Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3411 ATGGATCTTGGTGTGGTGGGTTTTGATGGGTTGGTGGGTTCAGAAGCTGGGTTTGTTCCATTTGGATCTGGGTTCCTTAAGCATCAAAGATCTGAACAAGAAGAGGAGGTGAGTAATATTAATGATCATAATAATAGAAGAGGGGCAAAACTGTCAAAGGTTAATATTACTAGTGGTGATGATGATCATGATGATGTCATCACAACAACAACATCAAAGGGAATGTTGTTTTTTCAGAATCATCAGAGGAACAACAACAACAATAGCTCTTGTTGTAATGTGTTGTTGAGATCTAATAATAATAATAATAATAATAATGGAAATGACAATGTTGCCATTGCTCTCTTCAATGATGGTGGTGAAGAACAAGAAGGAGAAGAGAAGATGCTGAGTTTCTCAACAACACCAACACCAAAGTCAGAGTCTTTGATTGTGGAAAAGGCTTCCTCAAATGCTACATTGCACACTTCTTATCACCCTTTCTCTAGTTACAACATAAATAATGCAGGTTACAATAACAGTAATTGGGGAATGAACGTGAACGTGAACATGAACATGATGAATAATAATGTGGGAAGAGTGGTAGGAGCTGCATTATTCACTCCCTCACAGTGGATGGAGCTGGAGCACCAAGCACTCATTTATAAGTATATCACTGCAAATGTTCCTGTTCCTTCTCATCTTCTTATTCCAATCAGAAAAGCCCTTCACTCCACTTCTCCATTCTCTAACTTTCCTAATCCACTTCTTAGACCCAATCCTTTGGGATGGGGAGGTTTCCATCTGGGATTCTCGAGCAGCACCGATCCGGAGCCGGGTCGGTGCAGGAGAACCGATGGGAAGAAATGGCGGTGCTCGAGGGACGCAGTTGTGGACCAGAAGTACTGCGAGCGTCACATGAACCGAGGCCGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCTGCTGCCGTCACCACCACCACCACCACCACAACCACCACTTCTAACTCAAAGCTATTGTTGCCTAACAGCAACAATTCAAGTTCTTCATTTTCCATTGTGGGGAACACTGCTTCCAACAACAACAGCAACACTATTTCATTTGGAAACTGCCATGAACACAAGAATGTTATTCAGCAGCAGCAGCCTGTTGCATCTGATGCTTCTGCTGCCAATAATATCAGCAGGATGTTTATGAAGAAAGAGAACAATAATGCAAATGAGAGTTGTTCATCACTACTTCCAATGCTACCACCAAACCTTGATCTGAAACCAAAGGAAAACCCATTCATGATTCATAACAACAACCATGAATTTGGAGTTGTGACTTGTGATTCACTCCTTAACCCTTCTTCCAATAATAAGAGCAATGATTCACAAAACAATTCCCTAAGGCATTTCATTGATGAGTCAACACAATTGTCAATCTCAATCCCAAATCATCAATTCATGCCAACCAATGAGAAAGTGACACTCTCACCTTTGAGGGTATCATCATCAAGGGAGTTGGAATTGGAATTGGTAGACCCTATTCAAATGGGGTTAGGAGTTGGAATTGGTGTCAACAACAACATTGTTAGACAACCAAATTGGATTCCAATTTCATGGGAGAGTTCAATGGGTGGTCCACTTGGTGAGGTTCTCAACCTTAATAATAATAATAATAGTAATAACAATAATAAGGGTTCTATGAACCTTATTAGTAGTGATGGTTGGGACAATAGTCCTTCAATAGGGTCATCACCTACTGGGGTGTTGCAAAAGACAACAGCATTTGGTTCACTCTCTAATAGCAGTGCTGGGAGTAGTCCAAGGGCAGCAGACAACAACAAAGGAGGGGCAATCTTGTAA 1842 0.4153 MDLGVVGFDGLVGSEAGFVPFGSGFLKHQRSEQEEEVSNINDHNNRRGAKLSKVNITSGDDDHDDVITTTTSKGMLFFQNHQRNNNNNSSCCNVLLRSNNNNNNNNGNDNVAIALFNDGGEEQEGEEKMLSFSTTPTPKSESLIVEKASSNATLHTSYHPFSSYNINNAGYNNSNWGMNVNVNMNMMNNNVGRVVGAALFTPSQWMELEHQALIYKYITANVPVPSHLLIPIRKALHSTSPFSNFPNPLLRPNPLGWGGFHLGFSSSTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHAAAVTTTTTTTTTTSNSKLLLPNSNNSSSSFSIVGNTASNNNSNTISFGNCHEHKNVIQQQQPVASDASAANNISRMFMKKENNNANESCSSLLPMLPPNLDLKPKENPFMIHNNNHEFGVVTCDSLLNPSSNNKSNDSQNNSLRHFIDESTQLSISIPNHQFMPTNEKVTLSPLRVSSSRELELELVDPIQMGLGVGIGVNNNIVRQPNWIPISWESSMGGPLGEVLNLNNNNNSNNNNKGSMNLISSDGWDNSPSIGSSPTGVLQKTTAFGSLSNSSAGSSPRAADNNKGGAIL* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3411 613 ProSiteProfiles QLQ domain profile. 199 234 IPR014978 GO:0005524|GO:0005634|GO:0006355
Ahy16g3411 613 MobiDBLite consensus disorder prediction 590 613 - -
Ahy16g3411 613 MobiDBLite consensus disorder prediction 317 343 - -
Ahy16g3411 613 ProSiteProfiles WRC domain profile. 269 313 IPR014977 -
Ahy16g3411 613 Pfam WRC 270 312 IPR014977 -
Ahy16g3411 613 MobiDBLite consensus disorder prediction 298 343 - -
Ahy16g3411 613 Pfam QLQ 200 233 IPR014978 GO:0005524|GO:0005634|GO:0006355
Ahy16g3411 613 SMART QLQ_2 198 234 IPR014978 GO:0005524|GO:0005634|GO:0006355
Ahy16g3411 613 MobiDBLite consensus disorder prediction 30 49 - -
Ahy16g3411 613 PANTHER GROWTH-REGULATING FACTOR 9 15 606 - -
Ahy16g3411 613 PANTHER - 15 606 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3411 Ahy-Chr16 151246883 151251946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3411 1 607 GRF Transcription Factor Family AT2G22840 36.909 2.83e-79 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Ahy16g3411 WRC 5.70E-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3411 - - aip:107605578 999.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3411 16 151246883 151251946 Ahy16g3411 16 151246883 151251946 ECH
Ahy16g3411 16 151246883 151251946 Ahy6g2674 6 112203193 112208260 hybridization