Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3196 ATGAAGTGGATCAACAGTGATGGTAACAATCATAACGCCTGGTTGGGCTTCTCTCTCTCACCCCATCACATGAAATTCGACCTTCCTAATTCTTCTTCTTCTTCTTCTACTTCGTCCTCCTCCTGCGGTGGGGATCACAGTGCTGCCTTTCATTCTCAGTTGAGCGTGATGCCTCTCAAGTCAGACGGTTCACTTTGCATCATGGAAGCTCTCACTAGATCACATCAAACACAACAAGTGATGGTTGGTAGTTCGTCTCCGAAGCTGGAAGACTTTCTGGGTGGTGCAAGCATGGGAACACACGAAAGAGAGGCCATTGACACCATCTACTACCCTCCTCATAGAGGCTTTCTCTCAGAGCCTTTGAGGCATCCACCATATTACTCCCTTGGCTGCCATGGCATGTACCAAGCACCACCCCCAACAATGCCCCACATAGCAGAAGCAGCAGCAGAAGAAGAAGAAGAAGAAGAAGAAGGCATTGATGGATTCAAGAAGTGGGTGGAGCAGCAGCAGCAGCAGCAGCAGCAGTCGCTGAGTCTGTCAATGAGTCCAGGGTCGGAGTCAAGTTGTGTAACAGCTGCGAGGCATGAGAATGGGAAGAGTGAGTCGTCGGTGGTGGCAGTAACAGTAATGGACAATAGCAACAAGAAGAGAGGGCTAGCTAACAAGCAACCAGTTCACAGAAAATCCATTGACACTTTTGGTCAGAGAACTTCTCAGTATCGAGGCGTCACCAGGCATAGATGGACTGGTAGATACGAAGCACATTTATGGGATAACACTTGCAAGAAGGAAGGCCAAACTAGGAAAGGAAGACAGGTGTATTTGGGGGGTTATGATATGGAACAAAAAGCTGCAAGAGCCTATGATCTTGCTGCCCTTAAGTACTGGGGACCTTCAACCCACATCAATTTTCCGTTGGAAAATTACCAAGCGGAACTTGAGGAGATGAAGAACATGACCAGGCAGGAATATGTCGCTCACTTGAGAAGAAAAAGCAGTGGATTTTCTAGGGGTGCTTCAATATACAGAGGGGTGACAAGACATCATCAACATGGAAGATGGCAAGCAAGGATTGGCAGAGTTGCTGGGAACAAGGACCTTTACCTTGGGACATTCAGCACTCAAGAGGAGGCAGCAGAAGCATATGATGTAGCAGCAATCAAGTTCCGTGGTTCCAATGCAGTTACAAACTTTGACATATCAAGATACGACGTGGAAAGAATCATGGGGAGTAACACTTTGCTTGCAGGGGAGCTAGCTAGGCGAAACAACAAAGATACTGCTATTGAACCACCAAGATGGGAGGCCATTGAATACAACACGAATGTGGAAGCAGTTCAAGCTAGAAACAACAACAATGACAATAATAATAATAATAATAACAATGATGTTGATTCCAACTGGAAGATGGTTTCTGGTGGTGCTTTCTCTGTGGGGATACATGATCTGATTGGGATTGAAGGGCAGCATCAGCATCAGCATCAGCATCATCAGCAGCAGCCATTGATGGAGGCTTCTTCGCTTGTGACCAGCCTAAGCAGCTCAAGAGAGGCTAGCCCTGATAAAATAATGGGTCCCTCGTCAATGATCTTTCCAAAACCTCTTCAACTTGAACCCAAGATGGTTCTTAACAACCCCTTAACTAGTACTGGTGTTGTTGGATCTTGGTTCCCTTCTCAAATGAGGCCAGCTTCTGCTGCCATCTCTTTGTCTCACTTGCCTGTTTTTGCTGCTTGGAACGATACCTAG 1755 0.4661 MKWINSDGNNHNAWLGFSLSPHHMKFDLPNSSSSSSTSSSSCGGDHSAAFHSQLSVMPLKSDGSLCIMEALTRSHQTQQVMVGSSSPKLEDFLGGASMGTHEREAIDTIYYPPHRGFLSEPLRHPPYYSLGCHGMYQAPPPTMPHIAEAAAEEEEEEEEGIDGFKKWVEQQQQQQQQSLSLSMSPGSESSCVTAARHENGKSESSVVAVTVMDNSNKKRGLANKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNTCKKEGQTRKGRQVYLGGYDMEQKAARAYDLAALKYWGPSTHINFPLENYQAELEEMKNMTRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGSNAVTNFDISRYDVERIMGSNTLLAGELARRNNKDTAIEPPRWEAIEYNTNVEAVQARNNNNDNNNNNNNNDVDSNWKMVSGGAFSVGIHDLIGIEGQHQHQHQHHQQQPLMEASSLVTSLSSSREASPDKIMGPSSMIFPKPLQLEPKMVLNNPLTSTGVVGSWFPSQMRPASAAISLSHLPVFAAWNDT* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3196 584 Pfam AP2 domain 343 393 IPR001471 GO:0003700|GO:0006355
