Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3413 ATGTTGGACTACCTACAACTCATTCACCCTCAAACGCGCAGAGAGAGAAAGAGAGAGAGAGAGAGAGTGAAAGAGGACCCTAATTCCGCAAACAGAACGAGAAGATTCTCTCTCGCAGTCCCAGCAATTCTTCTGGTAACGCAATCAAACCAATCGGATTATACTGTTAAAATGGCCAATAATTCTCAGCCCCCTGGTATGCAGTTTCGGCCAGTCATTCAGGCCCAGCAAGGTCAGCCATTTGCTCCAATGGCTTCCCAACAATTTGGACTTGCAGGACATGCTATTCCTTCTTCAAATGTTGCAATGCCTGTTGGTCAGAGTCAGCAATTGCAGTATTCACAACCAATGCAGCAGTTGCCTCCAAGACATATTCAGCCTGGTCAACCTGCACCTTCGTCGCAGGTTATACCTATGCAATATATCCAAACAAATAGACCCCCGACATCCGTCCCACCACATTCACAGCCAACTGTTCCCCACTTAAGCAGTCATATGCCCAGCTTGGCTGTTTCAGCAGCAACTTCTCATTCTTCATATACTTTTCAACCACCGTATAGTCAGCAGCAGGATAATGTTAATGCAATGGCTCAGTACCAGCAATCGGGCCAAATGCATGCTCCTCCGGCTGGACAACCTTGGGTGTCCTCTGTTTCTCAGAGTGCTGCAACTGTTACACCAGTGCAACAGGCTGGAGTGCAATCATCTGGTACTCCGTCAACTGATTCTGCAACAAGTGCCCCTAACCAGCAGTCAGCATCTGATTGGCAAGAGCATACTGCAGCTGATGGCAGAAGATATTACTACAACAAGAGGACAAGGCAATCTAGTTGGGAGAAACCATTGGAACTGATGTCACCTATTGAGAGGGCTGATGCATCAACTGTTTGGAAAGAATTCACATCTTCAGATGGAAGAAAGTATTATTACAACAAGGTTACTCAGCAATCAACATGGTCAATACCAGAGGAACTTAAGTTGGCTCGTGAATTGGCGCTGAAAGCTGCCAATCAGGGAATGCAGTTAGAAACAAGTGATACATCGAATACTGCTGTTTCATCTGCTGCACCATCAACAGTGACTAATACTGCTAGCTCAAACACTCCTTTGACATCAAATGGGCTTGCTTCAAGTCCAGCATCTGTCACACCAATTGCATCGTCAACTGGTCCTCAGCAGTTGGTTTCTGGATTATCAAGTACCACTGGGACTGAACTGAGTACTGTGGTAACTGCGTCTACGGCAGTAGCTGGACCTGCAAATCCTCTTGACACCACTACACCGTCCAGTGTTGAAAATCAAGCATCTCAGGATTTTGCTGCTCCTACCGGTGGAGCTTCTGTTAAAGATATAGAGGAAACCAAAAAAGGATTGCCAGTTGCTGGAAAAGTTAATGTGACTCTGCCAGAGGAGAAAGCAAATGATAAAGAAACCTTTGCATATGCAAATAAGATGGAAGCAAAAATTGCATTTAAGGCACTATTGGAGTCTGCTAATGTTCAGTCTGATTGGACATGGGAACAGGCGATGAGAGAAATAATCAATGACAAAAGATACAATGCTCTAAAAACACTTGGTGAGCGGAAACAAGCTTTTAATGAGTATTTGGGCCAAAGGAAGAAGCTAGAGGCTGAAGAGAGACGCATGAAGCAGAAAAAAGCTCGAGAAGAATTCACAAAGATGTTGGAAGAGTGCAAGGAGCTAACTTCATCCATGAGATGGAGCAAAGCAATCAATATGTTTGAAAATGATGAGCGGTTCAATGCTGTTGACAAAATGAGGGACAGGGAAGATTTATTTGAGAGCTACATGGTGGAACTCGAGAGAAAGGAAAAGGAAAATGCTGCTGAGGAACACAGACGGAATTTAGCAGAATACAGGAAATTCTTGGAGTCATGTGATTATGTGAAGGTTCACAGTCCATGGCGAAAAGTCCAAGATCGGTTAGAGGACGATGATAGATATTTACGGCTTGAAAAAATTGACCGCTTGCTTGTTTTCCAGGACTATATTCGTGAATTGGAAAAGGAAGAAGAGGAGCAAAAACGAGTACAGAAGGAGCGAGTTCGTCGTGGTGAAAGGAAAAATCGTGATGCATTCCGCAAGTTGTTGGAAGAACATGTTGCTGCTGGAATTCTTAATGCTAAAACTCAATGGAGAGAATACTGCTTGAAGGTTAGGGATTTGCCTCAATATCAAGCTGTCGCATCAAACACATCTGGTTCCACTCCTAAGGATTTATTTGAGGATGTAGTAGAAGATCTTGAAAATCAGTACCATGAAGACAAGACACTGGTAAAAGATATAATTAAGTCAGGCAAGATCACTGTAGTGTCCACTTCGGTGTTTGAGGAATTCAAGGCTGCTATCTTGGAAGAAGCTAGTTGCGAAACAATATCAGAGATCAATTTGAAGCTTATATTCGAAGACTTGTTAGAGAGAGCTAAAGAGAAAGAGGAGAAAGAAGCTAAGAAGCGCCAGCGCCTTGCTGATGACTTAACTAACCTGTTATATACATTTAAGGATATTACTACTTCTTCAACTTGGGAGGATTGCAAGCCACTTGTTGAGGAGACACAAGAGTACAGATCAATGGGGGATGAAAACTACAGTAGAGAAGTATTTGAGGAGTACATTACATACCTAAAGGAAAAAGCTAAAGAGAAGGAACGCAAGCGTGAAGAGGAAAAGGCCAGAAAGGAGAAAGAGAGAGAAGAGAAAGAGAAACGGAAGGAGAAGGAAAAGGAAAAGAAAGAGAAGGATAGAGAACGCGAGAAAGAAAAGTCTAAAGATCGGCATAAGAAGGACGACACAGATAGTGAAAACCAAGATATTGAAAGCCATGGTTTCAAGGAAGAGAAGAAAAAAGACAAAGATAAGGAAAGGAAACACAGGAAGAGGCGACACAGCAGTGTAGAGGATGTGGATTCCGAGAGGGATGAAAAAGAAGAGTCTAAGAAATCACGAAAGCACGGCAGCGACCGAAAGAAATCTCGAAAGCATGCAAACTCTCCAGAATCAGACAATGAAACCCGGCATAGAAGACACAAGAGGGAGCACCGTGATGGTTCCCGGAAAACCGGGGGCCATGAAGAACTTGAAGACGGGGAACTCGGCGATGATGCAGAGATTTAG 3135 0.4357 MLDYLQLIHPQTRRERKRERERVKEDPNSANRTRRFSLAVPAILLVTQSNQSDYTVKMANNSQPPGMQFRPVIQAQQGQPFAPMASQQFGLAGHAIPSSNVAMPVGQSQQLQYSQPMQQLPPRHIQPGQPAPSSQVIPMQYIQTNRPPTSVPPHSQPTVPHLSSHMPSLAVSAATSHSSYTFQPPYSQQQDNVNAMAQYQQSGQMHAPPAGQPWVSSVSQSAATVTPVQQAGVQSSGTPSTDSATSAPNQQSASDWQEHTAADGRRYYYNKRTRQSSWEKPLELMSPIERADASTVWKEFTSSDGRKYYYNKVTQQSTWSIPEELKLARELALKAANQGMQLETSDTSNTAVSSAAPSTVTNTASSNTPLTSNGLASSPASVTPIASSTGPQQLVSGLSSTTGTELSTVVTASTAVAGPANPLDTTTPSSVENQASQDFAAPTGGASVKDIEETKKGLPVAGKVNVTLPEEKANDKETFAYANKMEAKIAFKALLESANVQSDWTWEQAMREIINDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRMKQKKAREEFTKMLEECKELTSSMRWSKAINMFENDERFNAVDKMRDREDLFESYMVELERKEKENAAEEHRRNLAEYRKFLESCDYVKVHSPWRKVQDRLEDDDRYLRLEKIDRLLVFQDYIRELEKEEEEQKRVQKERVRRGERKNRDAFRKLLEEHVAAGILNAKTQWREYCLKVRDLPQYQAVASNTSGSTPKDLFEDVVEDLENQYHEDKTLVKDIIKSGKITVVSTSVFEEFKAAILEEASCETISEINLKLIFEDLLERAKEKEEKEAKKRQRLADDLTNLLYTFKDITTSSTWEDCKPLVEETQEYRSMGDENYSREVFEEYITYLKEKAKEKERKREEEKARKEKEREEKEKRKEKEKEKKEKDREREKEKSKDRHKKDDTDSENQDIESHGFKEEKKKDKDKERKHRKRRHSSVEDVDSERDEKEESKKSRKHGSDRKKSRKHANSPESDNETRHRRHKREHRDGSRKTGGHEELEDGELGDDAEI* 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3413 1044 SUPERFAMILY FF domain 476 538 IPR036517 -
Ahy16g3413 1044 Gene3D FF domain 821 894 IPR036517 -
Ahy16g3413 1044 MobiDBLite consensus disorder prediction 199 258 - -
Ahy16g3413 1044 MobiDBLite consensus disorder prediction 417 447 - -
Ahy16g3413 1044 Gene3D - 249 292 - -
Ahy16g3413 1044 Gene3D - 293 334 - -
Ahy16g3413 1044 ProSiteProfiles FF domain profile. 484 538 IPR002713 -
Ahy16g3413 1044 MobiDBLite consensus disorder prediction 9 31 - -
Ahy16g3413 1044 Coils Coil 808 836 - -
Ahy16g3413 1044 Coils Coil 600 629 - -
Ahy16g3413 1044 Pfam WW domain 254 281 IPR001202 GO:0005515
Ahy16g3413 1044 Pfam WW domain 297 322 IPR001202 GO:0005515
Ahy16g3413 1044 ProSiteProfiles FF domain profile. 691 754 IPR002713 -
Ahy16g3413 1044 SUPERFAMILY FF domain 827 888 IPR036517 -
Ahy16g3413 1044 MobiDBLite consensus disorder prediction 199 259 - -
Ahy16g3413 1044 ProSitePatterns WW/rsp5/WWP domain signature. 256 281 IPR001202 GO:0005515
Ahy16g3413 1044 Coils Coil 879 930 - -
Ahy16g3413 1044 SUPERFAMILY FF domain 686 761 IPR036517 -
