Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0439 ATGGGTAGGGCACCTTGCTGTGATAAAGCAAACGTGAAGAAAGGGCCCTGGTCGCCAGAAGAAGATGCCAAACTCAAATCCTACATCGAACAGCACGGCACCGGTGGTAACTGGATTGCTTTGCCTCAAAAGATCGGACTTAAGCGATGTGGCAAGAGTTGCCGTCTGAGGTGGCTAAACTATCTCCGCCCTAACATCAAGCACGGAGGCTTCTCCGAAGAAGAAGACAACATTATTTGCAGCCTTTACATTAGTATTGGAAGCAGGTGGTCGGTGATTGCAGCTCAGTTGCCAGGTAGAACTGATAACGACATAAAGAACTACTGGAACACCAGACTGAAGAAGAAGCTTCTCGGGAAGCACCGCAAAGAGCAGCAACAACAAGCACAAGCACGTAATACTAATACTAATACTAATACTAATAATAGAGGCCACTTGAACAACCGCGGAATTGGCAATGATAATATTGGGGATTCCTCATCATCATCATCCTTATTACCAATGGTTCCGGAAAATAGTACTACTCCTCAACAACCATATTACTGCCCAGTAGTGCTACCACCGGTTCCATACACAACACCGAATAATCAATTATTAGGACCGAGTTTCAACGACCAAGACTCTATTAGGAAACTTCTCATCAAGCTTGGAGGCAGATTCTCCGACCATGATTTTCAACCTCCTACTACCCTGCTTGATGGGGTACTACTGATGAATAGCAATAATAATAATCTTGACCATCAATTCCCAGTTGTTTCTCCATCCGCACAAGAAGCCCATGTTAACAACAACAGCAACAAAGTTGTACAATTCTCACAGATGAGTAATAGCAGTAATCAGTACTGTTGTGAGGAGGTAGTGCAGGGACAAGGCGGCATCAATAATTTCAGCGCAGCAATTGGGGAAGAAATGGTATCTAATTATCCGCAAAGATTATTGGATCATGGTGGGATGGAGTTTTTCTATGGGGAGGACATGGTGGTCACTGATAGTAATAAGCTAATAGGCACTACTGCAATTACTACTACTACTGCTGATAACTGGGGTGAGACCTACTGCAGCACAAAGATCTATCCTGAGACGCCTCAAGAATGTGTTTTCCAACACTACTACCCCGGGCCCCAATAG 1128 0.4441 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYISIGSRWSVIAAQLPGRTDNDIKNYWNTRLKKKLLGKHRKEQQQQAQARNTNTNTNTNNRGHLNNRGIGNDNIGDSSSSSSLLPMVPENSTTPQQPYYCPVVLPPVPYTTPNNQLLGPSFNDQDSIRKLLIKLGGRFSDHDFQPPTTLLDGVLLMNSNNNNLDHQFPVVSPSAQEAHVNNNSNKVVQFSQMSNSSNQYCCEEVVQGQGGINNFSAAIGEEMVSNYPQRLLDHGGMEFFYGEDMVVTDSNKLIGTTAITTTTADNWGETYCSTKIYPETPQECVFQHYYPGPQ* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0439 375 CDD SANT 71 113 IPR001005 -
Aev08g0439 375 PANTHER OS09G0431300 PROTEIN 1 329 - -
Aev08g0439 375 PANTHER TRANSCRIPTION FACTOR MYB36-LIKE 1 329 - -
Aev08g0439 375 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Aev08g0439 375 MobiDBLite consensus disorder prediction 128 174 - -
Aev08g0439 375 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Aev08g0439 375 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Aev08g0439 375 CDD SANT 16 62 IPR001005 -
Aev08g0439 375 Gene3D - 70 144 - -
Aev08g0439 375 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Aev08g0439 375 SMART sant 67 115 IPR001005 -
Aev08g0439 375 SMART sant 13 64 IPR001005 -
Aev08g0439 375 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Aev08g0439 375 MobiDBLite consensus disorder prediction 118 174 - -
Aev08g0439 375 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Aev08g0439 375 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Aev08g0439 375 Gene3D - 7 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0439 Aev-Chr8 2453046 2454538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0439 1 127 MYB Transcription Factor Family AT3G49690 91.339 1.71e-84 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev08g0439 Myb_DNA-binding 2.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0439 K09422 - gmx:778079 357.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0439 08 2453046 2454538 Aev08g0439 08 2453046 2454538 ECH
Aev07g0950 07 6855144 6857434 Aev08g0439 08 2453046 2454538 PCT