Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3189 ATGGGTAGGGCACCTTGCTGTGACAAAGCAAACGTGAAGAAAGGGCCATGGTCCCCAGAAGAAGATTCCAAACTCAAATCCTACATCGAACAACACGGCACTGGTGGCAACTGGATTGCTTTGCCCCAAAAGATCGGGCTTAAGCGATGTGGCAAGAGTTGCCGTCTGCGGTGGCTCAACTACCTTCGCCCTAATCTCAAGCACGGTGGCTTCTCCGAAGAAGAAGACAACATCATTTGCAGCCTCTATGTTACTATTGGAAGCAGGTGGTCGGTGATTGCAGCTCAGTTGCCTGGAAGAACAGACAACGACATAAAGAACTATTGGAACACCAAGCTCAAGAAGAAGCTTCTGGGAAAACACCGCACTAATAATAACAAAGAGCACCACCAACAACCACGTTCTAGAAAGCAAGCATCAACAACCAATAATACTAGTGTTACCGGGGATTTTTCATCATCATCATCATCATCTGCTACTGCTACTTATTGGTCACACATGCATATGCCTATGCTGCCACTACCACCACCACCACCACCATTACCACCGTTGCCATACGCAGAAGATAATAATAGTAACAATGAAGGGCCCAGTTTCAACGACCAAGACTCTCTCAGAAAACTTCTTATCAAGCTCGGAGGAAGATTCTCCAACAACAATTTTAGTGAGGATTATCAGCCACCACCACTTGATGATGGGGTCATCATGAATTTTCATCAATTCCCTTCTTATGAAGAAGAACAAATTCATTGTCATCATAATATTGGTTCATCATCTGGTTGCATGAATAATAATTATCCACAAAGGTTAGATGGATTGGAGTTCTTTTACGGAGAGGAAATGGCTGTAACTAATGATGAGAAGATAATAGAAACTGGTGGTGCTTCTAATAATAATAACACCACACTGATTTATCCTCCTCTTCATGAAGATTTCAGCTACCGCACCCCGCAATAG 957 0.4347 MGRAPCCDKANVKKGPWSPEEDSKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNLKHGGFSEEEDNIICSLYVTIGSRWSVIAAQLPGRTDNDIKNYWNTKLKKKLLGKHRTNNNKEHHQQPRSRKQASTTNNTSVTGDFSSSSSSSATATYWSHMHMPMLPLPPPPPPLPPLPYAEDNNSNNEGPSFNDQDSLRKLLIKLGGRFSNNNFSEDYQPPPLDDGVIMNFHQFPSYEEEQIHCHHNIGSSSGCMNNNYPQRLDGLEFFYGEEMAVTNDEKIIETGGASNNNNTTLIYPPLHEDFSYRTPQ* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3189 318 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Ahy17g3189 318 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Ahy17g3189 318 PANTHER OS09G0431300 PROTEIN 1 169 - -
Ahy17g3189 318 MobiDBLite consensus disorder prediction 174 201 - -
Ahy17g3189 318 Gene3D - 70 146 - -
Ahy17g3189 318 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Ahy17g3189 318 Gene3D - 7 68 - -
Ahy17g3189 318 CDD SANT 16 62 IPR001005 -
Ahy17g3189 318 CDD SANT 71 111 IPR001005 -
Ahy17g3189 318 MobiDBLite consensus disorder prediction 187 201 - -
Ahy17g3189 318 SMART sant 67 115 IPR001005 -
Ahy17g3189 318 SMART sant 13 64 IPR001005 -
Ahy17g3189 318 PANTHER MYB DNA-BINDING DOMAIN SUPERFAMILY PROTEIN-RELATED 1 169 - -
Ahy17g3189 318 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Ahy17g3189 318 MobiDBLite consensus disorder prediction 136 156 - -
Ahy17g3189 318 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Ahy17g3189 318 MobiDBLite consensus disorder prediction 116 156 - -
Ahy17g3189 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Ahy17g3189 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3189 Ahy-Chr17 133839606 133841529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3189 1 122 MYB Transcription Factor Family AT3G49690 90.984 7.80e-82 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy17g3189 Myb_DNA-binding 2.50E-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3189 K09422 - gmx:778079 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3189 17 133839606 133841529 Ahy17g3189 17 133839606 133841529 ECH
Ahy17g3189 17 133839606 133841529 Ahy8g0899 8 17391975 17393770 hybridization
Ahy16g3396 16 150997104 150999289 Ahy17g3189 17 133839606 133841529 PCT
Ahy6g2659 6 111996204 111998222 Ahy17g3189 17 133839606 133841529 PCT
Ahy17g3189 17 133839606 133841529 Ahy16g3396 16 150997104 150999289 PCT
Ahy17g3189 17 133839606 133841529 Ahy6g2659 6 111996204 111998222 PCT