Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3392 ATGAAGAGTTTGTGTGCTTGCTTCTTCACAAGCAGTGTCTTCAACTCTCACTCCCACTCTCACTGGAACCATAACCATTCTCATTCTCATTCTCAATCTCAGATCATGGCGGGAAGCATCTCTGGTCCGAGTGGGGGCAATGCCGCTAACATTTTACTGAATCATGACTTCTCCGGAGGGTTGGATTCTTGGCATGTCAATTGCTGCGACGGCTATGTAGTTTCAGCTGAAGAAGTTTCCCAATTAGGAATATCAATGGAGACAGATGGTAATTGTGCTGTTATCACCAGCCGAAAAGAATGCTGGCAAGGTCTCGAGCAAGACATCACAAGCAGAGTTTCCATTGGCTCCACTTACATAGTTTCAGCTCTTGTTGGAATATCCGGCCTGTCTCAGGGATCTAATGATGTCCAAGCTACTCTGAAACTTGAATATCACGATTCGGCTACTAGTTACTTGTTCATTGGAAGAACTTCTGTTACAAGGGGAAACTGGAAAAAGCTGGAAGGGACATTTTCATTGTCAACTATGCCAAAACGAGTTGTATTTTATTTGGAAGGACCTGCTCCTGGAGTTGATATACTCATTCGCCCAGTAGAGATCGGCTGTTCAAATCCGAACAACAATATTGCAAGAACTGGATGTGTTTCTACTGGAGAAGATAATATCGTAATAAACCCGCAATTTGATGATGGCTTGAACAATTGGTCCGGAAGAGGCTGTAAGATTGCATTGCATGATTCCATGGGAGATGGGAAAATTCTACCTAAGTCTGGCAAGTTCTTTGCATCAGCGACTGAACGTACACAAAGCTGGAATGGAATTCAGCAGGATATCACCGGAAGAGTGCAGCGCAAGCTCGCCTACGAGGTCACTACTTCAGTTCGAATATTTGGAAACAATGTCACTACTGCTGATGTTCGCGCTACTTTGTATGTCCAAACATCAGATCTTCGAGACCAGTACATCGGCATTGCCAATGTGCAGGCAACAGACAAAGATTGGATTGATATGCAGGGAAAGTTCCTTCTAAATGGATCCCCATCAAAAGTGGTAATTTATTTAGAGGGTCCTCCGCCGGGTACTGACATTCTTGTTAATAGTTTGGTTGTAAAGCGTGCGCCTAAGACACCTCCATCAACACCACCGGACATAAAGGGTGTTGCTTTTGGGGTTAATGTAATTGAGAACAGCAATCTGGCTGATGGCACTAATGGATGGTATCCCCTTGGTAACTGCACATTGAGTGTTAAAACCGGCTCGCCACATATAATGCCGCCGATGGCAAGAGACTCTCTAGGACCACATGAGCTTCTAAGTGGACGCTACATACTTGTAACAAACCGCACACAAACATGGATGGGTCCTGCTCAGACTATCACTGATAAATTGAAACTCTTTGTGACTTATCAAGTATCGGCTTGGGTTCGGCTTGGTTCAGGATCATCCGGGCCACAGAATGTGAATGTTGCCCTTGGTGTTGACAACCAGTGGGTCAATGGAGGACAAACTGAGGTATCCGATCAAAGATGGCATGAAATCGGTGGGTCGTTTAGAATCGAAAAGCAGCCATCAAAGGTTATGGTTTATGTCCAAGGTCCTGCTTCAGGTGTTGACTTAATGGTTGCTGGACTTCAAATTTTTCCTGTTGATAGACATGCAAGGTTTAAATATCTAAAGTCTCAAACAGACAAGATCCGAAAGCGTGATGTTACCCTGAAATTCTCCGGACTGGATGCAAGCAACTACTCGAAAACCTCAGTGCAAGTCAGACAAATTCAGAATAATTTTCCAGTTGGAACATGCATCAGCAGGATGAACATTGACAATGAGGATTTTGTAGACTTCTTTGTGAAACATTTTAACTGGGCTGTGTTTGGTAATGAGTTGAAATGGTACTGGACCGAGCCGCAACAGGGGAATTTCAACTACAAGGATGCAGATGATCTCTTAAACTTGTGTCAGAAGAACAAGATAGAAACTCGCGGCCATTGTATCTTCTGGGAAGTGGATGGAACCGTCCAGCAATGGATTAAAGCGCTGAACAAAACTGACCTCATGGCGGCCGTCCAGAACAGATTAAACGGCCTGCTTACTCGGTATAAAGGCAAGTTCAATCACTATGATGTTAACAATGAAATGCTGCATGGTTCATTTTACCAGGACAGGTTAGGTAAGGACATAAGGGCCAACATGTTTAAGACTGCGAATCAACTTGATCCGGCCGCTACCCTTTTCGTGAATGATTATCACGTGGAAGATGGATGTGACACCAGATCATGTCCGGAAAAATACATTGAACATATTCTTGATTTGCAAGAACAGGGGTCCCCTGTTGGTGGAATTGGAATTCAAGGCCATATAGATAGTCCGGTTGGGCCTATCGTTTGTTCATCCCTTGATAAACTGGGAATTCTTGGCTTACCTATATGGTTCACCGAGCTAGATGTGTCGTCGACTAACGAATATGTTAGAGCAGACGATTTGGAAGTTATGTTGAGGGAAGCCATGGCTCACCCGGCCGTCGAAGGCCTAATGCTGTGGGGATTTTGGGAGTTGTTCATGAGCCGGGACAACTCTCACTTGGTTAATGCAGAAGGTGAAATCAATGAAGCTGGAAAAAGGTTCCTTGCTCTTAAGCAAGAATGGCTTTCTCATAGCCATGGAAATGTTGATCAGCAAGGTCAATACAACTTTAGAGGCTTTCATGGAACATACAAGGTTGATATTGTCATTGATACAAAGAAAGTTTCCAAGACCTTTGTCCTTGACAAGGGTGACTCTCCAATGGTGGTTTCCATAGACTTCTAA 2811 0.4404 