Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3389 ATGGATTTCATGAAGGTCTTCGATCAAACCGTTCGAGAAATAAAGAGAGAGGTGAATCTGAAGGTGCTAAAGGTTCCCGAGATCGAACAGAAGGTGTTGGATGCAACTGATAATGAACCTTGGGGTCCTCATGGTTCTGCACTGGCAGAGATTGCACTGGCTACCAAAAAATTTACTGAATGTCAAATGGTCATGAATGTCCTTTGGACAAGATTGGCTGAAACTGGAAAAGATTGGCGCTATGTTTACAAGGCATTAGCTGTTATAGAGTATTTGGTAGCACATGGGTCTGAACGTGCAGTTGATGACATTATAGAGCATACATTTCAAATCTCAGCACTTTCTAGCTTTGAATATGTTGAGCCTAGTGGTAAGGATTCGGGACTAAATGTCAGGAAGAAGGCAGAAACCATTGTGGCCCTTTTAAATAATAGAGAAAAGATACAGGAAGTGAGAAATAAAGCTGCTGCAAACCGTGACAAATACGTCGGAGTTTCTTCTAGTGGAATCACGTACAAGTCTGGGTCAACCTCATTTAGTAGTGGCAGCTATCAGAGCAGTGGTAAATATTCGGGCTTTGGTTCAAATGATGGTGATAGGTTTAGGGATAGCTACAGAGACAAGGGAGACTATGAAGAAGACAAATACACTAGAAGATCACGAAACATCGGTGACGATGAAGAGAACTCCTTCAAAAAGGGTACTGCACACTCTGTCAGCAAAAGTCAGGAGAATGCACCATCCAGAGTATCTAAGTCATCTACTACTAATGCCCAAGATAATTACAGTTCAGTTGCTTCTCAAAGTTCAAGTGCACCTGCAAATAATACCGAGGATGACTTTGACGACTTTGATCCAAGAGGAACTTCTGCTAAGCCTTCGGCTGGAAGCTCTAATCAAGTTGATCTCTTTGGACAAGATTTAATCAGTGACTTCATGGATGCTCCAACATCTGTTTCTACAGAAAAGGCTGCTGCTAATAGTGTTTCAGAGGTTGATCTATTTGCAGATGCTTCATTTGTATCGGCACCACCTAATGTGGACAAGGGAGCTAGTTCTCAACCTCAGGAAGAAGTGGATCTATTTGCATCACAGCCAGCCATTCCTTCAGTTACACCAACAGTTGACTTGTTTTCCATTCCTAAACCAGTTGCACAGCCAGACAAGAAGTCAGGAAATTCTGCTTCAGCGAATAGTAGCACTTTTGATCCCTTTGCTGTTTCTGAACCAGTTGTGCATACAGATGCAGGAAATTCTGCTCCTGTGAATAATAGCACTTTTGATCCCTTTGCCATTCCTGAACCAGTTGCGCAGCCTGACAATAAGTCAGGAAATTCTGCTCCTGTGAACAATAGCACTTTCGACCCCTTTGCTGCTATTCCACTTAATAATTTTGATGGATCTGATGTTTTTGGTGATTTTACTTCTCAACCTGATTCAGCATCTTCACAGACCTCCAATAATGTTGCCAGTGACATCAGCCATGATAAGATGAGTGGTAAAACTTCAGTAGACTCTAAAGTTTCACCTAAAAAGGATCCATTCCAGGTGAAATCTGGCATCTGGGCAGATTCACTTAGCCGTGGACTGATTGATCTCAATATATCTGGCCCCAAGAAAGTAAATCTTGCAGATGTTGGGATTGTGGGTGGATTAAGTGATGGATCAGATGAAGTGGTGAAAGGCCCTCCACCTTCATTTTACATGGGTAGAGCTATGGGTTCAGGTTCTGGTCTTGGTAGATCTGGATTCACTCCTTCACAGACAGAAACCGGAAATGACATGTTCTCAAGCCTTAGCAGCCAACAATATCAATTTGGTGGATTCCAGAAGTAA 1836 0.4232 MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDNEPWGPHGSALAEIALATKKFTECQMVMNVLWTRLAETGKDWRYVYKALAVIEYLVAHGSERAVDDIIEHTFQISALSSFEYVEPSGKDSGLNVRKKAETIVALLNNREKIQEVRNKAAANRDKYVGVSSSGITYKSGSTSFSSGSYQSSGKYSGFGSNDGDRFRDSYRDKGDYEEDKYTRRSRNIGDDEENSFKKGTAHSVSKSQENAPSRVSKSSTTNAQDNYSSVASQSSSAPANNTEDDFDDFDPRGTSAKPSAGSSNQVDLFGQDLISDFMDAPTSVSTEKAAANSVSEVDLFADASFVSAPPNVDKGASSQPQEEVDLFASQPAIPSVTPTVDLFSIPKPVAQPDKKSGNSASANSSTFDPFAVSEPVVHTDAGNSAPVNNSTFDPFAIPEPVAQPDNKSGNSAPVNNSTFDPFAAIPLNNFDGSDVFGDFTSQPDSASSQTSNNVASDISHDKMSGKTSVDSKVSPKKDPFQVKSGIWADSLSRGLIDLNISGPKKVNLADVGIVGGLSDGSDEVVKGPPPSFYMGRAMGSGSGLGRSGFTPSQTETGNDMFSSLSSQQYQFGGFQK* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3389 611 PANTHER EPSIN/ENT-RELATED 420 602 - -
Ahy16g3389 611 MobiDBLite consensus disorder prediction 235 277 - -
Ahy16g3389 611 PANTHER CLATHRIN INTERACTOR EPSIN 1 1 408 IPR033521 GO:0006623|GO:0030276
Ahy16g3389 611 SUPERFAMILY ENTH/VHS domain 7 152 IPR008942 -
Ahy16g3389 611 MobiDBLite consensus disorder prediction 380 402 - -
Ahy16g3389 611 Pfam ENTH domain 27 147 IPR013809 -
Ahy16g3389 611 Gene3D - 24 164 IPR008942 -
Ahy16g3389 611 MobiDBLite consensus disorder prediction 564 597 - -
Ahy16g3389 611 MobiDBLite consensus disorder prediction 176 193 - -
Ahy16g3389 611 PANTHER EPSIN/ENT-RELATED 1 408 - -
Ahy16g3389 611 SMART enth_2 26 152 IPR013809 -
Ahy16g3389 611 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
Ahy16g3389 611 MobiDBLite consensus disorder prediction 471 511 - -
Ahy16g3389 611 CDD ENTH 28 144 - -
Ahy16g3389 611 MobiDBLite consensus disorder prediction 176 302 - -
Ahy16g3389 611 MobiDBLite consensus disorder prediction 199 234 - -
Ahy16g3389 611 MobiDBLite consensus disorder prediction 471 497 - -
Ahy16g3389 611 PANTHER CLATHRIN INTERACTOR EPSIN 1 420 602 IPR033521 GO:0006623|GO:0030276
Ahy16g3389 611 MobiDBLite consensus disorder prediction 580 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3389 Ahy-Chr16 150841787 150848123 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3389 K12471 - gmx:100809198 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3389 16 150841787 150848123 Ahy16g3389 16 150841787 150848123 ECH
Ahy16g3389 16 150841787 150848123 Ahy6g2652 6 111836774 111843517 hybridization