Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2659 ATGGGGAGAGCTCCTTGCTGTGACAAAGCAAATGTGAAGAAAGGGCCATGGTCTCCTGAAGAAGATGCTAAGCTCAAATCATACATACAACAACATGGCACTGGTGGCAATTGGATTGCTTTGCCTCCAAAAATTGGATTGAAGCGTTGTGGGAAGAGTTGCCGTCTAAGGTGGTTGAACTATCTTCGCCCTAATCTCAAGCATGGTGATTTCTCTGAAGAAGAAGACAACATTATTTGTAGCCTCTATGTTAGTATTGGAAGCAGATGGTCAGTTATTGCTGCTCAATTGCCAGGAAGAACTGATAATGACATAAAGAACTATTGGAACACAAGGCTCAAAAAGAAGCTTCTTGGGAATAACAAGAACCGCCGCAACAAAGAACAGCAACACTTACAAGCATGTAGCAATAATGGAATCAACAAGCAACAAGAAACATCATCAATTAATGGAGGGAGTGTTATTATTCGTGATGATTCCTTATCTTCCTTATTGGTTCATGAAAATAGTAGTACTACTCAACAACAATGTTATTGGCCACACTTCATGCCAGTGTTGCCAATACCAAATTTGCCATATAGCACAACAAATAATAACCAACAATTCTACTTAGGATCTTCTTTCAATGACCAAGATTCCATCAAGAAACTACTTATCAAGCTTGGAGGGAGATTCCATAATGATGTTGATTATGATAATTACCATCCTACCCTTGGTGATGGATTATTGAATCATCTTCATCAATCACAAGGTACTACTACTACTACTTATTATTCTAATAATTCAACACAACAACAAGTAGTTTATCATCAAGAACAAATACAATTTGATGATGGTAATAATGGACTTCATCATGATGAAATGGTGCAAAGAAAAGGAAACCTCAACAATGAAATTGAAGAAGAAATGGTGGGTAATACTAATTTTATTCCACAAAGATTATTAAATAATGGGTTGGAGTTCTTACATGGAGACATGGTTTTCAGTGAGGATAAGATTATAATAGGCTCTAGTACTACTAGGCCTAATTGGGGTGAGAATAGTAGTGGCAATTCAGTAATTTACCACCCTCTTGTTTCTTCTTCAAATTACCAAGAAGATGAAGGTGTAAGGGCATCAGAAGAATGTGGTTTGCAAGAGTATAGCACTATAGCCACCATGAGGAGCAATAGTAGCAATAGCATGCTTCATGTACAATAA 1200 0.3717 MGRAPCCDKANVKKGPWSPEEDAKLKSYIQQHGTGGNWIALPPKIGLKRCGKSCRLRWLNYLRPNLKHGDFSEEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNTRLKKKLLGNNKNRRNKEQQHLQACSNNGINKQQETSSINGGSVIIRDDSLSSLLVHENSSTTQQQCYWPHFMPVLPIPNLPYSTTNNNQQFYLGSSFNDQDSIKKLLIKLGGRFHNDVDYDNYHPTLGDGLLNHLHQSQGTTTTTYYSNNSTQQQVVYHQEQIQFDDGNNGLHHDEMVQRKGNLNNEIEEEMVGNTNFIPQRLLNNGLEFLHGDMVFSEDKIIIGSSTTRPNWGENSSGNSVIYHPLVSSSNYQEDEGVRASEECGLQEYSTIATMRSNSSNSMLHVQ* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2659 399 CDD SANT 71 113 IPR001005 -
Ahy6g2659 399 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Ahy6g2659 399 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Ahy6g2659 399 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Ahy6g2659 399 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Ahy6g2659 399 PANTHER OS09G0431300 PROTEIN 1 254 - -
Ahy6g2659 399 CDD SANT 16 62 IPR001005 -
Ahy6g2659 399 Gene3D - 7 68 - -
Ahy6g2659 399 PANTHER OS09G0431300 PROTEIN 1 254 - -
Ahy6g2659 399 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Ahy6g2659 399 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Ahy6g2659 399 SMART sant 13 64 IPR001005 -
Ahy6g2659 399 SMART sant 67 115 IPR001005 -
Ahy6g2659 399 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Ahy6g2659 399 Gene3D - 69 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2659 Ahy-Chr6 111996204 111998222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2659 1 220 MYB Transcription Factor Family AT3G49690 59.091 5.24e-82 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy6g2659 Myb_DNA-binding 2.20E-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2659 K09422 - gmx:100800290 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3396 16 150997104 150999289 Ahy6g2659 6 111996204 111998222 hybridization
Ahy6g2659 6 111996204 111998222 Ahy17g3189 17 133839606 133841529 PCT
Ahy6g2659 6 111996204 111998222 Ahy8g0899 8 17391975 17393770 PCT
Ahy17g3189 17 133839606 133841529 Ahy6g2659 6 111996204 111998222 PCT
Ahy8g0899 8 17391975 17393770 Ahy6g2659 6 111996204 111998222 PCT