Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3424 ATGGGCGAAATCTACAAAATCAACTCAATAAATTGGAAACCCTCTCCGGTAATCGCTCTTGCCACCAGCGTCGACGGCCTCCGTGTAGCCGCAGCTCGCCAAGACGGTTCCCTTGAACTCTGGCTCGTATCTCCCGGCTCCATTGGCTGGCACTGTCAACTTACGATTCATGGTGACCCTACTACAAGAGTATCTTCGCTTCTTTGGTGCCCTGGCGGCTCCAATGGCATGCCGTGCGGTCGTTTATTTTCGTCTAACATTGATGGTTCAGTTTCCAAGTGGGATCTTTTCCACCTGAAGCAAACGACTGTGCTTGATTCAGATGGTGTTTGCATTTGGCAAATGGCTGTTACGTTCCCTAAGGTTGATTTAGTTAATAATGTGCCTAATGGTGATGTTATGGGGAATGGTTATGCCAGTAAAATTCAAGAATCTGATGAACAAGAGAGCAGCGATAGTGACGAAGATAATGACTCACCTGATGCTGGCAAGCAATCTGTTCTTGAGTCTCCACGTGTAGCAATTGGTTATGATGATGGAAGTGTGAGGATTTATGCCGTATCTGATGAAGATGAATTCCTATATGTAAAATCATTGCCTCGGGTCAAAGGACGAGTTTTAAGTGTGACTTGGAGCACTGATGCTAACTACATATACTCCGGAAGTAGTGATGGGTTAATACGATGCTGGGATGCTACGTCTAGTCATGAAGTTTATAGGATTACGGCTGGGCTTGGAGGTTTGGGTGGCGGACATGAACTTTGCATATGGTCGTTACTGTCTTTAAGGTCTGGGACGCTTGTTAGTGCAGACAGCAGTGGCAGTGTCCAATTTTGGGATAGTAAACATGGAACTCTCTTGCAAGCACATTCATTGCACAAGGGTGATGTAAATGCTTTGGCTGCATCCCCAAGTCATGATAGGGTGTTCTCGGCTGGTTCTGATGGCCAGGTTATTCTCTATAAGCTGTCTAGCCAGTCAGCATCTTCCGACAGTGTCAACCCCACTGTGATGACAAAGAAATGGATCTATGTTCACTATGTTAGGTCTCATACACATGATGTCAAGGCCTTGACTGTTGCTGTGCCGATATCTCAAGAAGCAGATTCTCTGCCAGAAGAGAGGAATAAAAGACGTCGGCTTGAAGGAAAGCCTGTTGATTTAAATTATCATAAATGGTCCCAATTTGGGGTTCCCATGCTTATCTCAGCAGGAGATGACACAAAACTATTTGCATACCCGGTAAAGGAATTCACTAAGTTTTCTCCTCATGATATTTGTCCTGCGCCTCAGAGAACCCCAGTTCAACTAGTGCTTAATACTGCCTTCAATCAATCATCAATGCTTTTAGTCCAGTCTAGGCAATGGTTAGATGTACATTTACTACATCTTGGAAATGTTCGTACAGCTGGATGCTTTACTAAGACTGAAATCCTTGCACGAGTGAAGACTAAGGAATCTCGGAAGATTGCTTGCAGCACAATTGCTAATTCTGGGGAGCATTTTGCATACTCTGATAATGCAAGGCCTAGTCTGTTTGAGTTAAAGAGGAGTGGAGTTGGAAAGATTACATGGAGCGTGAGTAGAAAGAAGCTTCCCCCGAGGTTACCCTTTGCCCATTCAATGATTTTCACCCATGAGTCATCCTGGTTGATACTAGCTGGCCATGATAGGAGGATATATGTTGTGGATGTCAGCACATCGGAACTAGTGCATGCTTTTACACCCTGTCGGGAGCTGGATGACGAGAAATTGCCTCCGAAGGAACCTCCCATTACTAGATTATTTACCAGTTCCGACAGGCAGTGGCTGGCAGCTGTTAACTGCTTTGGCGATATATATGTGTTTAACTTGGAGACACTAAGGCAGCACTGGTTCATCTCAAGATTAGATGGTGCCTCTGTCACGGCTGGTGGGTTTCCTCCCCAGAACAACAATGTAATGATAGTTACAACTTCTTCGAATCAAGTGTATGCATTTGACGTGGAGGCCAAGCAATTGGGAGAATGGTCGATGAGGAATACATATGTTCTTCCCCGGAGATTCCAGGAGTTTCCCGGCGAAGTCATTGGGCTTTCATTTCCTCCCTCATCAACTTCATCATCAGTTGTTATTTATAGCTCCAGGGCAATGTGCTTGATTGATTTTGGATTACCGGTGGAGCAAGACGAAAGCGATATGCTAAATGCTCAAGAATCATTGGCCAAGAACTTGCAACAAAACTTTACTAATGTTAAGAAGAGGACAAAATTTAGGAGAAACTTTGACGTATTTTCATTAGATAACCCAGTTTTATTTTTAGCTCATGTCTCAAAAAATTCCTTCTTTATGGTAGAAAAGCCATGGCTGGAAGTGGTTAAAAGACTAGAAGCCCCACCAGTTCATAAACATATTTTTGGCACCTAA 2406 0.4406 