LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy16g3331	ATGGCCTCTTCAGAAATATACTACTCTAATTTGCAAGCTCTAACACAAGAAGAATTGGCTGAACTTGACCCAATCATAAAAAAATATCACATTTTCAATGATCCCTCCCCAAACACGTGCACTTCGATAATAACCTACCGGATCGAAGCTCCGGCGAACGCGGTATGGCCGTTCGTCCGAAGCTTCGAGAATCCCCAGAAGTACAAGCACTTCATAAAGGGGTGCAATATGAGAGGAGATGGCGGCGTTGGCAGCATCAGGGAGGTAACCGTCGTTTCGGGCCTCCCAGCATCAACCAGTACTGAGAGGCTCGAAATTTTAGACGATGACCTCCACATACTGAGCTTTAAGGTAGTTGGAGGCGAACATCGCCTCCAAAACTACCGCTCGGTAACGTCGGTTAACGAATTCAACATAGGAAACAGGGCTTATACAATTGTTTTGGAGTCTTATATTGTGGATATACCACAAGGGAACACCGAAGAAGATACCAAGATGTTTGTTGATACCGTTGTTAAGCTCAACCTTCAGAAACTTGGTGTGGTTGCCATGGCTAGTTGA	561	0.4581	MASSEIYYSNLQALTQEELAELDPIIKKYHIFNDPSPNTCTSIITYRIEAPANAVWPFVRSFENPQKYKHFIKGCNMRGDGGVGSIREVTVVSGLPASTSTERLEILDDDLHILSFKVVGGEHRLQNYRSVTSVNEFNIGNRAYTIVLESYIVDIPQGNTEEDTKMFVDTVVKLNLQKLGVVAMAS*	187

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy16g3331	186	PANTHER	-	16	185	-	-
	Ahy16g3331	186	Pfam	Polyketide cyclase / dehydrase and lipid transport	47	179	IPR019587	-
	Ahy16g3331	186	SUPERFAMILY	Bet v1-like	40	179	-	-
	Ahy16g3331	186	Gene3D	-	5	186	IPR023393	-
	Ahy16g3331	186	CDD	PYR_PYL_RCAR_like	47	179	-	-
	Ahy16g3331	186	PANTHER	ABSCISIC ACID RECEPTOR PYL2-LIKE	16	185	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy16g3331	Ahy-Chr16	150274855	150275821	Dispersed/Wgd

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy16g3331	K14496		-	gmx:100778183	305.834

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy16g3331	16	150274855	150275821	Ahy16g3331	16	150274855	150275821	ECH
	Ahy16g3331	16	150274855	150275821	Ahy6g2623	6	111506491	111507383	hybridization
	Ahy16g3331	16	150274855	150275821	Ahy17g3168	17	133503684	133504757	PCT
	Ahy16g3331	16	150274855	150275821	Ahy8g0880	8	17085543	17086438	PCT
	Ahy17g3168	17	133503684	133504757	Ahy16g3331	16	150274855	150275821	PCT
	Ahy8g0880	8	17085543	17086438	Ahy16g3331	16	150274855	150275821	PCT

Showing 1 to 6 of 6 entries