Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g2642 ATGGCTTCCGCAGCCTCTCCAAGAATACCCACCGAGACGGTGAAGAACGCCGTGGAGGCTCTCCTGAAGTGGCGAGATTCCAATTCCGAGTCTCACAAACCCAAACTCTTCGACGCCGACGAAGAATTCGTTTACTTAGTCGTCACTCTGAAAACCATCCCTCACAAATCCCGCGTTAACTCTTACAAGGTCCCTTTACCCCACTCTCTCCTCTCTCCCTTCAACGAAACTTGCCTCATCATCGACGACAGGTCCAAATCCAAACTCACTAAACAAGAAGCTCAAAAGAAGATCAAGGCCGATAACGTCGCCGTTTCCAAGGTCCTCAGGTTGTCGAAGCTGGCCTCCGATTACCGCCCTTTTGAGGCGAAGCGGAAGCTCTGTGATTCATATGATCTTTTTTTCGCTGATAAGAGAGTGGTGCCTTTGATGCCCAGGCTGTTGGGGAAGAAATTCTTTAAGAAGAAGAAGGTGCCGGTGCAGGTGGACTTGATTAAGAAGAATTGGAAGGAGCAGGTGGATAAGGCGTGTTCGTCGGCGCTTCTGTTTCTTGGAACGGGGACTTGTTGTGTTGTGAAGGTTGCCAAGGTTTCCATGGAGAGCGAGCAGATTGTTGAGAATATGATGGCTGCCATTGAGGGGGTTGTTGAGGTTGTGCCGAAGAAGTGGGCGAATGTGAGGTCCTTGCATGTTAAGCTTTACGAGTCGCTGGCGCTGCCTGTTTTCTAGGCTGTTCCGGAGGTGAAGTTGAGGATTGAGGGAAGTAAGGTTGAGGAGGCGGAGAAAGAGAAGCAGATGATGGAGGAGGAGGAAGAGGGCGAAGACCATAGTGGCGCGAAGGCGGTGAAGAAGAAGAAGAAGAAGAAGAAGGGGAGGATTCATGAAGTTAGATACATGGATAGCGAAGTTGGTGAGGATAATGTTGAAGATGTGGCAGGTAGTGAGGATGATGGTGGTGGTGTTGTTATGGAGGAAGATTTAAAGGATGCTGGAAAAGGTAGTGGAGAATTGATGAATAAGAAGAGGAAGAAAGGGGCATTGAGTGAGTTGAGCAGTGTCAAAGAATTGAAAAAATCTGTTAAGAGAAGAGGTAAACAGGATAAATCTGCGAAAGTGATGAAGGAAAATTCCATCAAGAAGAGTCAGAATAGTGAATTATCTGTTGAGGATGGAGATTCAGGAAAGAAGGGGAAGAATATCAAGAAGAAACTATCTCTATTGAAGTCAGAAGAAGCTGATTTGAAAAAGAAAGTGAGGGCCAAGAAAAGTATGCCTGTTGGTCCTTACTTGTATGCAAATGATCTTAATGATGTCTTGAAGAAGAAGCATGCTTCTGGAGGATACAAAAGCCTTGTGTTTTATCTAGAGGCATGTGAATCTGGGAGTATCTTTGAAGGCCTTCTTCCTGAAGACATAAATATTTACGCGACGACGGCTTCAAACACGGTCGAGAGCAGTTGGGGAACATATTGCTACTCAACCTGCTTGGGTGACCTCTACAGTATTTCTTGGATGGAAGACAGTGACACACACAATTTGAGGACAGAAACTTTACACCAACAATATAAATTGGTCAAAGATAGGACTTTGAATGGAAACGCATACTATGGCTCTCATGTGATGCAATATGGTGACGTAGGGATCAGCGAGAACCTTCTTTTCCAATATTTGGGAACAAATCCTGCCAATGATAATTACACTTTTGTGGATGAAAATTCCTTGAGGACACCTTCAAAAGCAGTGAACCAACGCGATGCGGACCTCATTCATTTCTGGGAGAAGTTCCGCAAAGCGCCCGAGGGTTCTTCGAGTAAGATCACGGCACAGAAACAAGTTGTGGAAGTGATGTCTCACAGAATGCACATAGACAACAGTGTGAAACTCATTGGAAATCTCTTATTTGGCACTGAAAAGGGTCCTGAATTGCTAAGTGCAGTTAGACCTGCAGGGAAGCCTCTTGTTGATGACTGGGATTGCCTCAAAAACATGGTAAGGACTTTTGAGACACATTGTGGATCCTTATCTCAATATGGAATGAAACATATGAGAACCTTTGCAAACATCTGCGATGCTGGGATCCATAAAGATCAAATGGATGAGGCCACAGCACAAGCATGTGTTAGCATCCCTTCCAATCCATGGAGTTCTCTTGAGAGGGGTTTTAGTGCATAA 