MGEIYKINSINWKPSPVIALATSVDGLRVAAARQDGSLELWLVSPGSIGWHCQLTIHGDPTTRVSSLLWCPGGSNGMPCGRLFSSNIDGSVSKWDLFHLKQTTVLDSDGVCIWQMAVTFPKVDLVNNVPNGDVMGNGYASKIQESDEQESSDSDEDNDSPDAGKQSVLESPRVAIGYDDGSVRIYAVSDEDEFLYVKSLPRVKGRVLSVTWSTDANYIYSGSSDGLIRCWDATSSHEVYRITAGLGGLGGGHELCIWSLLSLRSGTLVSADSSGSVQFWDSKHGTLLQAHSLHKGDVNALAASPSHDRVFSAGSDGQVILYKLSSQSASSDSVNPTVMTKKWIYVHYVRSHTHDVKALTVAVPISQEADSLPEERNKRRRLEGKPVDLNYHKWSQFGVPMLISAGDDTKLFAYPVKEFTKFSPHDICPAPQRTPVQLVLNTAFNQSSMLLVQSRQWLDVHLLHLGNVRTAGCFTKTEILARVKTKESRKIACSTIANSGEHFAYSDNARPSLFELKRSGVGKITWSVSRKKLPPRLPFAHSMIFTHESSWLILAGHDRRIYVVDVSTSELVHAFTPCRELDDEKLPPKEPPITRLFTSSDRQWLAAVNCFGDIYVFNLETLRQHWFISRLDGASVTAGGFPPQNNNVMIVTTSSNQVYAFDVEAKQLGEWSMRNTYVLPRRFQEFPGEVIGLSFPPSSTSSSVVIYSSRAMCLIDFGLPVEQDESDMLNAQESLAKNLQQNFTNVKKRTKFRRNFDVFSLDNPVLFLAHVSKNSFFMVEKPWLEVVKRLEAPPVHKHIFGT* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3424 801 Gene3D - 4 152 IPR015943 GO:0005515
Ahy16g3424 801 Gene3D - 162 451 IPR015943 GO:0005515
Ahy16g3424 801 Pfam WD domain, G-beta repeat 206 231 IPR001680 GO:0005515
Ahy16g3424 801 Pfam WD domain, G-beta repeat 293 321 IPR001680 GO:0005515
Ahy16g3424 801 ProSiteProfiles Trp-Asp (WD) repeats profile. 290 331 IPR001680 GO:0005515
Ahy16g3424 801 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 14 622 IPR011047 -
Ahy16g3424 801 ProSiteProfiles Trp-Asp (WD) repeats profile. 199 240 IPR001680 GO:0005515
Ahy16g3424 801 SUPERFAMILY WD40 repeat-like 381 694 IPR036322 GO:0005515
Ahy16g3424 801 SMART WD40_4 283 322 IPR001680 GO:0005515
Ahy16g3424 801 SMART WD40_4 529 564 IPR001680 GO:0005515
Ahy16g3424 801 SMART WD40_4 3 42 IPR001680 GO:0005515
Ahy16g3424 801 SMART WD40_4 192 231 IPR001680 GO:0005515
Ahy16g3424 801 SMART WD40_4 49 95 IPR001680 GO:0005515
Ahy16g3424 801 SMART WD40_4 234 280 IPR001680 GO:0005515
Ahy16g3424 801 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 199 234 - -
Ahy16g3424 801 MobiDBLite consensus disorder prediction 143 165 - -
Ahy16g3424 801 Coils Coil 728 748 - -
Ahy16g3424 801 Gene3D - 517 717 IPR015943 GO:0005515
Ahy16g3424 801 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 801 IPR044622 GO:0010073|GO:0035266
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3424 Ahy-Chr16 151455377 151461497 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3424 K14548 - gmx:100797494 1139.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3424 16 151455377 151461497 Ahy16g3424 16 151455377 151461497 ECH
Ahy16g3424 16 151455377 151461497 Ahy6g2687 6 112373165 112378531 hybridization