Ahy17g3196 584 Pfam AP2 domain 241 299 IPR001471 GO:0003700|GO:0006355
Ahy17g3196 584 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 175 582 - -
Ahy17g3196 584 SUPERFAMILY DNA-binding domain 240 309 IPR016177 GO:0003677
Ahy17g3196 584 ProSiteProfiles AP2/ERF domain profile. 343 401 IPR001471 GO:0003700|GO:0006355
Ahy17g3196 584 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 35 104 - -
Ahy17g3196 584 SMART rav1_2 343 407 IPR001471 GO:0003700|GO:0006355
Ahy17g3196 584 SMART rav1_2 241 313 IPR001471 GO:0003700|GO:0006355
Ahy17g3196 584 CDD AP2 342 403 IPR001471 GO:0003700|GO:0006355
Ahy17g3196 584 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 175 582 - -
Ahy17g3196 584 SUPERFAMILY DNA-binding domain 342 403 IPR016177 GO:0003677
Ahy17g3196 584 Gene3D AP2/ERF domain 343 403 IPR036955 GO:0003700|GO:0006355
Ahy17g3196 584 Gene3D AP2/ERF domain 240 309 IPR036955 GO:0003700|GO:0006355
Ahy17g3196 584 PRINTS Ethylene responsive element binding protein signature 242 253 IPR001471 GO:0003700|GO:0006355
Ahy17g3196 584 PRINTS Ethylene responsive element binding protein signature 383 403 IPR001471 GO:0003700|GO:0006355
Ahy17g3196 584 CDD AP2 240 307 IPR001471 GO:0003700|GO:0006355
Ahy17g3196 584 ProSiteProfiles AP2/ERF domain profile. 241 307 IPR001471 GO:0003700|GO:0006355
Ahy17g3196 584 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 35 104 - -
Ahy17g3196 584 MobiDBLite consensus disorder prediction 168 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3196 Ahy-Chr17 133966592 133970358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3196 3 431 AP2-EREBP Transcription Factor Family AT4G37750 54.675 6.68e-160 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Ahy17g3196 AP2 3.70E-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3196 K09285 - gmx:100787223 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3196 17 133966592 133970358 Ahy17g3196 17 133966592 133970358 ECH
Ahy17g3196 17 133966592 133970358 Ahy8g0905 8 17533198 17536420 hybridization
Ahy16g3409 16 151173862 151178835 Ahy17g3196 17 133966592 133970358 PCT
Ahy6g2671 6 112142769 112147827 Ahy17g3196 17 133966592 133970358 PCT
Ahy17g3196 17 133966592 133970358 Ahy16g3409 16 151173862 151178835 PCT
Ahy17g3196 17 133966592 133970358 Ahy6g2671 6 112142769 112147827 PCT