Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3399 ATGTCTCGGAGGCCGGTGAATCCTTCGAGAAGGTTCGGAGACAGTGGCGGTGGATTGTTCTCAAGTTCGAAATCGAGGTCCTCGTCAATTTTGCCTATTGGCCTCGTAGTCTTGGGTGGTCTGTTTTTCATTGTCTATATGCATAAGGGATCAGGTGGATCTGGTGGTCACTTAGATTCTGTTAGCAGGATTGAAGGTGATTATTTGTGCAGTGGAGAGGTCCAACAAGCCATTCCTATTTTACAGAAAGCATATGGAGATAGCATGCATAAAGTTTTGCATGTTGGACCTGATAGTTGTTTTGTGGTCTCCAAATTGTTAAGGCAGGAGGAAACTGAAGCTTGGGGAATTGAACCGTACGATATAGAGGATGCCGATAGTAATTGCAAAGCACTTATCCGTAGAGGCAGTGTGCGTGTGGCAGATATCAAGTTTCCTCTTCCATACAGGCCAAAATCTTTCTCACTTGTAGTCGTTTCAGATGCTCTGGATTACTTATCTCCCAGATACCTCAATAAAACACTTCCTGATTTGGCAAGGGTATCAGCAGATGGTATAGCGATATTTACTGGCTTTCCGACTCAACAAAAGGCCAAGGTTGCAGATGTTTCTAAGTTTGGAAGAGCGGCCAAGATGAGAAGCTCATCCTGGTGGACCAAGTTTTTCGCTCAGATTAACTTAGAAGAGAATGAATCTGCTTCTAAGAAGTTTGAACAAGCTTCAACAAAGGGCTCATATGAACCAAAATGCCAGATATTCCACCTAAAGTCCCTCCCTTGA 780 0.4372 MSRRPVNPSRRFGDSGGGLFSSSKSRSSSILPIGLVVLGGLFFIVYMHKGSGGSGGHLDSVSRIEGDYLCSGEVQQAIPILQKAYGDSMHKVLHVGPDSCFVVSKLLRQEETEAWGIEPYDIEDADSNCKALIRRGSVRVADIKFPLPYRPKSFSLVVVSDALDYLSPRYLNKTLPDLARVSADGIAIFTGFPTQQKAKVADVSKFGRAAKMRSSSWWTKFFAQINLEENESASKKFEQASTKGSYEPKCQIFHLKSLP* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3399 259 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 84 195 IPR029063 -
Ahy16g3399 259 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 258 IPR044689 GO:0008168|GO:0045488
Ahy16g3399 259 PANTHER PROTEIN, PUTATIVE-RELATED 1 258 - -
Ahy16g3399 259 MobiDBLite consensus disorder prediction 1 26 - -
Ahy16g3399 259 Gene3D Vaccinia Virus protein VP39 76 251 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3399 Ahy-Chr16 151034070 151037898 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3399 K23871 - gmx:100805476 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3399 16 151034070 151037898 Ahy16g3399 16 151034070 151037898 ECH
Ahy16g3399 16 151034070 151037898 Ahy6g2662 6 112037342 112041199 hybridization
Ahy16g3399 16 151034070 151037898 Ahy17g3191 17 133887956 133890873 PCT
Ahy16g3399 16 151034070 151037898 Ahy8g0901 8 17460573 17463280 PCT
Ahy17g3191 17 133887956 133890873 Ahy16g3399 16 151034070 151037898 PCT
Ahy8g0901 8 17460573 17463280 Ahy16g3399 16 151034070 151037898 PCT