Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3403 ATGGCGGATCCATATGTCCTAGGCTGGATCCTTGTCTCTGTTCTCAGCGTCTTCGCGCTCTACAGCTTAGTTTTCGCCGGAGGAAACCGCCGCCGTCGTGCTTCGCAGGAGAACGATGCTCAGCGTACGGGGAACGTGAAAACTTCCGTCGGAGAATGTGGATCCAAGAACCTCGATGGCAACGATGCTGACGTCATCGTCGTCGGAGCTGGCGTTGCTGGCGCGGCTCTTGCTTACACACTCGGCAAGGATGGACGGCGAGTACTTGTAGTTGAAAGAGATTTGAGTGAGCCTGACAGAATTGTTGGAGAGTTGCTACAACCTGGCGGCTATCTCAAATTGATTGAGCTGGGACTTGAAGATTGTGTGGAGGAAATCGATGCTCAGAGAGTGTTTGGTTATGCACTTTTCAAGGACGGAAAAAATACATGCCTCTCTTATCCCTTGGAAAAGTTTCAGTCAGATATCGCTGGTAGAAGCTTTCACAATGGCCGTTTTATTCAGAGGATGCGGGAAAAGGCTGCCACACTGCCCAATGTCCGGTTGCTGCAAGGGTCAGTCACTTCCTTGATTGAAGAAAAGGGGACAATTAAAGGTGTTCAGTACAAGACCAAAGATGGTCAGGAGCTGAAAGTACATGCACCTCTTACCGTTGTTTGTGATGGCGGCTTCTCAAACTTGCGCCGTTGTCTTTGTAATCCTAAGGTTGATATTCCCTCTCACTTCGTTGGCTTAATTCTAGAGAATTGCCAACTTCCATATGAAAATCATGGTCACGTCATACTCGGAGACCCTTCCCCAATTCTGTTCTATCGCATAAGTAGTACAGAGGTTCGTTGTTTGGTTGATGTACCTGGGCAGAAGGTTCCTTCTATCGCAAATGGTGAAATGGAGAAGTATTTGAAGACAATGGTGGCTCCACAGATCCCCGCTGAGCTCCATGATGCCTTTTTAGCTGCAGTTGAGAAAGGCAACATAAGGTCAATATCGAATAGAAGCATGCCAGCAGATCCCCTTCCTACCCCTGGAGCCATTTTGATGGGAGATGCCTTCAACATGAGGCATCCTCTAACAGGGGGTGGAATGACCGTGGCATTGTCAGACATTGTGGTGCTGAGAAATCTTCTCAGGCCCCTGAGTGACCTGAATGACGCACCCACACTCTGCAAATACCTTGAATCCTTTTACACCTTGAGAAAGCCTGTGGCATCAACCATAAATACATTAGCAGGTGCCTTGTACAAGGTCTTCTCTGCATCTCCAGATCAAGCAAGGAAGGAAATGCGCCAAGCTTGCTTTGATTATCTGAGCCTTGGAGGCCTATGTTCCCAGGGACCAATCTCATTACTCTCAGGACTAAACCCTCGTCCTTTGAGCTTGGTGGCTCATTTCTTTGCTGTTGCAGTGTATGGTGTTGGCCGCTTAATATTTCCCTTTCCCTCGCCCAAGAAGATATGGATTGGAGCTCGGTTAATCTCTGTTGAAATCGATGTCCCTGCGAGCTGA 1506 0.4834 MADPYVLGWILVSVLSVFALYSLVFAGGNRRRRASQENDAQRTGNVKTSVGECGSKNLDGNDADVIVVGAGVAGAALAYTLGKDGRRVLVVERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEEIDAQRVFGYALFKDGKNTCLSYPLEKFQSDIAGRSFHNGRFIQRMREKAATLPNVRLLQGSVTSLIEEKGTIKGVQYKTKDGQELKVHAPLTVVCDGGFSNLRRCLCNPKVDIPSHFVGLILENCQLPYENHGHVILGDPSPILFYRISSTEVRCLVDVPGQKVPSIANGEMEKYLKTMVAPQIPAELHDAFLAAVEKGNIRSISNRSMPADPLPTPGAILMGDAFNMRHPLTGGGMTVALSDIVVLRNLLRPLSDLNDAPTLCKYLESFYTLRKPVASTINTLAGALYKVFSASPDQARKEMRQACFDYLSLGGLCSQGPISLLSGLNPRPLSLVAHFFAVAVYGVGRLIFPFPSPKKIWIGARLISVEIDVPAS* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3403 501 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 356 372 - -
Ahy16g3403 501 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 341 356 - -
Ahy16g3403 501 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 213 228 - -
Ahy16g3403 501 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 64 86 - -
Ahy16g3403 501 SUPERFAMILY FAD/NAD(P)-binding domain 63 437 IPR036188 -
Ahy16g3403 501 Pfam NAD(P)-binding Rossmann-like domain 67 93 - -
Ahy16g3403 501 Gene3D - 56 435 IPR036188 -
Ahy16g3403 501 PANTHER SQUALENE MONOOXYGENASE 1 493 IPR040125 GO:0004506|GO:0016126
Ahy16g3403 501 Pfam Squalene epoxidase 213 486 IPR013698 GO:0004506|GO:0016021|GO:0050660
Ahy16g3403 501 PANTHER SQUALENE MONOOXYGENASE-RELATED 1 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3403 Ahy-Chr16 151060309 151065185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3403 45 493 Miscellaneous Gene Families AT1G58440 76.889 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3403 K00511 - gmx:100804406 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3403 16 151060309 151065185 Ahy16g3403 16 151060309 151065185 ECH
Ahy16g3403 16 151060309 151065185 Ahy6g2665 6 112060655 112065496 hybridization