2172 0.4521 MASAASPRIPTETVKNAVEALLKWRDSNSESHKPKLFDADEEFVYLVVTLKTIPHKSRVNSYKVPLPHSLLSPFNETCLIIDDRSKSKLTKQEAQKKIKADNVAVSKVLRLSKLASDYRPFEAKRKLCDSYDLFFADKRVVPLMPRLLGKKFFKKKKVPVQVDLIKKNWKEQVDKACSSALLFLGTGTCCVVKVAKVSMESEQIVENMMAAIEGVVEVVPKKWANVRSLHVKLYESLALPVF*AVPEVKLRIEGSKVEEAEKEKQMMEEEEEGEDHSGAKAVKKKKKKKKGRIHEVRYMDSEVGEDNVEDVAGSEDDGGGVVMEEDLKDAGKGSGELMNKKRKKGALSELSSVKELKKSVKRRGKQDKSAKVMKENSIKKSQNSELSVEDGDSGKKGKNIKKKLSLLKSEEADLKKKVRAKKSMPVGPYLYANDLNDVLKKKHASGGYKSLVFYLEACESGSIFEGLLPEDINIYATTASNTVESSWGTYCYSTCLGDLYSISWMEDSDTHNLRTETLHQQYKLVKDRTLNGNAYYGSHVMQYGDVGISENLLFQYLGTNPANDNYTFVDENSLRTPSKAVNQRDADLIHFWEKFRKAPEGSSSKITAQKQVVEVMSHRMHIDNSVKLIGNLLFGTEKGPELLSAVRPAGKPLVDDWDCLKNMVRTFETHCGSLSQYGMKHMRTFANICDAGIHKDQMDEATAQACVSIPSNPWSSLERGFSA* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g2642 722 PANTHER HEMOGLOBINASE FAMILY MEMBER 422 721 IPR001096 GO:0006508|GO:0008233
Ahy6g2642 722 Coils Coil 249 276 - -
Ahy6g2642 722 MobiDBLite consensus disorder prediction 257 396 - -
Ahy6g2642 722 Gene3D - 184 239 - -
Ahy6g2642 722 CDD Ribosomal_L1 14 241 IPR028364 -
Ahy6g2642 722 MobiDBLite consensus disorder prediction 320 374 - -
Ahy6g2642 722 Gene3D - 417 581 - -
Ahy6g2642 722 PANTHER VACUOLAR-PROCESSING ENZYME 422 721 - -
Ahy6g2642 722 MobiDBLite consensus disorder prediction 257 279 - -
Ahy6g2642 722 SUPERFAMILY Ribosomal protein L1 12 242 IPR023674 -
Ahy6g2642 722 Gene3D - 582 710 IPR046427 -
Ahy6g2642 722 Pfam Peptidase C13 family 423 557 IPR001096 GO:0006508|GO:0008233
Ahy6g2642 722 Pfam Ribosomal protein L1p/L10e family 34 236 IPR028364 -
Ahy6g2642 722 Gene3D - 87 179 IPR016095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g2642 Ahy-Chr6 111704178 111709657 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g2642 130 232 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 31.068 6.45e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g2642 K01369 - ahf:112697689 1343.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3380 16 150732248 150738056 Ahy6g2642 6 111704178 111709657 hybridization