MKSLCACFFTSSVFNSHSHSHWNHNHSHSHSQSQIMAGSISGPSGGNAANILLNHDFSGGLDSWHVNCCDGYVVSAEEVSQLGISMETDGNCAVITSRKECWQGLEQDITSRVSIGSTYIVSALVGISGLSQGSNDVQATLKLEYHDSATSYLFIGRTSVTRGNWKKLEGTFSLSTMPKRVVFYLEGPAPGVDILIRPVEIGCSNPNNNIARTGCVSTGEDNIVINPQFDDGLNNWSGRGCKIALHDSMGDGKILPKSGKFFASATERTQSWNGIQQDITGRVQRKLAYEVTTSVRIFGNNVTTADVRATLYVQTSDLRDQYIGIANVQATDKDWIDMQGKFLLNGSPSKVVIYLEGPPPGTDILVNSLVVKRAPKTPPSTPPDIKGVAFGVNVIENSNLADGTNGWYPLGNCTLSVKTGSPHIMPPMARDSLGPHELLSGRYILVTNRTQTWMGPAQTITDKLKLFVTYQVSAWVRLGSGSSGPQNVNVALGVDNQWVNGGQTEVSDQRWHEIGGSFRIEKQPSKVMVYVQGPASGVDLMVAGLQIFPVDRHARFKYLKSQTDKIRKRDVTLKFSGLDASNYSKTSVQVRQIQNNFPVGTCISRMNIDNEDFVDFFVKHFNWAVFGNELKWYWTEPQQGNFNYKDADDLLNLCQKNKIETRGHCIFWEVDGTVQQWIKALNKTDLMAAVQNRLNGLLTRYKGKFNHYDVNNEMLHGSFYQDRLGKDIRANMFKTANQLDPAATLFVNDYHVEDGCDTRSCPEKYIEHILDLQEQGSPVGGIGIQGHIDSPVGPIVCSSLDKLGILGLPIWFTELDVSSTNEYVRADDLEVMLREAMAHPAVEGLMLWGFWELFMSRDNSHLVNAEGEINEAGKRFLALKQEWLSHSHGNVDQQGQYNFRGFHGTYKVDIVIDTKKVSKTFVLDKGDSPMVVSIDF* 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3392 936 SUPERFAMILY Galactose-binding domain-like 391 551 IPR008979 -
Ahy16g3392 936 Gene3D - 216 373 - -
Ahy16g3392 936 Gene3D - 45 202 - -
Ahy16g3392 936 Gene3D - 389 548 - -
Ahy16g3392 936 PANTHER GLYCOSYL HYDROLASE 210 935 IPR044846 GO:0004553|GO:0005975
Ahy16g3392 936 Coils Coil 862 882 - -
Ahy16g3392 936 SMART glyco_10 630 880 IPR001000 GO:0004553|GO:0005975
Ahy16g3392 936 PANTHER GLYCOSYL HYDROLASE 48 199 IPR044846 GO:0004553|GO:0005975
Ahy16g3392 936 Gene3D Glycosidases 581 890 - -
Ahy16g3392 936 SUPERFAMILY Galactose-binding domain-like 220 375 IPR008979 -
Ahy16g3392 936 SUPERFAMILY Galactose-binding domain-like 49 205 IPR008979 -
Ahy16g3392 936 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE PROTEIN 210 935 - -
Ahy16g3392 936 Pfam Carbohydrate binding domain 49 190 IPR003305 GO:0016798
Ahy16g3392 936 Pfam Carbohydrate binding domain 221 358 IPR003305 GO:0016798
Ahy16g3392 936 Pfam Carbohydrate binding domain 393 536 IPR003305 GO:0016798
Ahy16g3392 936 SUPERFAMILY (Trans)glycosidases 584 887 IPR017853 -
Ahy16g3392 936 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE PROTEIN 48 199 - -
Ahy16g3392 936 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 584 879 IPR001000 GO:0004553|GO:0005975
Ahy16g3392 936 Pfam Glycosyl hydrolase family 10 593 850 IPR001000 GO:0004553|GO:0005975
Ahy16g3392 936 ProSitePatterns Glycosyl hydrolases family 10 (GH10) active site. 807 817 IPR031158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3392 Ahy-Chr16 150874061 150879457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3392 45 936 Glycoside Hydrolase AT1G58370 70.089 0.0 1311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3392 - - lja:Lj0g3v0316669.1 1615.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3392 16 150874061 150879457 Ahy16g3392 16 150874061 150879457 ECH
Ahy16g3392 16 150874061 150879457 Ahy6g2655 6 111862672 111868134 hybridization
Ahy16g3392 16 150874061 150879457 Ahy17g3184 17 133696011 133706381 PCT
Ahy16g3392 16 150874061 150879457 Ahy8g0893 8 17254573 17265356 PCT
Ahy17g3184 17 133696011 133706381 Ahy16g3392 16 150874061 150879457 PCT
Ahy8g0893 8 17254573 17265356 Ahy16g3392 16 150874061 150879457 PCT