Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2657 ATGGAGATGGAGGAATACCCTAATAATAATAATAATAATAACTTGAGGCAAGAAAAGAGAGGTGCAAATGCAATAAGGCCAAGTTTCTTGTACTCATCAACTACTAATACTGCTTCTCTTCATAATCATCATCATCATCACCACCAAGTTCCAATCAACACCTTTAATCTTCAATCTTCAGATCATCATCATCAACAATGTTTTGAATCTGATGATAATCATCAAGTTCTTGTTGTGAAGACTGAAGCAATTAGCACCACCCCACATCATCACTATCCTTTGTTGAGGGGAAACAATAATAATATGCATCATCCCCACCATAGCCAGCAACACCATCATCATCATCAACAAGGACGGAATTACAACCAAACCTCCAATAATGGTGGTGGTGAAGTTGATGCCATCAAAGCCAAAATCATTGCTCATCCTCACTACTCTAATCTCTTAGAAGCTTACATGGATTGCCAAAAGGTCGGAGCTCCGCCGGAAGTGGTGGCGCGACTGGTGGCGGCGAGGCAGGAATTTGAGGCACGGCAACGATCTTCAGTTAGCTCAAGGGAAAGTTCCAATAAGGACCCAGAACTTGACCAATTCATGGAAGCTTACTATGACATGCTTGTGAAGTATAGAGAGGAATTAACAAGGCCTATAGAAGAGGCTATGGATTTCATGAGAAGAATAGAAACACAGCTAAATATGCTTTGCAATGGACCCGTTAGGATCTTCCAAGATGAGAAATGTGAAGGAGAAGGAGGTGGTTCATCGGAAGAGGAACAAGAGGGAGATACAGAAGTAGCAGAGATTGATCCAAGAGCTGAAGACCGTGAACTGAAGAACCATTTGCTTAGAAAATATAGTGGTTACTTGAGTAGCCTTAAGCAAGAACTCTCCAAGAAGAAGAAGAAAGGAAAACTCCCTAAGGATGCTAGGCAGAAGCTCCTTAACTGGTGGGAACTTCATTACAAATGGCCTTATCCTTCGGAATCAGAGAAGGTGGCACTAGCAGAATCAACAGGTTTGGACCAAAAGCAAATTAACAACTGGTTCATAAATCAAAGGAAGAGGCACTGGAAACCCTCTGAAGACATGCAGTTCATGGTGATGGATGGCCTTCATGCTCATCAGAAACAAACCCTCTATATGGATCCTCATTACTTGCCTGATCCTCACTACCGTCTAGCTCCATGA 1188 0.4217 MEMEEYPNNNNNNNLRQEKRGANAIRPSFLYSSTTNTASLHNHHHHHHQVPINTFNLQSSDHHHQQCFESDDNHQVLVVKTEAISTTPHHHYPLLRGNNNNMHHPHHSQQHHHHHQQGRNYNQTSNNGGGEVDAIKAKIIAHPHYSNLLEAYMDCQKVGAPPEVVARLVAARQEFEARQRSSVSSRESSNKDPELDQFMEAYYDMLVKYREELTRPIEEAMDFMRRIETQLNMLCNGPVRIFQDEKCEGEGGGSSEEEQEGDTEVAEIDPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLLNWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHAHQKQTLYMDPHYLPDPHYRLAP* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2657 395 MobiDBLite consensus disorder prediction 95 130 - -
Ahy6g2657 395 ProSiteProfiles 'Homeobox' domain profile. 296 359 IPR001356 GO:0003677
Ahy6g2657 395 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 3 387 - -
Ahy6g2657 395 MobiDBLite consensus disorder prediction 245 273 - -
Ahy6g2657 395 Pfam ELK domain 276 297 IPR005539 GO:0003677
Ahy6g2657 395 SUPERFAMILY Homeodomain-like 297 370 IPR009057 -
Ahy6g2657 395 SMART HOX_1 298 363 IPR001356 GO:0003677
Ahy6g2657 395 Gene3D - 301 363 - -
Ahy6g2657 395 CDD homeodomain 308 360 IPR001356 GO:0003677
Ahy6g2657 395 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 3 387 - -
Ahy6g2657 395 ProSitePatterns 'Homeobox' domain signature. 334 357 IPR017970 GO:0000981|GO:0006355
Ahy6g2657 395 SMART KNOX2_2 185 236 IPR005541 GO:0003677|GO:0005634
Ahy6g2657 395 SMART ELK_2 276 297 IPR005539 GO:0003677
Ahy6g2657 395 Pfam KNOX2 domain 190 235 IPR005541 GO:0003677|GO:0005634
Ahy6g2657 395 Pfam Homeobox KN domain 316 355 IPR008422 GO:0003677|GO:0006355
Ahy6g2657 395 Pfam KNOX1 domain 134 176 IPR005540 GO:0003677|GO:0005634
Ahy6g2657 395 ProSiteProfiles ELK domain profile. 276 296 IPR005539 GO:0003677
Ahy6g2657 395 SMART KNOX1_2 133 177 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2657 Ahy-Chr6 111953700 111965268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2657 65 395 Homeobox Transcription Factor Family AT4G08150 64.602 3.23e-142 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Ahy6g2657 KNOX2 5.80E-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2657 - - gmx:100800822 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3393 16 150935808 150946557 Ahy6g2657 6 111953700 111965268 hybridization