Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2653 ATGGGAAGAGCTCCTTGTTGTGACAAAGCAAATGTGAAGAGAGGACCATGGTCTCCTGATGAGGATGCAACACTCAAGAACTATCTTCACACTCATGGCACTGGAGGAAATTGGATTGCATTGCCAAGAAAAGCTGGTTTAAGGAGGTGTGGGAAGAGTTGCCGTCTAAGGTGGCTGAATTATCTAAGGCCAGATATAAAACATGGAGGATTTACCGAACAAGAGGATCAAATCATTTGCACTCTCTATACTCAAATGGGAAGCAGATGGTCTGCAATAGCATCTCAACTTCCTGGCAGAACAGACAATGATGTCAAAAACTATTGGAACACCAAGCTCAAGAAGAAGCTAATGGCAGGAAAAGTAATTTCCCCTAATAATAATAATAATAATAAAACATTATTGACTACTCAACAAAACTCAGATTTTCAAGATAATAAAAATTGTTCACCACCCTCATCATCATCATCATTAGTGCATCTTCCAATTTTAAGCAATGATATTAATAATTTTAGTTCTAACCTAAGTCTTGACCTAATTCATCAACAACTCTATAGTCCACAATTTATGAATTTAGAAATTGGTGGTGCAAATTCAAGGAACAACAAGAATAATAATAGTAGTAGTAATATTGAAGGTTCAACTTCTTCTTCATCACTTGCATTATTGGACTACAAGGGTGGATCATCACTTCTAGAAGAAGAAAAACAACATGGTGTTGGTGGTGATAATGATGAATCTAATAAGGAATTCTTGATGGATTTAGGGTTTGATGGTGAATTTTCTCAAAGTATTAGTAGTTATTGTTACTCTGAGTGGGTTGATTTCAACTGTGCTGAAATTAAGCCACATTGA 855 0.3602 MGRAPCCDKANVKRGPWSPDEDATLKNYLHTHGTGGNWIALPRKAGLRRCGKSCRLRWLNYLRPDIKHGGFTEQEDQIICTLYTQMGSRWSAIASQLPGRTDNDVKNYWNTKLKKKLMAGKVISPNNNNNNKTLLTTQQNSDFQDNKNCSPPSSSSSLVHLPILSNDINNFSSNLSLDLIHQQLYSPQFMNLEIGGANSRNNKNNNSSSNIEGSTSSSSLALLDYKGGSSLLEEEKQHGVGGDNDESNKEFLMDLGFDGEFSQSISSYCYSEWVDFNCAEIKPH* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2653 284 CDD SANT 71 113 IPR001005 -
Ahy6g2653 284 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Ahy6g2653 284 PANTHER OS09G0431300 PROTEIN 1 226 - -
Ahy6g2653 284 CDD SANT 16 62 IPR001005 -
Ahy6g2653 284 Gene3D - 7 68 - -
Ahy6g2653 284 PANTHER OS09G0431300 PROTEIN 1 226 - -
Ahy6g2653 284 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Ahy6g2653 284 MobiDBLite consensus disorder prediction 196 215 - -
Ahy6g2653 284 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Ahy6g2653 284 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Ahy6g2653 284 SMART sant 13 64 IPR001005 -
Ahy6g2653 284 SMART sant 67 115 IPR001005 -
Ahy6g2653 284 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Ahy6g2653 284 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Ahy6g2653 284 Gene3D - 70 150 - -
Ahy6g2653 284 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2653 Ahy-Chr6 111848961 111851935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2653 1 118 MYB Transcription Factor Family AT5G65790 80.508 1.29e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy6g2653 Myb_DNA-binding 8.50E-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2653 K09422 - gmx:100789985 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3390 16 150860555 150863343 Ahy6g2653 6 111848961 111851935 hybridization