Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3184 ATGAGATGCAGTGGCAGTGATGGGACTTGCCCCTCCCTTGGTCAGATCATGGAGGGAAAACACTCTGTTCCAAGTATGACCAAGCCTACTAATATCATACAAAATCATGACTTCTCTGAAGGGCTAAGCTTTTGGCATCCGAATGGCTGCGACGGCTATGTTGCTTCAACTGAACCAGGTCCTCAAGGAGGAGTGACAATGACATTAGGTGCTAAATATGCTGTTATCACAAACAGAAAGGAATGGTGGCAAGGTCTTGAGCAAGATATCACCGGAAAAGTCTCTGTCGCTTCCACTTATGCTGTTTCGGCCAATGTTGGAGTAGCTGCACTTTCTGAGGGATCTGCTGATGTTCTAGCTACCCTGAAACTAGAGTATCATGGTTCTGATGCAAGCTACCTGTTCCTTGGGAGAACTTCTTGTACAAAGGGTAGCTGGGAAAATCTGAAAGGGACATTTTCATTGTCAACTATGCCTGATCGAGTTACATTTTATTTGGAAGGACCTGCTCCTGGAGTTGACCTTCTTATACAATCAGTAGAGATTACCTGCTCTAGTTCAAGTGATATTGAGGATCATGCAAAAACAACAGGAACTTTGTCAACTGAAGATGATAACATCATAATAAACCCACAATTTGATGATGGCCAGAATAACTGGTCTGGAAGAGGCTGCAAGATCGCAATACATGACTCACTGGGAAATGGAAAAGTCCTTCCCAAGGTTGGAAAATTCTTTGCAGCTGCAACAGAACGCACCCAAAGCTGGAATGGAATTCAGCAGGACATTACCGGACGGGTGCAGCGTAAGCTCGCCTATGAACTCTCTGCTTTGGTTCGGATATTTGGAGGCAATGTCACTTCTTCTGATGTCCGCGCAACTTTATGGGTTCAGAATCCGGATTCTCGAGAGCAGTATATAGGAATTGCCAATGTGCAGGCAACAAATCAAGATTGGGTTCAATTGCAGGGAAAGTTCCTTATAAATAATTCCCCATCAAAAGTGGTTGTTTATTTAGAAGGTCCCCCAGCAGGCATTGACATTCTTGTCAATACTATTGTTATAAAACATGCTCCCAAGACAGCTCCATCAACGCCACCAGATTTTGAGGATGCTCCTTTTGGGATTAATATAATTGAGAATAGTAATCTGGCTAATGGCACCAATGGATGGTTTCCCCTTGGTAATTGTACTCTGAGTGTTGGAACCGGTTCGCCACGTGTGCTTCCACCAATGGCAAGAGACTCTCTTGGACCTCACGAGTCGTTGAGTGGCCGCTATGTCCTTGTAACGAACCGCACCCAAACATGGATGGGGCCTGCTCAGATGATCACTGAGAAATTGAAGCTGTTCTTAACATACCAAGTGTCTGCTTGGGTGAGGATTGGTTCAACAGGATCAGTTGGTCCTCAGAATGTGAATGTTGCCCTTAGTGTTGACGATCAGTGGGTGAATGGAGGACAAGTTGAGGTTGCTGATGACAGATGGCATGAAATTGGTGGATCATTTAGAATTGAGAAGCAACCATCAAAGGTTATGGTTTATATTCAAGGTCCTGCTTCTGGTGTTGATTTGATGATTTCTGGACTTCAAATCTTCCCTGTTGATAGACAAGCAAGGTTTAGATATTTAAGGAGGCAGACAGACAAGGTTCGAAAGCGCGATGTAATCTTGAAATTCTCTGGGCTGGAGGACATAAGTGGTCTAGGAACTTTGGTTAAAGTGAGGCAAATACAGAACGATTTTCCAATTGGAACATGCATCAACAGAACAAACATTGACAATGAAGACTTTGTTGACTTCTTTGTGAAGCATTTTAACTGGGCTGTGTTTGGGAATGAGTTGAAGTGGTATTGGACAGAACCACAACAGGGGAATATCAACTACAAAGATGCTGATGAAATGTTAGACTTATGCCTCAAGAACAAGATAGAAACCCGCGGCCACTGCATCTTCTGGGAAGTAGAAGGCACAGTTCAGCAGTGGATCAAATCACTGAACAAAGACGATTTGATGAAAGCAGTCCAAAATCGGTTAAGCAGCCTCTTGAATCGGTACAAGGGCAAGTTCAGGCACTATGATGTTAACAATGAAATGCTGCATGGTTCATTTTATCAAGACAGGCTTGGTAGAGACATAAGAGCAAACATGTTCAAGGCAGCACACCAATTAGACCCATCTGCTACTCTCTTTGTGAATGATTATCACATTGAAGATGGAAACGACACAAGATCAACACCAGAGAAATACATTCAACAGATTCTTGATTTGCAACATCAAGGTGCACCAGTTGGTGGAATTGGAATTCAAGGACACATAGATAGTCCTGTGGGGCCTATTGTTTGTTCTGCACTTGATAAATTAGGGACTCTTGGTTTACCAATATGGTTCACTGAGCTTGATGTTTCTTCAAGAAATGAGTATGTTAGAGCTGATGATTTGGAAGTTATGATGAGGGAAGCCATGGCACACCCTTCAGTAGATGGCATAATGCTGTGGGGATTCTGGGAATTGTTTATGAGCAGAGAGAATTCACACTTGGTGAATGCAGAAGGTGATGTTAATGAAGCTGGAAAAAGGTTACTTTGTCTTAAACAAGAGTGGTTGTCTCATAGCCATGGCTGTATTGATGATCAAGGGATATTCAGCTTCAGAGGCTTCAGTGGAACATACAATGTTGAAGTTGTAACATTATCTAAGATTGTTTCAAAGACATTTGTTGTTGATAAAGGTGACTCTCCTTTGGAGGTAGAGGTATCCTTTAACTAG 2769 0.4276 