disorder prediction 151 165 - -
Ahy6g2668 420 Pfam Helix-loop-helix DNA-binding domain 263 311 IPR011598 GO:0046983
Ahy6g2668 420 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 16 420 - -
Ahy6g2668 420 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 16 420 IPR024097 GO:0006355
Ahy6g2668 420 MobiDBLite consensus disorder prediction 135 248 - -
Ahy6g2668 420 MobiDBLite consensus disorder prediction 198 224 - -
Ahy6g2668 420 CDD bHLH_AtBPE_like 250 335 - -
Ahy6g2668 420 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 260 310 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2668 Ahy-Chr6 112107885 112112102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2668 1 420 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 41.822 4.60e-82 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy6g2668 HLH 4.40E-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2668 - - gmx:100794464 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3407 16 151130854 151134988 Ahy6g2668 6 112107885 112112102 hybridization