Ahy16g3413 1044 PANTHER PRE-MRNA-PROCESSING PROTEIN PRP40 60 1039 IPR039726 GO:0045292
Ahy16g3413 1044 MobiDBLite consensus disorder prediction 9 33 - -
Ahy16g3413 1044 Gene3D FF domain 484 539 IPR036517 -
Ahy16g3413 1044 ProSiteProfiles WW/rsp5/WWP domain profile. 291 324 IPR001202 GO:0005515
Ahy16g3413 1044 ProSitePatterns WW/rsp5/WWP domain signature. 297 322 IPR001202 GO:0005515
Ahy16g3413 1044 CDD WW 297 324 IPR001202 GO:0005515
Ahy16g3413 1044 CDD WW 254 283 IPR001202 GO:0005515
Ahy16g3413 1044 MobiDBLite consensus disorder prediction 889 1044 - -
Ahy16g3413 1044 ProSiteProfiles FF domain profile. 619 673 IPR002713 -
Ahy16g3413 1044 SUPERFAMILY FF domain 545 613 IPR036517 -
Ahy16g3413 1044 Pfam FF domain 622 670 IPR002713 -
Ahy16g3413 1044 Pfam FF domain 486 535 IPR002713 -
Ahy16g3413 1044 Pfam FF domain 695 750 IPR002713 -
Ahy16g3413 1044 Pfam FF domain 553 603 IPR002713 -
Ahy16g3413 1044 MobiDBLite consensus disorder prediction 342 400 - -
Ahy16g3413 1044 MobiDBLite consensus disorder prediction 968 990 - -
Ahy16g3413 1044 MobiDBLite consensus disorder prediction 999 1015 - -
Ahy16g3413 1044 SUPERFAMILY WW domain 284 325 IPR036020 GO:0005515
Ahy16g3413 1044 MobiDBLite consensus disorder prediction 417 441 - -
Ahy16g3413 1044 Coils Coil 667 687 - -
Ahy16g3413 1044 Gene3D FF domain 684 765 IPR036517 -
Ahy16g3413 1044 Gene3D FF domain 615 683 IPR036517 -
Ahy16g3413 1044 Gene3D FF domain 540 614 IPR036517 -
Ahy16g3413 1044 SUPERFAMILY FF domain 611 680 IPR036517 -
Ahy16g3413 1044 SMART ww_5 292 324 IPR001202 GO:0005515
Ahy16g3413 1044 SMART ww_5 251 283 IPR001202 GO:0005515
Ahy16g3413 1044 MobiDBLite consensus disorder prediction 144 164 - -
Ahy16g3413 1044 SMART FF_2 826 881 IPR002713 -
Ahy16g3413 1044 SMART FF_2 693 754 IPR002713 -
Ahy16g3413 1044 SMART FF_2 551 606 IPR002713 -
Ahy16g3413 1044 SMART FF_2 484 538 IPR002713 -
Ahy16g3413 1044 SMART FF_2 619 673 IPR002713 -
Ahy16g3413 1044 ProSiteProfiles WW/rsp5/WWP domain profile. 250 283 IPR001202 GO:0005515
Ahy16g3413 1044 PANTHER PRE-MRNA-PROCESSING PROTEIN 40B 60 1039 - -
Ahy16g3413 1044 MobiDBLite consensus disorder prediction 889 959 - -
Ahy16g3413 1044 Coils Coil 532 555 - -
Ahy16g3413 1044 ProSiteProfiles FF domain profile. 551 606 IPR002713 -
Ahy16g3413 1044 SUPERFAMILY WW domain 255 289 IPR036020 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3413 Ahy-Chr16 151275182 151284593 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3413 K12821 - gmx:100806019 1331.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3413 16 151275182 151284593 Ahy16g3413 16 151275182 151284593 ECH
Ahy16g3413 16 151275182 151284593 Ahy6g2678 6 112231678 112241064 hybridization