Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3409 ATGAAGTCTTTCTTGAATGATGGAAACAATACTACTACTGCTACTACTACTAATCATGATGATGATAGTAACAATCATAACTGGTTGATGGGTTTCTCTCTCTCACCCCACCACCACCACAACATGAAAATGGAGGTTCCCAATGATCATAATCATAATCATCATCATCATCATCATCACCATCAGTATTATCATCATCTTCATCATCCTTCAAGCACTGCCTCAACAACAAGTAGCTTATTCTACTTGTCACCTTCACAGTTGAATAATCCTTCTTCAACAATGTGTTATGCTGAAAACCCTTCTCCCTTTCATTCTTCTCCTTCTCTGGCTATGATGCCACTCAAATCTGATGGCTCACTCTGCATAATGGAAGCTCTCACTACATCACAAACCCAAGTGATGGTGCCAAGTTCTTCATGTTCATCTCCAAAGCTTGAGGACTTTCTAGGTGGTGCAACAATGGGAGCTCATGAATATGGTGAACATGAAAGAGAAGCAATGGCTCTAAGCTTAGACAGCATTTACTATAACAATAGCCATCATCATCATCATCAAAATTCTGAGGCTGAAAACAACAACAGACAACAACATTGTTCTTCTAATTCTTCTTTGGACCTTATTCTCTCAGACCCTTTTAAGCAACAAGGGCATAATAGTAATAATCATCATCATGAACATGATCATGATGTGAATCAATACTATTCAGCACTTGGCTGCAGCAATGATGGTTCTACTAACATTCTACCATTTGTTGAAGAAGAAGAAGAAGAAACAACAAAGGAACCTCATCATCAAATGCATCAAGAACAAGAGAATAATAATTGCTTCATCAGAAACTGGGTTAATGGAAATAATAATAATAATAATAATAATAATAATGGAATGGTGGAAAGTGTTAATGTGAATGTTAATGGTGGAGGTGGGAATTTGAAGACTTTAAGTCTTTCAATGAGTCCTGGTTGTTCATCTACTTCTCAATCATCATCAAGCCATGTAAGTGTTTCAACAACTACTCATAATCATAATCAGATCTCAGCAGGTTCTTCTTCTTCAAATTCTTGCAAGGCCATGGTGGAAGTTGCAAAGAATAATAAGAGAGGACACAATAATAGTAGTAAGCAAACTGTTCATAGGAAATCCATTGAGACATTTGGTCAAAGAACTTCACAGTACAGAGGTGTCACAAGGCATAGATGGACCGGCAGATATGAAGCACATTTGTGGGATAATAGTTGCAAAAAAGAAGGGCAAACTAGGAAAGGAAGACAAGGTGGCTATGATATGGAAGAAAAAGCTGCAAGGGCTTATGATCTTGCAGCCCTTAAGTATTGGGGACCTTCAACACACATAAACTTTCCGCTAGAAAACTACCAAAATGAACTTGAAGAAATGAAGAACATGAACAGGCAGGAATATGTTGCACATTTGAGAAGAAAAAGTAGTGGATTTTCAAGGGGAGCTTCAATGTATAGAGGGGTGACAAGGCACCACCAACATGGGAGATGGCAAGCAAGGATAGGCAGAGTAGCGGGAAATAAGGACCTTTATCTTGGGACATTCAGTACTCAAGAAGAAGCAGCAGAAGCATATGATGTGGCTGCAATCAAATTCCGTGGGGTGAATGCAGTCACAAACTTTGACATTTCAAGATATGATGTTGAAAGGATCATGGCTAGTAACACCCTACTTGCCGGAGAATTGGCCAGAAAGAACAACAACGAGCAGCCGAAGGCGATCGAGGCGGCGCCGGCACCGGCACCGGCAACAACCCTAGAGTACAATGTTGTAACAAGCCACATCAACAAGAAGGAGTTGGTAGAAGTTGAAGGTTGTAACAACAACAACATTGAAAATGGTTCAGATGAATGGAAGAAGATTGGATTTAATGATGATTATAGAAATTGTCAAACTTTCTGTGGTGGTGGGGCCCTACAAGATCTAATTGGCATTCAAAACCCTAATATGGGAGGAGGGACTCATTTTTCAAACCCATCTTCACTAGTGACAAGTTTGAGCAACTCATCAAGAGAAGGTAGCCCTGTTCACAACATGAACAAGAACAACAATAGTAGTCATCATCAAAATGTGTTTCATCAAAAGGTTAATAATAATAATAATGTTGTTAGCCCTATTATTGTTGCCAATAATACTAGTACTACTAGTGTTGTTAGTTCTTGGTTCCCTTCACCACCTCCTCAAATTAGGTCTACTATGTCTCCCATGCCCATTTTTGCGGCTTGGACTGAACCCTAG 2256 0.3936 MKSFLNDGNNTTTATTTNHDDDSNNHNWLMGFSLSPHHHHNMKMEVPNDHNHNHHHHHHHHQYYHHLHHPSSTASTTSSLFYLSPSQLNNPSSTMCYAENPSPFHSSPSLAMMPLKSDGSLCIMEALTTSQTQVMVPSSSCSSPKLEDFLGGATMGAHEYGEHEREAMALSLDSIYYNNSHHHHHQNSEAENNNRQQHCSSNSSLDLILSDPFKQQGHNSNNHHHEHDHDVNQYYSALGCSNDGSTNILPFVEEEEEETTKEPHHQMHQEQENNNCFIRNWVNGNNNNNNNNNNGMVESVNVNVNGGGGNLKTLSLSMSPGCSSTSQSSSSHVSVSTTTHNHNQISAGSSSSNSCKAMVEVAKNNKRGHNNSSKQTVHRKSIETFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQNELEEMKNMNRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGVNAVTNFDISRYDVERIMASNTLLAGELARKNNNEQPKAIEAAPAPAPATTLEYNVVTSHINKKELVEVEGCNNNNIENGSDEWKKIGFNDDYRNCQTFCGGGALQDLIGIQNPNMGGGTHFSNPSSLVTSLSNSSREGSPVHNMNKNNNSSHHQNVFHQKVNNNNNVVSPIIVANNTSTTSVVSSWFPSPPPQIRSTMSPMPIFAAWTEP* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3409 751 MobiDBLite consensus disorder prediction 317 355 - -