MRCSGSDGTCPSLGQIMEGKHSVPSMTKPTNIIQNHDFSEGLSFWHPNGCDGYVASTEPGPQGGVTMTLGAKYAVITNRKEWWQGLEQDITGKVSVASTYAVSANVGVAALSEGSADVLATLKLEYHGSDASYLFLGRTSCTKGSWENLKGTFSLSTMPDRVTFYLEGPAPGVDLLIQSVEITCSSSSDIEDHAKTTGTLSTEDDNIIINPQFDDGQNNWSGRGCKIAIHDSLGNGKVLPKVGKFFAAATERTQSWNGIQQDITGRVQRKLAYELSALVRIFGGNVTSSDVRATLWVQNPDSREQYIGIANVQATNQDWVQLQGKFLINNSPSKVVVYLEGPPAGIDILVNTIVIKHAPKTAPSTPPDFEDAPFGINIIENSNLANGTNGWFPLGNCTLSVGTGSPRVLPPMARDSLGPHESLSGRYVLVTNRTQTWMGPAQMITEKLKLFLTYQVSAWVRIGSTGSVGPQNVNVALSVDDQWVNGGQVEVADDRWHEIGGSFRIEKQPSKVMVYIQGPASGVDLMISGLQIFPVDRQARFRYLRRQTDKVRKRDVILKFSGLEDISGLGTLVKVRQIQNDFPIGTCINRTNIDNEDFVDFFVKHFNWAVFGNELKWYWTEPQQGNINYKDADEMLDLCLKNKIETRGHCIFWEVEGTVQQWIKSLNKDDLMKAVQNRLSSLLNRYKGKFRHYDVNNEMLHGSFYQDRLGRDIRANMFKAAHQLDPSATLFVNDYHIEDGNDTRSTPEKYIQQILDLQHQGAPVGGIGIQGHIDSPVGPIVCSALDKLGTLGLPIWFTELDVSSRNEYVRADDLEVMMREAMAHPSVDGIMLWGFWELFMSRENSHLVNAEGDVNEAGKRLLCLKQEWLSHSHGCIDDQGIFSFRGFSGTYNVEVVTLSKIVSKTFVVDKGDSPLEVEVSFN* 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3184 922 SUPERFAMILY Galactose-binding domain-like 375 536 IPR008979 -
Ahy17g3184 922 ProSitePatterns Glycosyl hydrolases family 10 (GH10) active site. 792 802 IPR031158 -
Ahy17g3184 922 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 569 864 IPR001000 GO:0004553|GO:0005975
Ahy17g3184 922 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE PROTEIN 194 919 - -
Ahy17g3184 922 SMART glyco_10 615 865 IPR001000 GO:0004553|GO:0005975
Ahy17g3184 922 PRINTS Glycosyl hydrolase family 10 signature 728 739 IPR001000 GO:0004553|GO:0005975
Ahy17g3184 922 PRINTS Glycosyl hydrolase family 10 signature 646 658 IPR001000 GO:0004553|GO:0005975
Ahy17g3184 922 PRINTS Glycosyl hydrolase family 10 signature 760 772 IPR001000 GO:0004553|GO:0005975
Ahy17g3184 922 Pfam Glycosyl hydrolase family 10 578 835 IPR001000 GO:0004553|GO:0005975
Ahy17g3184 922 Pfam Carbohydrate binding domain 377 521 IPR003305 GO:0016798
Ahy17g3184 922 Pfam Carbohydrate binding domain 205 342 IPR003305 GO:0016798
Ahy17g3184 922 Pfam Carbohydrate binding domain 31 171 IPR003305 GO:0016798
Ahy17g3184 922 Coils Coil 847 867 - -
Ahy17g3184 922 Gene3D - 374 533 - -
Ahy17g3184 922 Gene3D - 25 184 - -
Ahy17g3184 922 Gene3D - 200 357 - -
Ahy17g3184 922 PANTHER GLYCOSYL HYDROLASE 194 919 IPR044846 GO:0004553|GO:0005975
Ahy17g3184 922 PANTHER GLYCOSYL HYDROLASE 26 183 IPR044846 GO:0004553|GO:0005975
Ahy17g3184 922 SUPERFAMILY (Trans)glycosidases 573 872 IPR017853 -
Ahy17g3184 922 Gene3D Glycosidases 569 871 - -
Ahy17g3184 922 SUPERFAMILY Galactose-binding domain-like 29 185 IPR008979 -
Ahy17g3184 922 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE PROTEIN 26 183 - -
Ahy17g3184 922 SUPERFAMILY Galactose-binding domain-like 204 360 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3184 Ahy-Chr17 133696011 133706381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g3184 30 921 Glycoside Hydrolase AT1G58370 66.927 0.0 1272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3184 - - lja:Lj0g3v0316669.1 1456.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3184 17 133696011 133706381 Ahy8g0893 8 17254573 17265356 hybridization
Ahy16g3392 16 150874061 150879457 Ahy17g3184 17 133696011 133706381 PCT
Ahy6g2655 6 111862672 111868134 Ahy17g3184 17 133696011 133706381 PCT
Ahy17g3184 17 133696011 133706381 Ahy16g3392 16 150874061 150879457 PCT
Ahy17g3184 17 133696011 133706381 Ahy6g2655 6 111862672 111868134 PCT