Ahy16g3409 751 ProSiteProfiles AP2/ERF domain profile. 391 454 IPR001471 GO:0003700|GO:0006355
Ahy16g3409 751 Coils Coil 455 475 - -
Ahy16g3409 751 CDD AP2 489 550 IPR001471 GO:0003700|GO:0006355
Ahy16g3409 751 CDD AP2 390 454 IPR001471 GO:0003700|GO:0006355
Ahy16g3409 751 PRINTS Ethylene responsive element binding protein signature 530 550 IPR001471 GO:0003700|GO:0006355
Ahy16g3409 751 PRINTS Ethylene responsive element binding protein signature 392 403 IPR001471 GO:0003700|GO:0006355
Ahy16g3409 751 Pfam AP2 domain 391 446 IPR001471 GO:0003700|GO:0006355
Ahy16g3409 751 Pfam AP2 domain 491 540 IPR001471 GO:0003700|GO:0006355
Ahy16g3409 751 SMART rav1_2 391 460 IPR001471 GO:0003700|GO:0006355
Ahy16g3409 751 SMART rav1_2 490 554 IPR001471 GO:0003700|GO:0006355
Ahy16g3409 751 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 25 716 - -
Ahy16g3409 751 SUPERFAMILY DNA-binding domain 489 550 IPR016177 GO:0003677
Ahy16g3409 751 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 25 716 - -
Ahy16g3409 751 MobiDBLite consensus disorder prediction 181 201 - -
Ahy16g3409 751 MobiDBLite consensus disorder prediction 1 24 - -
Ahy16g3409 751 MobiDBLite consensus disorder prediction 52 67 - -
Ahy16g3409 751 MobiDBLite consensus disorder prediction 48 71 - -
Ahy16g3409 751 Gene3D AP2/ERF domain 390 456 IPR036955 GO:0003700|GO:0006355
Ahy16g3409 751 Gene3D AP2/ERF domain 490 550 IPR036955 GO:0003700|GO:0006355
Ahy16g3409 751 ProSiteProfiles AP2/ERF domain profile. 490 548 IPR001471 GO:0003700|GO:0006355
Ahy16g3409 751 SUPERFAMILY DNA-binding domain 390 456 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3409 Ahy-Chr16 151173862 151178835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3409 289 574 AP2-EREBP Transcription Factor Family AT4G37750 69.463 1.48e-131 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Ahy16g3409 AP2 5.40E-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3409 K09285 - gmx:100798179 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3409 16 151173862 151178835 Ahy16g3409 16 151173862 151178835 ECH
Ahy16g3409 16 151173862 151178835 Ahy6g2671 6 112142769 112147827 hybridization
Ahy16g3409 16 151173862 151178835 Ahy17g3196 17 133966592 133970358 PCT
Ahy16g3409 16 151173862 151178835 Ahy8g0905 8 17533198 17536420 PCT
Ahy17g3196 17 133966592 133970358 Ahy16g3409 16 151173862 151178835 PCT
Ahy8g0905 8 17533198 17536420 Ahy16g3409 16 151173862 151178835 PCT